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COVID-19 Viral Genome Analysis Pipeline
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Curated Variants WHO VOI/VOC reference strains
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COV CATNAP COV Spike Feature Embers Frequency Changes in Common Forms hCov-19 variants Distribution Map Most common forms
based on Pango lineage designations SHIVER Tables of Mutating Sites:
Amino acid Frequencies and Entropy XSpike Variant Color Keys Symbols in Sequences
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AnalyzeAlign Geographically Restricted Embers Geographically Restricted Frequency
Changes in Common forms Geographically Restricted Pango
Common Forms Geographically Restricted SHIVER Geographically Restricted XSpike Isotonic Regression Relative Frequency Change
By Geographical Region Sequence Locator Tables of Mutating Sites:
Amino acid Frequencies and Entropy Tracking Mutations Variant Visualizer External tools


COV Variant Visualizer


Last data update: Sep 27, 2025

Have your own alignments? use Variant Visualizer at HIV databases
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Pango Lineage Designation in GISAID
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last modified: Thu Jul 18 11:03 2024

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