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Tables of mutating sites in Spike, updated daily

Last update: Feb 3, 2023

Dates of current data


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Collection dates: 2022-11-05 - 2023-02-02

Table 1A. Table of sites with common mutations, found with a frequency of >0.003. (Within the ACE2 contact region, the frequency threshold for inclusion is lower, >0.001.)

Note: The mutation D614G is not included in this summary; it is now the globally dominant form and can be readily tracked using many other tools at this site.

# of seqs: 644,006

oriposmutcountfrequency
L5-340.0000528
F77740.0120713
I60.0000093
S10.0000016
X90730.0140884
T19-400.0000621
I6219660.9657767
K40.0000062
L9050.0014053
R6530.0010140
V1010.0001568
X166170.0258026
L24-6199400.9626308
G10.0000016
I10.0000016
Q10.0000016
R10.0000016
S8260.0012826
W30.0000047
X196050.0304423
P25-6203000.9631898
A10.0000016
F50.0000078
H4290.0006661
I1690.0002624
L20.0000031
N90.0000140
R10.0000016
S8740.0013571
T540.0000839
V10.0000016
X196250.0304733
Y410.0000637
P26-6229040.9672332
H370.0000575
I10.0000016
L10.0000016
N20.0000031
Q730.0001134
S40.0000062
T1380.0002143
X175160.0271985
A27-30300.0047049
Q1390.0002158
S6201880.9630159
X172380.0267668
H69-4932120.7658500
A540.0000839
C10.0000016
E10.0000016
F7450.0011568
I10.0000016
L400.0000621
P50.0000078
Q20.0000031
S2080.0003230
T150.0000233
X288450.0447900
Y940.0001460
V70-4974670.7724571
A50.0000078
D10.0000016
F200.0000311
G40.0000062
I4390.0006817
L220.0000342
R10.0000016
T10.0000016
X253850.0394173
Y10.0000016
T76-290.0000450
A320.0000497
I20470.0031785
N130.0000202
S180.0000280
X168080.0260991
V83-420.0000652
A484870.0752897
D10.0000016
F2960.0004596
I140.0000217
L420.0000652
P40.0000062
S10.0000016
T100.0000155
X181920.0282482
G142-2960.0004596
A30.0000047
D6168590.9578467
E20.0000031
I10.0000016
K10.0000016
N20.0000031
X218560.0339376
Y40.0000062
Y144-901350.1399599
C100.0000155
D10.0000016
F150.0000233
H130.0000202
K70.0000109
Q280.0000435
S10.0000016
V10.0000016
X164350.0255199
Y145-4550.0007065
C30.0000047
D30.0000047
E10.0000016
G20.0000031
H21610.0033556
K13690.0021258
L2300.0003571
N450.0000699
P170.0000264
Q432010.0670817
R10.0000016
S20.0000031
X118200.0183539
H146-493670.0766561
D120.0000186
E20.0000031
I450.0000699
K1810.0002811
L14840.0023043
N940.0001460
P120.0000186
Q32160.0049937
R110.0000171
X105740.0164191
Y4680.0007267
K147-12560.0019503
D70.0000109
E705970.1096216
G20.0000031
I16350.0025388
L10.0000016
N33680.0052298
Q9390.0014581
R760.0001180
T2320.0003602
X105550.0163896
K150-480.0000745
E27200.0042236
I400.0000621
N3780.0005870
Q30.0000047
R610.0000947
T40.0000062
X96850.0150387
W152-770.0001196
C20.0000031
F10.0000016
G90.0000140
L16390.0025450
P10.0000016
Q1130.0001755
R689980.1071388
S80.0000124
X109160.0169502
M153-490.0000761
I29770.0046226
K20.0000031
L60.0000093
R10.0000016
T47340.0073509
V1200.0001863
X104540.0162328
F157-15940.0024751
C10.0000016
L716610.1112738
S1170.0001817
V20.0000031
X121300.0188352
N164-380.0000590
D50.0000078
H150.0000233
I350.0000543
K45020.0069906
S250.0000388
T700.0001087
X113490.0176225
Y10.0000016
L176-350.0000543
C20.0000031
F20100.0031211
H60.0000093
I90.0000140
P20.0000031
R20.0000031
V20.0000031
X132580.0205868
G181-420.0000652
A3190.0004953
E2800.0004348
L20.0000031
R6640.0010310
T10.0000016
V21720.0033726
X130420.0202514
K182-460.0000714
E8110.0012593
I12950.0020109
M20.0000031
N5030.0007810
Q300.0000466
R1420.0002205
T750.0001165
X131090.0203554
Q183-420.0000652
D50.0000078
E483390.0750599
G50.0000078
H2570.0003991
K1240.0001925
L620.0000963
