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Most common forms based on Pango lineage designations


Last update: Dec 6, 2023

Dates of current data

PANGO Lineages

Geographically local data, different time windows, and different proteins can be evaluated here


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SPIKE sequences: Short list of All days
Compute mutations relative to XBB.1.5 baseline sequence

As new lineages emerge, there are often many sequences with many ambiguous base calls. Our pipeline filters out such sequences, and as a consequence we undercount the number of sequences in GISAID that have been specified as members of related Pango lineages. Our strategy, however, enables us to use strictly high quality sequences to identify and track the common forms in emerging lineages.

COMMON FORMS OF SPIKE WITH A GIVEN PANGO LINEAGE DESIGNATION

For each lineage, we show the most common forms of SPIKE, as well as their counts within (and percentages of) the lineage. [Note that if a lineage contains several divergent forms, the consensus form might not be found among these common forms.] Also shown is the Hamming distance (HD) between each form and the most common form in that lineage. Deletions relative to the baseline reference strain are indicated with a dash (e.g. the two amino acid deletion at positions 156-157 is indicated with 'E156-,F157-'), and insertions are denoted by a plus sign (e.g. an extra T at position 143 is written '+143T'). [Note: Mutation strings are relative to baseline XBB.1.5].

We show the 5 most common forms. This output is based on sequences sampled from 2013-07-24 to 2023-11-28.

Baseline XBB.1.5: [T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K]

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Mutation(s) or Lineages(s)
Retrieve line if all terms found at least one term found
Pango       Lineage   Form   Form
Lineage       Count  Count    Pct  HD [Form as mutation string]

B.1.1.7      929775 591016  63.6%   0 +[H69-,V70-,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.7      929775  23614   2.5%   1 +[H69-,V70-,A570D,T716I,S982A,D1118H,K1191N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.1.7      929775  20030   2.2%   1 +[L5F,H69-,V70-,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.1.7      929775  10404   1.1%   1 +[H69-,V70-,W152R,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.1.7      929775   7721   0.8%   1 +[H69-,V70-,S98F,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

BA.2         825359 628627  76.2%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2         825359  18681   2.3%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2         825359  17021   2.1%   4 +[V213G,G339D,Q493R]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2         825359   7505   0.9%   1 +[L5F,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2         825359   5270   0.6%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

AY.4         583628 350273  60.0%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4         583628  12534   2.1%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4         583628  10547   1.8%   1 +[T19R,T95I,D138H,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4         583628   8483   1.5%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,L1141F]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4         583628   5361   0.9%   1 +[L5F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.1.1       464613 355871  76.6%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.1       464613  14885   3.2%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1       464613   6271   1.3%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 
BA.1.1       464613   3899   0.8%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1       464613   3500   0.8%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,F486P,F490S] 

BA.5.2.1     226818 166086  73.2%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.1     226818   3533   1.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.1     226818   3080   1.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.1     226818   2511   1.1%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.1     226818   1452   0.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

BA.2.12.1    215043 166364  77.4%   0 +[V213G,G339D,L452Q,Q493R,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.12.1    215043  11833   5.5%   1 +[N164K,V213G,G339D,L452Q,Q493R,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.12.1    215043   2618   1.2%   1 +[V213G,G339D,L452Q,Q493R,S704L,A879V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.12.1    215043   2406   1.1%   1 +[V213G,G339D,L452Q,Q493R,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.12.1    215043   1963   0.9%   1 +[V213G,G339D,L452Q,Q493R,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

BA.5.2       210092 146188  69.6%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2       210092   3178   1.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2       210092   2999   1.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.2       210092   1926   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.5.2       210092   1902   0.9%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.103       200745 108803  54.2%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.103       200745  24601  12.3%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.103       200745   3112   1.6%   1 +[T19R,D80Y,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.103       200745   1671   0.8%   1 +[T19R,E156G,F157-,R158-,L452R,Q613H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.103       200745   1199   0.6%   2 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.43        188535  92975  49.3%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.43        188535  27532  14.6%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43        188535   1976   1.0%   2 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43        188535   1829   1.0%   1 +[V6F,T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43        188535   1525   0.8%   1 +[T19R,A67S,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.1         174213 131552  75.5%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1         174213   7284   4.2%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1         174213   1668   1.0%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 
BA.1         174213   1462   0.8%   5 +[A67V,H69-,V70-,T95I,V143-,Y145-,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1         174213   1253   0.7%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,N440K,V445P,N460K,F486P,F490S] 

