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Tables of mutating sites in Spike, updated daily

Last update: Dec 6, 2023

Dates of current data


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Collection dates: 2023-09-08 - 2023-12-05

Table 1A. Table of sites with common mutations, found with a frequency of >0.003. (Within the ACE2 contact region, the frequency threshold for inclusion is lower, >0.001.)

Note: The mutation D614G is not included in this summary; it is now the globally dominant form and can be readily tracked using many other tools at this site.

# of seqs: 184,890

oriposmutcountfrequency
L5F18690.0101087
I40.0000216
V70.0000379
X32820.0177511
Q14-280.0001514
A10.0000054
E100.0000541
H11390.0061604
K16520.0089350
L90.0000487
R7060.0038185
X22910.0123912
T19-80.0000433
F20.0000108
I1776730.9609660
L5460.0029531
N10.0000054
R770.0004165
V180.0000974
X57100.0308832
R21-610.0003299
A10.0000054
G770.0004165
I60.0000325
K150.0000811
S40.0000216
T71910.0388934
X35860.0193953
L24-1766380.9553681
I20.0000108
S440.0002380
X61310.0331603
P25-1767990.9562388
F10.0000054
H10.0000054
I10.0000054
Q10.0000054
S11090.0059982
X65630.0354968
Y70.0000379
P26-1776110.9606306
K10.0000054
L10.0000054
Q20.0000108
S140.0000757
X57850.0312889
A27-9950.0053816
L20.0000108
S1771410.9580886
V10.0000054
X49980.0270323
S50A10.0000054
L77420.0418735
P40.0000216
X69110.0373790
Q52H843920.4564444
K60.0000325
L50.0000270
P10.0000054
R1920.0010385
X79730.0431229
Y410.0002218
A67-60.0000325
D10.0000054
S4910.0026556
T60.0000325
V1590.0008600
X48060.0259938
H69-77140.0417221
D20.0000108
F30.0000162
L30.0000162
N60.0000325
P10.0000054
Q10.0000054
R40.0000216
S10.0000054
X56240.0304181
Y2710.0014657
V70-78240.0423171
A140.0000757
D20.0000108
F680.0003678
I320.0001731
L210.0001136
X54650.0295581
G75-130.0000703
A960.0005192
D370.0002001
E10.0000054
R240.0001298
S480.0002596
V3370.0018227
X47290.0255774
V83-120.0000649
A1642800.8885283
D10.0000054
F100.0000541
L10.0000054
P30.0000162
S820.0004435
T1190.0006436
X69050.0373465
T95-40.0000216
A450.0002434
I5110.0027638
N290.0001569
S80.0000433
X54000.0292066
V127-30.0000162
A10.0000054
F82230.0444751
G10.0000054
I110.0000595
X29050.0157120
G142-4130.0022338
A50.0000270
C10.0000054
D1805120.9763211
E10.0000054
H10.0000054
K10.0000054
M20.0000108
N40.0000216
Q20.0000108
R10.0000054
V10.0000054
X33260.0179891
Y70.0000379
V143-4200.0022716
A450.0002434
C10.0000054
D1610.0008708
F150.0000811
I60.0000325
K10.0000054
Q80.0000433
X26950.0145762
Y144-1686450.9121369
C20.0000108
D40.0000216
F220.0001190
I10.0000054
K40.0000216
L20.0000108
N30.0000162
Q1780.0009627
S120.0000649
X90070.0487155
Y145-4450.0024068
D90.0000487
H20.0000108
K650.0003516
L100.0000541
N650.0003516
P830.0004489
Q2300.0012440
R360.0001947
S20.0000108
T20.0000108
X37180.0201093
H146-8380.0045324
E170.0000919
K71230.0385256
L100.0000541
N120.0000649
P270.0001460
Q1585680.8576343
R30.0000162
T30.0000162
X46650.0252312
Y10.0000054
K147-1070.0005787
E33030.0178647
I250.0001352
N26190.0141652
Q80.0000433
R30.0000162
X22430.0121315
N148-40.0000216
D100.0000541
H90.0000487
K110.0000595
S300.0001623
T9160.0049543
X22300.0120612
