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COVID-19 Viral Genome Analysis Pipeline
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Variants
Curated Variants WHO VOI/VOC reference strains
Resources
COV CATNAP COV Spike Feature Embers Frequency Changes in Common Forms hCov-19 variants Distribution Map Most common forms
based on Pango lineage designations SHIVER Tables of Mutating Sites:
Amino acid Frequencies and Entropy XSpike Variant Color Keys Symbols in Sequences
Tools
AnalyzeAlign Geographically Restricted Embers Geographically Restricted Frequency
Changes in Common forms Geographically Restricted Pango
Common Forms Geographically Restricted SHIVER Geographically Restricted XSpike Isotonic Regression Relative Frequency Change
By Geographical Region Sequence Locator Tables of Mutating Sites:
Amino acid Frequencies and Entropy Tracking Mutations Variant Visualizer External tools


Geographically Restricted XSpike

eXplore the Spike protein sequence in the SARS CoV-2 virus

See analysis on global sequences
See explanation
Early 2021 Variants color key
Delta Variants color key
Delta and Omicron Variants color key

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Sequence filter
Geographic region only use from