COVID-19 Viral Genome Analysis Pipeline COVID-19 Viral Genome Analysis Pipeline home COVID-19 Viral Genome Analysis Pipeline home
COVID-19 Viral Genome Analysis Pipeline
Enabled by data from   gisaid-logo
Home
Site Map
Variants
Curated Variants WHO VOI/VOC reference strains
Resources
COV CATNAP COV Spike Feature Embers Frequency Changes in Common Forms hCov-19 variants Distribution Map Most common forms
based on Pango lineage designations SHIVER Tables of Mutating Sites:
Amino acid Frequencies and Entropy XSpike Variant Color Keys Symbols in Sequences
Tools
AnalyzeAlign Geographically Restricted Embers Geographically Restricted Frequency
Changes in Common forms Geographically Restricted Pango
Common Forms Geographically Restricted SHIVER Geographically Restricted XSpike Isotonic Regression Relative Frequency Change
By Geographical Region Sequence Locator Tables of Mutating Sites:
Amino acid Frequencies and Entropy Tracking Mutations Variant Visualizer External tools


COV Variant Visualizer


Last data update: Sep 1, 2024

Have your own alignments? use Variant Visualizer at HIV databases
Input
Show
Genomic region
Mutation
 
Sequence filter
Mutational position(s)
  pos#   in   variant [+]
Combine mutiple positions on and or   condition
Geographic region