Y140.0000757
W152-50.0000270
C10.0000054
F20.0000108
G40.0000216
L1120.0006058
R34620.0187246
X22200.0120071
M153-30.0000162
I5600.0030288
K50.0000270
L10.0000054
R80.0000433
T340.0001839
V770.0004165
X25390.0137325
E156-50.0000270
A50.0000270
D140.0000757
G11670.0063119
K20.0000108
Q640.0003462
V50.0000270
X25070.0135594
F157-11690.0063227
L261230.1412894
S81010.0438152
V10.0000054
X29510.0159608
Y20.0000108
R158-11680.0063173
G80700.0436476
I40.0000216
K280.0001514
S300.0001623
T320.0001731
X27670.0149657
L176-20.0000108
F5650.0030559
H10.0000054
P70.0000379
V230.0001244
X41950.0226892
E180-80.0000433
A20.0000108
D1500.0008113
G30.0000162
I40.0000216
K250.0001352
L20.0000108
Q660.0003570
V265110.1433880
X41260.0223160
G181-1050.0005679
A1220.0006599
E750.0004056
L10.0000054
R2220.0012007
V3560.0019255
X27580.0149170
K182-1200.0006490
E4570.0024717
I1380.0007464
N30830.0166748
Q5990.0032398
R230.0001244
T130.0000703
X28310.0153118
Q183-1300.0007031
A30.0000162
D790.0004273
E1678860.9080318
G340.0001839
H170.0000919
K370.0002001
R40.0000216
V100.0000541
X33120.0179134
G184-1300.0007031
A1030.0005571
C10.0000054
D910.0004922
I10.0000054
S5110.0027638
V10380.0056141
X28220.0152631
N185-1160.0006274
D61240.0331224
G10.0000054
I24430.0132133
K210.0001136
S1500.0008113
T90.0000487
V10.0000054
X30400.0164422
Y170.0000919
F186-24240.0131105
I30.0000162
L3560.0019255
S3450.0018660
V10.0000054
X29980.0162150
Y130.0000703
Y200-20.0000108
C22460.0121478
H10.0000054
N10.0000054
X24550.0132782
P209H30.0000162
L11210.0060631
S70.0000379
T50.0000270
X23450.0126832
I210-1470.0007951
A10.0000054
F90.0000487
S40.0000216
T2220.0012007
V34750.0187950
X21880.0118341
N211-79550.0430256
D20.0000108
E40.0000216
G30.0000162
H10.0000054
I990.0005355
K10.0000054
S140.0000757
X24080.0130240
Y30.0000162
L212-90.0000487
E10.0000054
F10.0000054
G20.0000108
I79590.0430472
S11860.0064146
X24580.0132944
V213-110.0000595
D1530.0008275
E1691980.9151279
G117990.0638163
H10.0000054
K70.0000379
Q30.0000162
R60.0000325
X25000.0135216
D215-10.0000054
A20.0000108
E10.0000054
G4260.0023041
H16800.0090865
N300.0001623
V740.0004002
X22460.0121478
Y1230.0006653
L216-10.0000054
F82370.0445508
I30.0000162
P20.0000108
X22940.0124074
A222D130.0000703
I10.0000054
P250.0001352
S990.0005355
T100.0000541
V13330.0072097
X22630.0122397
A243-12130.0065607
G20.0000108
S380.0002055
T50.0000270
V140.0000757
X173030.0935854
L244-12280.0066418
F230.0001244
I10.0000054
Q10.0000054
S50.0000270
X171470.0927416
H245-260.0001406
D10.0000054
N81950.0443237
R140.0000757
S20.0000108
X170450.0921900
Y4500.0024339
Y248-90.0000487
C40.0000216
F10.0000054
H6620.0035805
R10.0000054
X170570.0922549
G252-220.0001190
A60.0000325
D20.0000108
F120.0000649
I230.0001244
K10.0000054
N10.0000054
Q10.0000054
T70.0000379
V1437700.7775975
X173760.0939802
D253-160.0000865
A60.0000325
C10.0000054
E600.0003245
G118460.0640705
L10.0000054
N60.0000325
Q60.0000325
S10.0000054
V110.0000595
X174260.0942506
Y100.0000541
S256-100.0000541
A40.0000216
C10.0000054
L16940.0091622
P600.0003245
T520.0002812
X178750.0966791
Y10.0000054
G257-240.0001298
C20.0000108
D670.0003624
L20.0000108
N10.0000054
R80.0000433