BA.5.1       162414 116697  71.9%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1       162414   4488   2.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1       162414   2585   1.6%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1       162414   1752   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.5.1       162414   1744   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.617.2    158824  37576  23.7%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.617.2    158824  29569  18.6%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.617.2    158824   8113   5.1%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.617.2    158824   6670   4.2%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.617.2    158824   4505   2.8%   1 +[T19R,K77T,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.44        158793  87881  55.3%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.44        158793  20305  12.8%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.44        158793   1210   0.8%   1 +[T19R,E156G,F157-,R158-,R214H,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.44        158793   1026   0.6%   1 +[L5F,T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.44        158793    934   0.6%   2 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.122       129180  47816  37.0%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.122       129180  14138  10.9%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122       129180   3566   2.8%   1 +[T19R,E156G,F157-,R158-,T240I,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122       129180   2577   2.0%   1 +[T19R,E156G,F157-,R158-,G181V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122       129180   2520   2.0%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,A879S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.9       128046  95747  74.8%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.9       128046   6507   5.1%   4 +[V213G,G339D,Q493R]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.9       128046   3455   2.7%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.9       128046   1108   0.9%   1 +[L5F,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.9       128046    554   0.4%   1 +[L179P,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BQ.1.1       113847  67891  59.6%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1       113847  12867  11.3%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1       113847    838   0.7%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,K417N,V445P,G446S,F486P,F490S] 
BQ.1.1       113847    741   0.7%   1 +[L5F,H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1       113847    626   0.5%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,R408S,V445P,G446S,F486P,F490S] 

AY.3         111538  51525  46.2%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.3         111538  13741  12.3%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.3         111538   4834   4.3%   1 +[T19R,V70I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.3         111538   1872   1.7%   2 +[T19R,V70I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.3         111538   1647   1.5%   2 +[T19R,V70I,E156G,F157-,R158-,M177I,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.2        106940  54334  50.8%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.2        106940   6077   5.7%   1 +[Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.2        106940   2892   2.7%   2 +[L18F,E780Q]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.2        106940   2806   2.6%   1 +[Q677P]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.2        106940   2508   2.3%   1 +[Q173K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5      100243  65262  65.1%   0  (consensus)
XBB.1.5      100243   2674   2.7%   1 +[H146K]-[H146Q] 
XBB.1.5      100243   1507   1.5%   1 -[K417N] 
XBB.1.5      100243    914   0.9%   1 +[L5F] 
XBB.1.5      100243    464   0.5%   1 -[R408S] 

AY.25.1       95457  62597  65.6%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.25.1       95457   6554   6.9%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.25.1       95457    951   1.0%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,A846S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.25.1       95457    792   0.8%   1 +[L5F,T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.25.1       95457    622   0.7%   1 +[T19R,V70F,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.25         93231  34604  37.1%   0 +[T19R,S112L,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.25         93231  19124  20.5%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.25         93231   8339   8.9%   1 +[T19R,S112L,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.25         93231   4730   5.1%   2 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.25         93231   1367   1.5%   1 +[T19R,S112L,E156G,F157-,R158-,L452R,A522V,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.3        87106  65526  75.2%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.3        87106   3548   4.1%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.3        87106   1414   1.6%   1 +[L5F,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3        87106    837   1.0%   2 +[V213G,G339D,Q493R]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.3        87106    553   0.6%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

BA.1.15       84332  65628  77.8%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.15       84332   2949   3.5%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.15       84332    919   1.1%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,K854N,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.15       84332    708   0.8%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 
BA.1.15       84332    618   0.7%   4 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,L452R,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,F486P,F490S] 

B.1           81664  52499  64.3%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1           81664   1410   1.7%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1           81664   1242   1.5%   1 +[D936Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1           81664    846   1.0%   2 +[M153T,G769V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1           81664    683   0.8%   1 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.1.17.2     80839  58941  72.9%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,A701V,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.17.2     80839   5598   6.9%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,F643L,A701V,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.17.2     80839   1973   2.4%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,S371L,Q493R,G496S,T547K,A701V,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.17.2     80839    518   0.6%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,A701V,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.17.2     80839    399   0.5%   5 +[A67V,H69-,V70-,T95I,V143-,Y145-,G339D,S371L,Q493R,G496S,T547K,A701V,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