P1050.0001630
R2400.0003727
X140420.0218041
N185-470.0000730
D44940.0069782
G10.0000016
H20.0000031
I900.0001398
K1070.0001661
P10.0000016
S2170.0003370
T2480.0003851
X127790.0198430
Y3870.0006009
P209-680.0001056
H330.0000512
L29500.0045807
S640.0000994
T40.0000062
X107790.0167374
I210-1670.0002593
A330.0000512
F320.0000497
K10.0000016
L60.0000093
S40.0000062
T790.0001227
V665480.1033344
X111050.0172436
L212-8160.0012671
E90.0000140
F560.0000870
G2140.0003323
I1030.0001599
R10.0000016
S12050.0018711
X106400.0165216
V213-10360.0016087
A30.0000047
D50.0000078
E494990.0768611
G5778870.8973317
I10.0000016
K20.0000031
L10.0000016
M10.0000016
N1500.0002329
Q10.0000016
R1640.0002547
T30.0000047
W490.0000761
X129900.0201706
D215-760.0001180
A80.0000124
E1350.0002096
G4760.0007391
H11080.0017205
N470.0000730
V1060.0001646
X101800.0158073
Y2740.0004255
H245-1140.0001770
F20.0000031
L10.0000016
N49010.0076102
P10.0000016
R550.0000854
X215640.0334842
Y11620.0018043
Y248-4930.0007655
C10.0000016
D4440.0006894
F40.0000062
H8370.0012997
N4980.0007733
S9380.0014565
W20.0000031
X216080.0335525
P251-300.0000466
A10.0000016
H7590.0011786
L18690.0029021
R10.0000016
S2530.0003929
T710.0001102
X219740.0341208
Y20.0000031
G252-230.0000357
A30.0000047
D3130.0004860
I10.0000016
S2860.0004441
V327550.0508613
X233750.0362962
D253-360.0000559
A90.0000140
E10.0000016
F10.0000016
G84350.0130977
H20.0000031
I10.0000016
N340.0000528
S20.0000031
V150.0000233
X231050.0358770
Y3400.0005279
S255-310.0000481
A10.0000016
C10.0000016
F40370.0062686
I10.0000016
P330.0000512
T10.0000016
X256950.0398987
Y90.0000140
S256-350.0000543
A3350.0005202
D10.0000016
L22410.0034798
P1680.0002609
T120.0000186
V10.0000016
X259080.0402294
G257-5720.0008882
C50.0000078
D61160.0094968
H20.0000031
N70.0000109
R180.0000280
S662970.1029447
V2410.0003742
X271520.0421611
G339-260.0000404
A120.0000186
D5067440.7868622
E40.0000062
H1172240.1820231
L10.0000016
N1310.0002034
P10.0000016
Q30.0000047
R530.0000823
V130.0000202
X174120.0270370
Y1310.0002034
R346-5860.0009099
A90.0000140
E600.0000932
G130.0000202
I26270.0040792
K2190.0003401
S37410.0058090
T3925990.6096201
V20.0000031
X212270.0329609
K356-120.0000186
E60.0000093
I20.0000031
M40.0000062
N80.0000124
Q30.0000047
R480.0000745
T356900.0554187
X230300.0357605
L368-140.0000217
G10.0000016
I467110.0725319
T10.0000016
V20.0000031
X231500.0359469
S371-160.0000248
C10.0000016
D20.0000031
F6150400.9550222
G10.0000016
I20.0000031
L1150.0001786
T10.0000016
X266430.0413707
Y10.0000016
S373-150.0000233
D20.0000031
P6186610.9606448
Q20.0000031
T10.0000016
X241540.0375059
S375-320.0000497
A1060.0001646
F6163950.9571262
I20.0000031
X257530.0399888
Y10.0000016
T376-1380.0002143
A6133960.9524694
G10.0000016
V100.0000155
X287890.0447030
D405-330.0000512
H20.0000031
K10.0000016
N6196020.9621059
S40.0000062
T10.0000016
X218050.0338584
Y10.0000016
R408-320.0000497
G260.0000404
I60.0000093
N290.0000450
S6001450.9318935
T10.0000016
W10.0000016
X309710.0480912
K417-270.0000419
D10.0000016
H20.0000031
I70.0000109
N5938550.9221265
S170.0000264
T610.0000947
X407810.0633239
Y30.0000047
N440-170.0000264
E40.0000062
K6050590.9395239
R430.0000668
X281150.0436564
K444-160.0000248
A130.0000202
E40.0000062
G20.0000031
M33110.0051413
N99220.0154067
P10.0000016
Q1170.0001817
R88590.0137561
S170.0000264
T2925710.4542986
X261460.0405990
V445-180.0000280
A81110.0125946
D10.0000016
F2560.0003975
G300.0000466
H50.0000078
I510.0000792
L370.0000575
P468020.0726732
Q10.0000016
S90.0000140
T20.0000031
X256750.0398676
G446-150.0000233
A30.0000047
C10.0000016
D19520.0030310
I90.0000140
N120.0000186
R380.0000590
S1176310.1826551