S34680.0187571
V5270.0028503
X178420.0965006
A264-70.0000379
D79740.0431283
S380.0002055
T260.0001406
V200.0001082
X159340.0861810
Y10.0000054
K304N27920.0151009
Q3050.0016496
T20.0000108
X45850.0247985
T307-10.0000054
I13990.0075667
N20.0000108
S140.0000757
X47390.0256315
I332M20.0000108
T20.0000108
V80900.0437557
X48850.0264211
L335F2190.0011845
S9510.0051436
V10.0000054
X46620.0252150
G339D2910.0015739
H1780930.9632376
I10.0000054
L10.0000054
N50.0000270
P10.0000054
Q20.0000108
R1300.0007031
S30.0000162
X50480.0273027
Y480.0002596
A344D20.0000108
S1100.0005949
T9530.0051544
V190.0001028
X61140.0330683
R346-1020.0005517
A80.0000433
E10.0000054
I990.0005355
K70.0000379
N10.0000054
P40.0000216
S8000.0043269
T1684800.9112445
X65500.0354265
K356E80.0000433
L10.0000054
M20.0000108
N10.0000054
Q250.0001352
R30.0000162
T93560.0506031
X72370.0391422
L368I1637480.8856509
M50.0000270
T10.0000054
V190.0001028
X79100.0427822
S371F1764300.9542431
L130.0000703
X81070.0438477
S373A10.0000054
F20.0000108
P1763540.9538320
Q10.0000054
T20.0000108
X83430.0451241
Y140.0000757
S375-630.0003407
A470.0002542
F1754150.9487533
L10.0000054
X88750.0480015
T376-1480.0008005
A1755590.9495322
D10.0000054
G30.0000162
L140.0000757
P10.0000054
S10.0000054
V70.0000379
X87560.0473579
R403G10.0000054
K88610.0479258
S10.0000054
T30.0000162
X91700.0495971
D405-20.0000108
H10.0000054
N1788060.9670939
S130.0000703
X56870.0307588
Y20.0000108
R408G320.0001731
I50.0000270
N660.0003570
S1750810.9469468
T10.0000054
X72640.0392882
K417D10.0000054
H10.0000054
I60.0000325
N1727110.9341284
R10.0000054
S50.0000270
T80.0000433
X105790.0572178
N440-20.0000108
K1781230.9633999
R580.0003137
X63520.0343556
K444M90.0000487
N1070.0005787
R910.0004922
T37470.0202661
X59590.0322300
V445A1140.0006166
F10.0000054
H78750.0425929
I10.0000054
L400.0002163
P1647480.8910595
S660.0003570
T30.0000162
X70930.0383634
Y20.0000108
G446D760.0004111
I610.0003299
N170.0000919
S1772980.9589377
T120.0000649
X69140.0373952
N450D86640.0468603
I90.0000487
K140.0000757
X57660.0311861
Y60.0000325
L452K20.0000108
M3960.0021418
Q3400.0018389
R223190.1207150
V10.0000054
W78550.0424847
X59840.0323652
L455-90.0000487
F471180.2548434
S35950.0194440
W2560.0013846
X67080.0362810
F456-10.0000054
L1287980.6966196
S20.0000108
V70.0000379
X72990.0394775
N460-20.0000108
D10.0000054
E50.0000270
H2370.0012818
K1764480.9543404
R10.0000054
S10.0000054
T20.0000108
X64670.0349776
Y30.0000162
A475G20.0000108
S250.0001352
T10.0000054
V77960.0421656
X44500.0240684
S477D90.0000487
I10.0000054
K410.0002218
N1791900.9691709
R10.0000054
X48920.0264590
Y10.0000054
T478E510.0002758
G20.0000108
I6890.0037265
K1284080.6945102
N1870.0010114
Q730.0003948
R494190.2672887
X51950.0280978
N481D70.0000379
E10.0000054
G40.0000216
H40.0000216
I90.0000487
K88760.0480069
R130.0000703
S800.0004327
T60.0000325
X41870.0226459
Y460.0002488
V483-63650.0344259
A200.0001082
F470.0002542
G60.0000325
I380.0002055
K140.0000757
L50.0000270
T10.0000054
X53340.0288496
E484-150.0000811
A1713420.9267240
K78910.0426794
P30.0000162
R80.0000433
S150.0000811
T150.0000811
V420.0002272
X47800.0258532
F486-10.0000054
A310.0001677
H80.0000433
I20.0000108