AY.29         79751  58984  74.0%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.29         79751   1471   1.8%   1 +[T19R,T95I,E156G,F157-,R158-,R237S,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.29         79751   1449   1.8%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.29         79751   1079   1.4%   1 +[L5F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.29         79751    820   1.0%   1 +[T19R,T95I,E156G,F157-,R158-,R408I,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.5          72419  56700  78.3%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.5          72419    725   1.0%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.5          72419    624   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BF.5          72419    437   0.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.5          72419    266   0.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A1020S]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.4.2        72005  50779  70.5%   0 +[T19R,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4.2        72005   1345   1.9%   1 +[T19R,V36F,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.2        72005    997   1.4%   1 +[T19R,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,D950N,H1083Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.2        72005    692   1.0%   1 +[L5F,T19R,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.2        72005    665   0.9%   1 +[T19R,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.177       59883  23548  39.3%   0 +[L18F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177       59883  12711  21.2%   1 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177       59883   3483   5.8%   3 +[A222V,A262S,P272L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177       59883   1260   2.1%   2 +[A222V,Q675H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177       59883    959   1.6%   3 +[A222V,D1163Y,G1167V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

P.1           58599  34625  59.1%   0 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
P.1           58599   1582   2.7%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,A688V,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1           58599   1491   2.5%   1 +[L18F,T20N,P26S,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1           58599   1483   2.5%   1 +[L18F,T20N,P26S,D138Y,R190S,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1           58599    575   1.0%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,D427N,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.1.1.2      58295  51956  89.1%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.1.2      58295   1005   1.7%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,M153T,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.2      58295    515   0.9%   1 +[A67V,H69-,V70-,T76I,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.2      58295    334   0.6%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.2      58295    270   0.5%   1 +[A67V,H69-,V70-,D88E,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

AY.100        58216  30444  52.3%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.100        58216   7739  13.3%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.100        58216    654   1.1%   1 +[T19R,T95I,E156G,F157-,R158-,T385I,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.100        58216    626   1.1%   1 +[L5F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.100        58216    569   1.0%   1 +[T19R,P82T,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.5        46345  36276  78.3%   0 +[H69-,V70-,T76I,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.5        46345    806   1.7%   1 +[H69-,V70-,T76I,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.5        46345    632   1.4%   1 +[H69-,V70-,T76I,V213G,G339D,L452R,F486V,K1073T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.5        46345    463   1.0%   1 +[H69-,V70-,T76I,V213G,G339D,L452R,F486V,T883I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.5        46345    384   0.8%   1 +[L5F,H69-,V70-,T76I,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.4.1        45473  36312  79.9%   0 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.4.1        45473    936   2.1%   1 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.4.1        45473    846   1.9%   1 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.4.1        45473    207   0.5%   1 +[V3G,H69-,V70-,V213G,G339D,R346I,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.1        45473    181   0.4%   1 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.1.18       43752  18674  42.7%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.18       43752  18191  41.6%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.18       43752    934   2.1%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.18       43752    791   1.8%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 
BA.1.18       43752    387   0.9%   4 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

AY.5          42578  28029  65.8%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.5          42578   3651   8.6%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.5          42578    703   1.7%   1 +[T19R,E156G,F157-,R158-,L452R,Q613H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.5          42578    427   1.0%   1 +[T19R,E156G,F157-,R158-,T376I,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.5          42578    345   0.8%   2 +[T19R,E156G,F157-,R158-,L452R,Q613H,P681R,V772I,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.10       41666  33369  80.1%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.10       41666   1068   2.6%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.10       41666    817   2.0%   1 +[V213G,G339D,Q493R,S939F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.10       41666    559   1.3%   4 +[V213G,G339D,Q493R]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.10       41666    455   1.1%   1 +[V213G,G339D,Q493R]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.4.6        40494  30947  76.4%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.4.6        40494    671   1.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.4.6        40494    435   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.4.6        40494    302   0.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,N658S]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.6        40494    273   0.7%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.1         40187  24049  59.8%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1         40187    799   2.0%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.1         40187    366   0.9%   3 +[W152L,E484K,G769V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1         40187    361   0.9%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1         40187    264   0.7%   1 +[L18F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BE.1.1        37058  28093  75.8%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BE.1.1        37058    899   2.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BE.1.1        37058    320   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BE.1.1        37058    291   0.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.1.1        37058    268   0.7%   2 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