T260.0000404
V1050.0001630
X263110.0408552
N450-320.0000497
D126840.0196955
I20.0000031
K20.0000031
M20.0000031
Q10.0000016
R20.0000031
S10.0000016
V10.0000016
X249920.0388071
Y20.0000031
L452-390.0000606
K60.0000093
M52280.0081179
Q1370.0002127
R5149360.7995826
V40.0000062
W30.0000047
X270410.0419887
N460-370.0000575
D10.0000016
H1540.0002391
I400.0000621
K4040780.6274445
Q10.0000016
R10.0000016
S3020.0004689
T150.0000233
X288240.0447573
Y1930.0002997
S477-640.0000994
A10.0000016
D190.0000295
G10.0000016
H10.0000016
I20.0000031
K510.0000792
N6229930.9673714
X179660.0278973
Y10.0000016
T478-640.0000994
D10.0000016
E1680.0002609
I1680.0002609
K6220220.9658637
N3940.0006118
Q240.0000373
R10470.0016258
X181510.0281845
E484-780.0001211
A6193610.9617317
D20.0000031
G60.0000093
K130.0000202
P160.0000248
R44260.0068726
S1070.0001661
T730.0001134
V5290.0008214
X172560.0267948
F486-810.0001258
A16100.0025000
D10.0000016
E20.0000031
G30.0000047
H20.0000031
I47380.0073571
L450.0000699
P275050.0427092
S507320.0787757
V4977520.7728996
X177700.0275929
Y10.0000016
F490-880.0001366
A200.0000311
I90.0000140
L640.0000994
N10.0000016
P1730.0002686
S888170.1379133
V980.0001522
X185140.0287482
Y120.0000186
S494-970.0001506
A20.0000031
L90.0000140
P23230.0036071
X173480.0269376
Q498-1010.0001568
H30.0000047
L30.0000047
P10.0000016
R6205790.9636230
X213600.0331674
N501-1260.0001957
A10.0000016
F20.0000031
H10.0000016
I10.0000016
S10.0000016
X201560.0312978
Y6225840.9667363
Y505-960.0001491
H6228220.9671059
K10.0000016
N10.0000016
Q20.0000031
R10.0000016
X189030.0293522
T547-20.0000031
A110.0000171
I13110.0020357
K14330.0022251
R400.0000621
S40.0000062
X39990.0062096
Q613E590.0000916
H23900.0037111
K10.0000016
L30.0000047
R40.0000062
X10350.0016071
E619A260.0000404
D320.0000497
G40.0000062
H10.0000016
K2230.0003463
Q55930.0086847
V80.0000124
X11010.0017096
H655-20.0000031
F220.0000342
N10.0000016
X16190.0025140
Y6420030.9968898
N658-10.0000016
D60.0000093
I50.0000078
K190.0000295
S69300.0107608
T10.0000016
X12650.0019643
Y30.0000047
I666-10.0000016
V89300.0138663
X11600.0018012
Q677-10.0000016
E40.0000062
H21130.0032810
K90.0000140
L160.0000248
P20.0000031
R600.0000932
X9680.0015031
N679-40.0000062
K6414560.9960404
M20.0000031
Q20.0000031
R380.0000590
T10.0000016
X15570.0024177
P681-10.0000016
H6401080.9939473
L50.0000078
N140.0000217
Q60.0000093
R920.0001429
X21340.0033136
Y970.0001506
A688-40.0000062
D230.0000357
E10.0000016
G180.0000280
S970.0001506
T1870.0002904
V24410.0037903
X90970.0141256
N764-40.0000062
E10.0000016
I30.0000047
K6273910.9742006
P10.0000016
R1680.0002609
T10.0000016
X142000.0220495
D796-80.0000124
C120.0000186
F20.0000031
H1020.0001584
I10.0000016
V10.0000016
X54870.0085201
Y6370580.9892113
T883-20.0000031
A20.0000031
I46170.0071692
M60.0000093
S60.0000093
V10.0000016
X35680.0055403
Q954-40.0000062
H6400370.9938370
L140.0000217
N30.0000047
R60.0000093
X36350.0056444
Y1190.0001848
N969-20.0000031
E20.0000031
K6411460.9955590
R150.0000233
T10.0000016
X26450.0041071
A1020-50.0000078
F90.0000140
G70.0000109
S210120.0326270
T1090.0001693
V4090.0006351
X30030.0046630
Y10.0000016
P1162A40.0000062
L14120.0021925
Q120.0000186
R280.0000435
S22570.0035046
T210.0000326
X21420.0033261
D1199-150.0000233
A30.0000047
E50.0000078
G180.0000280
H1160.0001801
N21290.0033059
V30.0000047
X27220.0042267
Y200.0000311
C1243-460.0000714
F35990.0055885
G20.0000031
R50.0000078
S40.0000062
X23640.0036708
Y30.0000047
P1263-10.0000016
L9150.0014208
Q21920.0034037
R860.0001335
S1360.0002112
T250.0000388
X16560.0025714
V1264-10.0000016
A200.0000311
E30.0000047
L24480.0038012
M580.0000901
X16220.0025186