L1540.0008329
P1756280.9499053
R10.0000054
S36110.0195305
T20.0000108
V1070.0005787
X46980.0254097
F490A90.0000487
P12010.0064958
S1665520.9008167
T20.0000108
V10.0000054
X37370.0202120
Y70.0000379
S494-10.0000054
A60.0000325
L30.0000162
P25490.0137866
T10.0000054
X31270.0169128
Q498F10.0000054
R1796540.9716805
X47110.0254800
N501F20.0000108
S10.0000054
T10.0000054
X44370.0239981
Y1800390.9737628
Y505H1795480.9711071
N20.0000108
Q20.0000108
X46500.0251501
V511A10.0000054
I14570.0078804
L10.0000054
X28890.0156255
P521L80.0000433
Q670.0003624
S131300.0710152
T44620.0241333
X54700.0295852
T547A30.0000162
I22810.0123371
K860.0004651
S10.0000054
X7060.0038185
E554A1190.0006436
D1260.0006815
G920.0004976
K125690.0679810
N40.0000216
Q2800.0015144
R10.0000054
V990.0005355
X6700.0036238
A570D10.0000054
G10.0000054
S80.0000433
T40.0000216
V83290.0450484
X4400.0023798
T572A20.0000108
I16080.0086971
N20.0000108
S50.0000270
X3390.0018335
T573A20.0000108
I43840.0237114
X3280.0017740
Q613-10.0000054
E130.0000703
H28600.0154687
L10.0000054
X8250.0044621
Y20.0000108
E619-20.0000108
A20.0000108
D160.0000865
G10.0000054
K1060.0005733
Q4510.0024393
V90.0000487
X8100.0043810
P621-30.0000162
A110.0000595
F30.0000162
H110.0000595
L150.0000811
R90.0000487
S85320.0461464
T80.0000433
X8760.0047380
E654-10.0000054
A60.0000325
D100.0000541
K4300.0023257
Q840.0004543
V1750.0009465
X29850.0161447
H655-10.0000054
F100.0000541
X31120.0168316
Y1816980.9827357
Q675-10.0000054
H2340.0012656
K3750.0020282
L130.0000703
P10.0000054
R450.0002434
X26850.0145221
Q677E10.0000054
H5220.0028233
K130.0000703
L20.0000108
R1170.0006328
X10200.0055168
N679-20.0000108
G20.0000108
K1826300.9877765
M80.0000433
Q10.0000054
R2450.0013251
T10.0000054
X17640.0095408
P681-470.0002542
H1736220.9390557
L40.0000216
Q10.0000054
R90610.0490075
S10.0000054
X19110.0103359
Y130.0000703
A688D10.0000054
G10.0000054
P10.0000054
S300.0001623
T1180.0006382
V9810.0053059
X33060.0178809
A701-10.0000054
L10.0000054
S80.0000433
T130.0000703
V120000.0649035
X32230.0174320
N703-10.0000054
D10.0000054
H10.0000054
I11110.0060090
K330.0001785
S310.0001677
T20.0000108
X31330.0169452
Y1380.0007464
S704-10.0000054
A30.0000162
D10.0000054
L115720.0625886
P30.0000162
T30.0000162
X31980.0172968
T732A120.0000649
I11080.0059928
S10.0000054
X31590.0170858
N764F20.0000108
K1815400.9818811
Q10.0000054
T10.0000054
X31890.0172481
D796C20.0000108
F10.0000054
H890.0004814
S10.0000054
X44040.0238196
Y1802730.9750284
P809-10.0000054
L280.0001514
Q70.0000379
S5370.0029044
T200.0001082
X48650.0263129
L858-10.0000054
I31120.0168316
P10.0000054
V10.0000054
X34660.0187463
S939F84050.0454595
L90.0000487
X38490.0208178
Y60.0000325
Q954H1811430.9797339
L30.0000162
N10.0000054
R30.0000162
X35480.0191898
Y430.0002326
N969K1813840.9810374
R210.0001136
T10.0000054
X33880.0183244
P1143A20.0000108
F30.0000162
H50.0000270
L82780.0447726
S320.0001731
X6900.0037319
D1153A60.0000325
G250.0001352
H1560.0008437
N230.0001244
V220.0001190
X7060.0038185
Y4230.0022878
P1162A60.0000325
L2780.0015036
Q50.0000270
R300.0001623
S6480.0035048
T20.0000108
X7790.0042133
V1264A40.0000216
F10.0000054
L6870.0037157
M240.0001298
X24540.0132728