BF.7          36456  25150  69.0%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.7          36456    642   1.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.7          36456    470   1.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7          36456    345   0.9%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7          36456    254   0.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

BQ.1          36187  19238  53.2%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1          36187   6297  17.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1          36187    595   1.6%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1          36187    359   1.0%   1 +[H69-,V70-,H146-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1          36187    347   1.0%   1 +[H69-,V70-,V213G,P251H,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

AY.39         35046  16481  47.0%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.39         35046   4161  11.9%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.39         35046   1118   3.2%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,K1073N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.39         35046    807   2.3%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,T572I,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.39         35046    792   2.3%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.526       34681  15210  43.9%   0 +[L5F,T95I,D253G,E484K,A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.526       34681   5986  17.3%   4 +[L5F,T95I,D253G,Q957R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.526       34681   2135   6.2%   2 +[L5F,T95I,D253G,A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.526       34681   1051   3.0%   1 +[L5F,T95I,D253G,A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.526       34681    791   2.3%   5 +[L5F,L18F,T95I,D253G,Q957R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.6        31224  24203  77.5%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.6        31224    436   1.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.6        31224    359   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.5.6        31224    181   0.6%   1 +[H69-,V70-,V213G,G339D,K444R,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.6        31224    154   0.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.98         31010  16094  51.9%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.98         31010   1696   5.5%   2 +[T19R,E156G,F157-,R158-,P251L,L452R,P681R,D950N,D1127G]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.98         31010   1492   4.8%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,G1219V]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.98         31010    951   3.1%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.98         31010    943   3.0%   1 +[T19R,E96V,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.1.17       30486  22597  74.1%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.17       30486   1027   3.4%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.17       30486    724   2.4%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F,S1147L]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.17       30486    315   1.0%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 
BA.1.17       30486    288   0.9%   5 +[A67V,H69-,V70-,T95I,V143-,Y145-,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

AY.9.2        29922  16098  53.8%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.9.2        29922   3841  12.8%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.9.2        29922    945   3.2%   1 +[T19R,A67V,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.9.2        29922    348   1.2%   1 +[T19R,E156G,F157-,R158-,D215H,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.9.2        29922    291   1.0%   2 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,G1124V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.126        27968  10893  38.9%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,I850L,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.126        27968   2892  10.3%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,I850L,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.126        27968    491   1.8%   3 +[T19R,E156G,F157-,R158-,L452R,P681R,S689I,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.126        27968    474   1.7%   1 +[T19R,T95I,E156G,F157-,R158-,E281Q,L452R,P681R,I850L,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.126        27968    460   1.6%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.1.1.18     27494  22714  82.6%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.1.18     27494    570   2.1%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.18     27494    293   1.1%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.1.1.18     27494    208   0.8%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.18     27494    190   0.7%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 

AY.26         27334   7199  26.3%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.26         27334   5538  20.3%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,N1074S,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.26         27334   2582   9.4%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.26         27334   2196   8.0%   2 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,N1074S,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.26         27334    619   2.3%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,T547I,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.160       26960  19966  74.1%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.160       26960    386   1.4%   1 +[T20I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.160       26960    196   0.7%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.160       26960    192   0.7%   1 +[A1078S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.160       26960    177   0.7%   1 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.4          26042  10699  41.1%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.4          26042   7731  29.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4          26042    575   2.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.4          26042    398   1.5%   2 +[H69-,V70-,V213G,G339D,L452R,F486V,S640F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4          26042    382   1.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,N658S,D936N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.47         25965  14748  56.8%   0 +[T19R,E156G,F157-,R158-,A222V,V289I,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.47         25965   5225  20.1%   1 +[T19R,E156G,F157-,R158-,A222V,V289I,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.47         25965    364   1.4%   2 +[T19R,E156G,F157-,R158-,A222V,V289I,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.47         25965    211   0.8%   1 +[L5F,T19R,E156G,F157-,R158-,A222V,V289I,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.47         25965    111   0.4%   2 +[L5F,T19R,E156G,F157-,R158-,A222V,V289I,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.1.1.1      25838  19431  75.2%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.1.1      25838    818   3.2%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 
BA.1.1.1      25838    715   2.8%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.1      25838    252   1.0%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F,D1259H]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.1      25838    240   0.9%   4 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 