Table 1B. Details regarding common mutations listed in A and their geographic locations.


oriposmutcovariationslocation# of occurrences#seqs from local#seqs from state/province#seqs from country#seqs from continent
L5-L5-,T19I,L24-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,L452R,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GNetherlands_Friesland37768172Europe 239246
L5-L5-,T19I,L24-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,R346T,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,L452R,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GNetherlands_Noord-Holland116848172Europe 239246
L5-L5-,T19I,L24-,P26-,A27S,H69-,V70-,G142D,Y144-,V213G,G339D,R346T,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GNetherlands_Gelderland111058172Europe 239246
L5-L5-,T19I,L24-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,R346T,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GNetherlands_Noord-Holland416848172Europe 239246
L5-L5-,T19I,L24-,P26-,A27S,G142D,K147E,W152R,F157L,I210V,V213G,G257S,G339H,R346T,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,K444T,G446S,L452R,N460K,S477N,T478K,E484A,F486S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GNetherlands_Gelderland111058172Europe 239246
L5-L5-,T19I,L24-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GNetherlands_Gelderland111058172Europe 239246
L5-L5-,T19I,L24-,P26-,A27S,V83A,G142D,Y145Q,H146-,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486S,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GNetherlands_Noord-Holland116848172Europe 239246
L5-L5-,T19I,L24-,P26-,A27S,H69-,V70-,G142D,Y144-,V213G,G339D,R346T,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,L452R,S477N,T478K,E484V,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GNetherlands_Noord-Holland216848172Europe 239246
L5-L5-,T19I,L24-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,R346T,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,L452R,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N658S,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GNetherlands_Utrecht16508172Europe 239246
L5-L5-,T19I,L24-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GNetherlands_Noord-Holland216848172Europe 239246
L5-L5-,T19I,L24-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,L452R,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GNetherlands_Gelderland311058172Europe 239246
L5-L5-,T19I,L24-,P26-,A27S,H69-,V70-,G142D,Y144-,V213G,G339D,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GNetherlands_Limburg15558172Europe 239246
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L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,Y144-,V213G,G339D,R346T,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_California1647421196395North-America 238265
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L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,S371F,S373P,T376A,D405N,K417X,N440X,K444X,V445X,G446X,N450X,L452X,N460X,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764X,D796Y,Q954H,N969K,D614GBrazil_Pernambuco_Recife138168310414South-America 22489
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L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,Y144-,V213G,D253G,G339D,R346T,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Texas114291196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y145Q,H146-,Q183E,V213E,H245X,Y248X,P251X,G252X,D253X,S255X,S256X,G257X,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486S,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GCanada_Ontario81814634495North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Texas1414291196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Michigan134906196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,R346T,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_South-Carolina51466196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,D253G,G339D,R346T,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUnited-Kingdom_England_QEUH278604110149720Europe 239246
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Georgia33101196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,Y144-,V213G,G339D,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_South-Carolina31466196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_New-York918059196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y145Q,H146-,Q183E,V213E,H245X,Y248X,P251X,G252X,D253X,S255X,S256X,G257X,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440X,V445P,G446S,N460K,S477N,T478K,E484A,F486S,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,A688X,N764K,D796Y,Q954H,N969K,D614GIndonesia_Jakarta_Jakarta-Timur122518764420Asia 117898
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,Y144-,V213G,Y248S,G339D,R346T,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444N,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N658S,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GIndonesia_Jakarta_Jakarta-Utara130218764420Asia 117898