Table 1B. Details regarding common mutations listed in A and their geographic locations.


oriposmutcovariationslocation# of occurrences#seqs from local#seqs from state/province#seqs from country#seqs from continent
L5FL5F,T19I,L24-,P25-,P26-,A27S,Q52H,A67X,H69X,V70X,G75X,V83X,T95X,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,F456L,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,T732X,N764X,D796X,Q954H,N969K,D614GGermany_Baden-Wurttemberg_Freiburg1862152872Europe 70924
L5FL5F,T19I,L24X,P25X,P26-,A27-,Q52H,V83A,T95I,G142D,Y144X,H146K,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,F456L,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GSpain_Castilla-y-Leon18456544Europe 70924
L5FL5F,T19X,R21X,L24X,P25X,P26X,A27X,S50L,H69X,V70X,V127F,G142D,Y144X,F157S,R158G,N211-,L212I,V213G,L216F,H245N,A264D,I332V,G339H,K356T,S371F,S373P,T376A,R403X,D405N,R408S,K417N,N440K,V445H,G446S,N450D,L452W,N460K,S477N,T478K,N481K,V483X,E484K,F486P,Q498R,N501Y,Y505H,E554K,A570V,P621S,H655Y,N679K,P681R,N764K,D796Y,S939F,Q954H,N969K,P1143L,D614GUnited-Kingdom_England11081514652Europe 70924
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L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,F456L,N460K,A475V,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GBrazil_Sao-Paulo_Santana-de-Parnaiba1123851931South-America 3499
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L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,N185I,F186-,V213E,D253G,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478R,E484A,F486P,F490S,Q498R,N501Y,Y505H,P521S,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Georgia126247127North-America 76628
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146K,Q183E,N185I,F186-,V213E,D253G,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478R,E484A,F486P,F490S,Q498R,N501Y,Y505H,P521S,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GSingapore13289Asia 25533
L5FL5F,T19I,L24-,P25-,P26-,A27S,Q52H,V83A,G142D,Y144-,H146Q,F157L,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,L452R,F456L,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GSpain_Catalunya_Mataro1367116544Europe 70924
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,D253G,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478R,E484A,F486P,F490S,Q498R,N501Y,Y505H,P521S,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Georgia126247127North-America 76628
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,F456L,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,T573I,H655Y,N679K,P681H,S704L,N764K,D796Y,Q954H,N969K,D614GUSA_Georgia126247127North-America 76628
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y145X,H146X,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,F456L,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,V511I,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GNorway_Nordland14379Europe 70924
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y145X,H146X,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,F456L,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,T573I,H655Y,N679K,P681H,S704L,N764K,D796Y,Q954H,N969K,D614GNorway_Nordland14379Europe 70924
L5FL5F,T19I,L24-,P25-,P26-,A27S,Q52H,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,F456L,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GCanada_British-Columbia6523128764North-America 76628
L5FL5F,T19I,L24-,P25-,P26-,A27S,Q52H,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,F456L,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,T732I,N764K,D796Y,Q954H,N969K,D614GCanada_British-Columbia2523128764North-America 76628
L5FL5F,T19I,L24-,P25-,P26-,A27S,Q52H,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,K356T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,F456L,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GCanada_British-Columbia1523128764North-America 76628
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,E180V,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478R,E484A,F486P,F490S,Q498R,N501Y,Y505H,P521T,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_California31039647127North-America 76628
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,F456L,N460K,A475V,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_New-York1829647127North-America 76628
L5FL5F,T19I,L24-,P25-,P26-,A27S,Q52H,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,F456L,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Illinois1114647127North-America 76628
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144X,Y145X,H146Q,E180V,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478R,E484A,F486P,F490S,Q498R,N501Y,Y505H,P521T,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GSlovenia2906Europe 70924
L5FL5F,T19I,L24-,P25-,P26-,A27S,Q52H,V83X,T95X,G142D,Y144-,H146Q,F157L,Q183E,V213E,G252V,G339H,A344X,R346X,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,F456L,N460K,S477N,T478K,E484A,F486P,F490S,Q498X,N501X,Y505X,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GItaly_Friuli-Venezia-Giulia_Trieste1972174077Europe 70924
L5FL5F,T19I,L24-,P25-,P26-,A27S,Q52H,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,F456L,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,S704L,N764K,D796Y,Q954H,N969K,D614GUSA_Tennessee28047127North-America 76628
L5FL5F,T19I,L24-,P25-,P26-,A27S,Q52H,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,F456L,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Ohio195447127North-America 76628
L5FL5F,T19I,L24-,P25-,P26-,A27S,Q52H,V83A,G142D,Y144-,H146Q,K182Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,F456L,N460K,S477N,T478R,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GFrance_Occitanie_Haute-Garonne1477139412896Europe 70924
L5FL5F,T19I,L24-,P25-,P26-,A27S,Q52H,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,F456L,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GPeru_Lima1461711South-America 3499
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,N185I,F186-,V213E,D253G,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417X,N440K,V445P,G446S,N460K,S477N,T478R,E484A,F486P,F490S,Q498R,N501Y,Y505H,P521S,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GSweden_Stockholm112655269Europe 70924
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417X,N440K,V445P,G446S,F456L,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,T573I,H655Y,N679K,P681H,S704L,N764K,D796Y,Q954H,N969K,D614GSweden_Stockholm112655269Europe 70924
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,E180V,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478R,E484A,F486P,F490S,Q498R,N501Y,Y505H,P521T,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Virginia2122147127North-America 76628
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,K182N,Q183E,V213E,D253G,T307I,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,P521S,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Texas1341647127North-America 76628
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