B.1.429       24706  16100  65.2%   0 +[S13I,W152C,L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.429       24706   1981   8.0%   1 +[S13I,P26S,W152C,L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.429       24706    263   1.1%   1 +[L5F,S13I,W152C,L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.429       24706    227   0.9%   1 +[S13I,W152C,A222V,L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.429       24706    134   0.5%   1 +[S13I,W152C,L452R,L938F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.4.2.2      24247  13890  57.3%   0 +[T19R,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4.2.2      24247   2166   8.9%   1 +[S13T,T19R,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.2.2      24247   1339   5.5%   1 +[T19R,T95I,Y145H,E156G,F157-,R158-,A222V,T299I,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.2.2      24247   1008   4.2%   1 +[T19R,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,D950N,V1133I,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.2.2      24247    930   3.8%   1 +[L18F,T19R,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.119        24235   8736  36.0%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.119        24235   4554  18.8%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,P809S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.119        24235   1921   7.9%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.119        24235   1232   5.1%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,P809S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.119        24235    420   1.7%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,P809S,G946R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.120        21320  11446  53.7%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.120        21320   3186  14.9%   1 +[T19R,T51I,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.120        21320    532   2.5%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.120        21320    303   1.4%   1 +[T19R,T95I,E156G,F157-,R158-,V407I,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.120        21320    285   1.3%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,R1091H]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

EG.5.1.1      20954  12487  59.6%   0 +[Q52H,F456L] (consensus)
EG.5.1.1      20954   1123   5.4%   1 +[Q52H,L455F,F456L] 
EG.5.1.1      20954    482   2.3%   1 +[Q52H,H146K,F456L]-[H146Q] 
EG.5.1.1      20954    276   1.3%   1 +[Q52H,F456L,S494P] 
EG.5.1.1      20954    196   0.9%   1 +[Q14R,Q52H,F456L] 

AY.98.1       20490   9842  48.0%   0 +[T19R,E156G,F157-,R158-,P251L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.98.1       20490   4504  22.0%   1 +[T19R,E156G,F157-,R158-,P251L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.98.1       20490    421   2.1%   1 +[T19R,D80Y,E156G,F157-,R158-,P251L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.98.1       20490    301   1.5%   2 +[T19R,E156G,F157-,R158-,P251L,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.98.1       20490    233   1.1%   1 +[T19R,E156G,F157-,R158-,P251L,L452R,P681R,A942S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

Unassigned    20113   5128  25.5%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
Unassigned    20113   1935   9.6%   5 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
Unassigned    20113   1743   8.7%  30 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
Unassigned    20113   1145   5.7%  33 +[I210T,E484K,D936N,S939F,T1027I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
Unassigned    20113    864   4.3%  35 +[H69-,V70-,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

BA.5          19923  13122  65.9%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5          19923    519   2.6%   1 +[H69-,V70-,V213G,S255F,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5          19923    389   2.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5          19923    333   1.7%   1 +[H69-,V70-,V213G,G339D,L452R,N460S,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5          19923    270   1.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.121        19900   7583  38.1%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.121        19900   3276  16.5%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.121        19900    683   3.4%   1 +[T19R,T95I,E156G,F157-,R158-,E180Q,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.121        19900    221   1.1%   2 +[T19R,T95I,E156G,F157-,R158-,E180Q,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.121        19900    191   1.0%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BE.1          19891  13486  67.8%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BE.1          19891    854   4.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.1          19891    835   4.2%   1 +[H69-,V70-,M153I,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.1          19891    311   1.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BE.1          19891    140   0.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