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,R346T,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Florida95105196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,K147N,V213G,G339D,S371F,S373P,T376A,D405N,R408S,K417N,N440K,L452R,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Virginia75231196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y145Q,H146-,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_South-Carolina31466196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y145Q,H146-,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478R,E484A,F486S,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Tennessee1944196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y145Q,H146-,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Maryland64795196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,I666V,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_District-of-Columbia11081196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,N164X,L176X,N185X,P209X,I210X,L212X,V213X,D215X,G339D,R346T,S371F,S373P,T376A,D405N,R408S,K417N,N440X,K444X,V445X,G446X,N450X,L452X,N460X,S477X,T478X,E484X,F486X,F490X,S494X,Q498X,N501X,Y505X,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GFrance_Bretagne1157828217Europe 239246
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,Y144-,V213G,G257-,G339D,R346T,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Louisiana11371196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,Y144-,K182I,V213G,G339D,R346T,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Louisiana11371196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Minnesota12576196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,R346T,S371F,S373P,T376A,D405N,R408S,K417N,N440K,L452R,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_North-Carolina168396196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y145Q,H146-,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486S,F490P,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Georgia103101196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y145Q,H146-,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Virginia95231196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,Y144-,N185D,V213G,G339D,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_New-Jersey16334196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,S371F,S373P,T376A,D405N,R408S,K417N,N440K,L452R,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Colorado67016196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,G142D,K147E,W152R,F157L,I210V,V213G,G257S,G339H,R346T,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,G446S,L452R,N460K,S477N,T478K,E484A,F486S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Virginia15231196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,G142D,K147E,W152R,F157L,I210V,V213G,G257S,G339H,R346T,K356T,S371F,S373P,T376A,D405N,R408S,K417N,N440K,G446S,N460K,S477N,T478K,E484A,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GSouth-Korea2315181Asia 117898
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,S371F,S373P,T376A,D405N,R408S,K417N,N440K,L452R,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Kansas4937196395North-America 238265
L5FT19I,L24-,P25-,P26-,A27S,V83A,G142D,Y145Q,H146-,Q183E,V213E,G252V,G339H,R346T,K356X,L368X,S371X,S373X,S375X,T376X,D405N,R408S,K417N,N440X,K444X,V445X,G446X,N460K,S477N,T478K,E484A,F486S,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GGuatemala_Zacapa_Zacapa145631297North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_California6047421196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,Y144-,V213G,G339D,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_California1247421196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,Y144-,V213G,G339D,S371F,S373P,T376A,D405N,R408S,K417N,N440K,L452R,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Washington25836196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,R346T,S371F,S373P,T376A,D405N,R408S,K417N,N440K,L452R,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_North-Dakota12407196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,R346T,S371F,S373P,T376A,D405N,R408X,K417X,N440X,K444X,V445X,G446X,N450X,L452X,N460X,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764X,D796Y,Q954H,N969K,D614GSouth-Africa_Gauteng13031207Africa 3332
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445A,L452R,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Indiana11871196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,R346T,S371F,S373P,T376A,D405N,R408S,K417N,N440K,L452R,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Arizona124646196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,K182I,V213G,G339D,R346T,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_California647421196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,R346T,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_California5347421196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y145Q,H146-,Q183E,V213E,H245X,Y248X,P251X,G252X,D253X,S255X,S256X,G257X,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_New-York_Monroe195118059196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,Y144-,V213G,G339D,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_Virginia55231196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,H69-,V70-,G142D,V213G,G339D,R346T,S371F,S373P,T376A,D405N,R408S,K417N,N440K,K444T,L452R,N460K,S477N,T478K,E484A,F486V,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_North-Carolina268396196395North-America 238265
L5FL5F,T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y145Q,H146-,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K,D614GUSA_District-of-Columbia11081196395North-America 238265
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