AY.20         19848   5738  28.9%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,V1104L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.20         19848   2846  14.3%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,V1104L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.20         19848   2014  10.1%   1 +[T19R,T95I,K97E,E156G,F157-,R158-,L452R,P681R,D950N,V1104L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.20         19848    973   4.9%   2 +[T19R,T95I,K97E,E156G,F157-,R158-,L452R,P681R,D950N,V1104L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.20         19848    714   3.6%   2 +[T19R,T95I,K97E,E156G,F157-,R158-,L452R,P681R,D950N,V1104L,V1177I]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.99.2       19628   8174  41.6%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.99.2       19628   4075  20.8%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.99.2       19628   1444   7.4%   1 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.99.2       19628    192   1.0%   1 +[T19R,E156G,F157-,R158-,D178H,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.99.2       19628    142   0.7%   1 +[T19R,E156G,F157-,R158-,L452R,S640F,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.1.214     19354  11097  57.3%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.214     19354   2871  14.8%   1 +[Q675H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.214     19354    701   3.6%   1 +[I720V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.214     19354    324   1.7%   1 +[S256L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.214     19354    319   1.6%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.1.519     19225  13178  68.5%   0 +[T732A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.519     19225    433   2.3%   1 +[L5F,T732A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.1.519     19225    235   1.2%   1 +[T732A,E1258D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.1.519     19225    190   1.0%   2 +[A292S,T604A,T732A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.1.519     19225    186   1.0%   1 +[P174S,T732A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

AY.6          18797  11225  59.7%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.6          18797   1569   8.3%   2 +[T19R,T22I,A67V,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.6          18797    444   2.4%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.6          18797    350   1.9%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,I1115V]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.6          18797    247   1.3%   1 +[T19R,E156G,F157-,R158-,L452R,V483F,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.127        18574   7036  37.9%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.127        18574   1354   7.3%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,T859N,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.127        18574   1053   5.7%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.127        18574    743   4.0%   1 +[L5F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.127        18574    624   3.4%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,D574N,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.27         18549  12063  65.0%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,Q613H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.27         18549   3029  16.3%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.27         18549    361   1.9%   1 +[T19R,E156G,F157-,R158-,L179F,A222V,L452R,Q613H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.27         18549    247   1.3%   1 +[L18F,T19R,E156G,F157-,R158-,A222V,L452R,Q613H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.27         18549    207   1.1%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,Q613H,P681R,A684S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.10         18123  13138  72.5%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.10         18123    805   4.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.10         18123    179   1.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.10         18123    176   1.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.10         18123    153   0.8%   2 +[W64C,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.125        17341   8314  47.9%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.125        17341   4197  24.2%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.125        17341    292   1.7%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.125        17341    291   1.7%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,A879S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.125        17341    208   1.2%   1 +[L18F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.16      17191   9607  55.9%   0 +[E180V,T478R]-[T478K] (consensus)
XBB.1.16      17191    355   2.1%   1 +[E180V,T478R]-[K417N,T478K] 
XBB.1.16      17191    256   1.5%   1 +[H146K,E180V,T478R]-[H146Q,T478K] 
XBB.1.16      17191    169   1.0%   1 +[L5F,E180V,T478R]-[T478K] 
XBB.1.16      17191    164   1.0%   3 +[E180V,T478R,Q613H,Q675K,V1230A]-[T478K] 

BA.5.2.20     17031  11504  67.5%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.20     17031    467   2.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.20     17031    323   1.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.20     17031    241   1.4%   1 +[H69-,V70-,K147T,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.20     17031    220   1.3%   1 +[H69-,V70-,V213G,G339D,N450D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

P.1.14        16997  10686  62.9%   0 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
P.1.14        16997    905   5.3%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F,S1252F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.14        16997    341   2.0%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,I844V,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.14        16997    311   1.8%   1 +[L18F,T20N,P26S,D138Y,R190S,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.14        16997    277   1.6%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,L938F,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.1.20       16377  12894  78.7%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.20       16377    473   2.9%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.20       16377    148   0.9%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 
BA.1.20       16377    123   0.8%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.1.20       16377    106   0.6%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

AY.46.6       16096   7205  44.8%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.46.6       16096   3434  21.3%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46.6       16096    333   2.1%   1 +[T19R,H69Y,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46.6       16096    300   1.9%   1 +[T19R,E156G,F157-,R158-,T323K,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46.6       16096    238   1.5%   2 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.1.15.1     16094  13375  83.1%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F,I1081V]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.15.1     16094    300   1.9%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,S371L,Q493R,G496S,T547K,N856K,L981F,I1081V]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.15.1     16094    120   0.7%   1 +[A67V,H69-,V70-,T95I,D138N,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F,I1081V]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.15.1     16094    101   0.6%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F,I1081V]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.15.1     16094     77   0.5%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F,I1081V]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 

AY.42         15953   3743  23.5%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.42         15953   3019  18.9%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,T719I,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.42         15953   2002  12.5%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,T719I,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.42         15953   1743  10.9%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.42         15953    268   1.7%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,T719I,T732I,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.75         15244   8489  55.7%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.75         15244   2463  16.2%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.75         15244    167   1.1%   2 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.75         15244    141   0.9%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,T1231A]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.75         15244    129   0.8%   1 +[T19R,E156G,F157-,R158-,A222V,P251L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.4.2.1      15089  11804  78.2%   0 +[T19R,V36F,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4.2.1      15089    359   2.4%   1 +[T19R,V36F,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,A899S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.2.1      15089    262   1.7%   1 +[T19R,V36F,G75R,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.2.1      15089    206   1.4%   1 +[T19R,V36F,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,D950N,N1187S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.2.1      15089    197   1.3%   1 +[T19R,V36F,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,P809L,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.5        15055  14505  96.3%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.5        15055     57   0.4%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.5        15055     46   0.3%   1 +[V213G,R214H,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.5        15055     34   0.2%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.2.5        15055     26   0.2%   1 +[L5F,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.2.23       14663  12681  86.5%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.23       14663    177   1.2%   1 +[V213G,G339D,Q493R,P1162S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.23       14663    114   0.8%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.23       14663    111   0.8%   2 +[V213G,G339D,K356R,Q493R,A845G]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.23       14663     99   0.7%   1 +[K187R,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.118        14506   8207  56.6%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.118        14506   2310  15.9%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.118        14506    476   3.3%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.118        14506    160   1.1%   1 +[V11I,T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.118        14506    127   0.9%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

HV.1          13537   9246  68.3%   0 +[Q52H,F157L,L452R,F456L] (consensus)
HV.1          13537    460   3.4%   1 +[Q52H,H146K,F157L,L452R,F456L]-[H146Q] 
HV.1          13537    227   1.7%   1 +[Q52H,F157L,K444T,L452R,F456L] 
HV.1          13537    154   1.1%   1 +[Q52H,F157L,L452R,F456L,A1078S] 
HV.1          13537    144   1.1%   1 +[Q52H,F157L,L452R,F456L]-[H146Q] 

AY.23         13275   7496  56.5%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.23         13275   1404  10.6%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.23         13275    353   2.7%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,A845S,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.23         13275    172   1.3%   3 +[T19R,H69-,V70-,E156G,F157-,R158-,D215N,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.23         13275    142   1.1%   1 +[T19R,E156G,F157-,R158-,D215Y,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.2.9      13078   9653  73.8%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.9      13078    405   3.1%   1 +[H69-,V70-,V213G,G339D,R346S,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.9      13078    261   2.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.9      13078    121   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.9      13078     91   0.7%   1 +[H69-,V70-,V213G,G339D,N450D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.2.6      13061   8450  64.7%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.6      13061    799   6.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.6      13061    149   1.1%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.6      13061    126   1.0%   1 +[H69-,V70-,Q183P,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.6      13061    124   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

BA.5.1.30     12982  10197  78.5%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.30     12982    276   2.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.30     12982    224   1.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.30     12982    113   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.30     12982     98   0.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A688V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.39.1       12881   8311  64.5%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.39.1       12881   1655  12.8%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.39.1       12881    197   1.5%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.39.1       12881    163   1.3%   1 +[T19R,T95I,E156G,F157-,R158-,V227I,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.39.1       12881    133   1.0%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,S813N,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.243       12852   4291  33.4%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] (consensus)
B.1.243       12852   2773  21.6%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.243       12852    613   4.8%   2 +[Q675H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.243       12852    374   2.9%   3 +[A520S,Q675H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.243       12852    373   2.9%   1 +[Q1071L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

BA.2.1        12788  11081  86.7%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.1        12788    201   1.6%   1 +[V213G,T240P,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.1        12788    171   1.3%   1 +[V213G,G339D,L452M,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.1        12788    101   0.8%   1 +[V213G,G339D,Q493R,E654Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.1        12788     96   0.8%   1 +[V213G,A262S,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.1.22     12733   9583  75.3%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.22     12733    516   4.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.22     12733    314   2.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.22     12733    106   0.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.22     12733     93   0.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,L1244F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

CH.1.1        12612   8477  67.2%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
CH.1.1        12612    140   1.1%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S,Q1113K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1        12612    121   1.0%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S,P621S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1        12612    112   0.9%   5 +[K147E,W152R,F157L,+209V,N211G,L212-,V213-,G257S,K444T,L452R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1        12612     90   0.7%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,T323A,K444T,L452R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

AY.33         12403   2662  21.5%   0 +[T19R,T29A,E156G,F157-,R158-,T250I,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.33         12403   2002  16.1%   2 +[T19R,T29A,E156G,F157-,R158-,T250I,T299I,L452R,Q613H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.33         12403   1299  10.5%   1 +[T19R,T29A,E156G,F157-,R158-,T250I,L452R,Q613H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.33         12403    817   6.6%   3 +[T19R,T29A,E156G,F157-,R158-,T250I,T299I,L452R,Q613H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.33         12403    666   5.4%   1 +[T19R,T29A,E156G,F157-,R158-,T250I,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.258       12082   5481  45.4%   0 +[H69-,V70-,N439K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.258       12082   1680  13.9%   2 +[N439K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.258       12082    280   2.3%   3 +[N439K,A688V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.258       12082    270   2.2%   2 +[H69-,V70-,L189F,N439K,V772I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.258       12082    217   1.8%   1 +[H69-,V70-,N439K,L1063F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.177.21    12057   9282  77.0%   0 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.21    12057    669   5.5%   1 +[A222V,G1219C]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.21    12057    471   3.9%   1 +[A222V,P812S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.21    12057    135   1.1%   1 +[W64C,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.21    12057    129   1.1%   1 +[G181R,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

EG.5.1        11950   7213  60.4%   0 +[Q52H,F456L] (consensus)
EG.5.1        11950    324   2.7%   1 +[Q52H,H146K,F456L]-[H146Q] 
EG.5.1        11950    215   1.8%   1 +[T19L,Q52H,F456L]-[T19I] 
EG.5.1        11950    157   1.3%   1 +[Q52H,L455F,F456L] 
EG.5.1        11950     98   0.8%   2 +[Q52H,H146K,G261V,F456L]-[H146Q] 

BA.5.1.23     11931   8675  72.7%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.23     11931    318   2.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.23     11931    156   1.3%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.23     11931    118   1.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.23     11931     92   0.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A879S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.2.3.1      11654  10260  88.0%   0 +[V213G,G339D,Q493R,Q677E]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.3.1      11654    100   0.9%   1 +[V213G,G339D,Q493R,Q677E,R847K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.1      11654     74   0.6%   1 +[V213G,G339D,Q493R,Q677E,T732I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.1      11654     67   0.6%   1 +[V213G,G339D,Q493R,Q677E,R1014K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.1      11654     56   0.5%   1 +[L5F,V213G,G339D,Q493R,Q677E]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.221       11592   8371  72.2%   0 +[S98F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.221       11592    332   2.9%   1 +[S98F,S1252F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.221       11592    112   1.0%   1 +[S98F,P812S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.221       11592     98   0.8%   1 +[S98F,K182R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.221       11592     85   0.7%   2 +[S98F,A1078S,S1252F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.3.1        11388   5771  50.7%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.3.1        11388   2328  20.4%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.3.1        11388    178   1.6%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,A846V,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.3.1        11388    125   1.1%   2 +[T19R,E156G,F157-,R158-,L452R,P681R,A701V,A846V,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.3.1        11388    116   1.0%   2 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.1.1.14     10741   8921  83.1%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.1.14     10741    134   1.2%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.14     10741    133   1.2%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.14     10741     88   0.8%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 
BA.1.1.14     10741     71   0.7%   4 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 

BA.5.1.1      10706   8268  77.2%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.1      10706    162   1.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.1      10706    117   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.1      10706    106   1.0%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.1      10706     86   0.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

AY.117        10635   5882  55.3%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.117        10635   1414  13.3%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.117        10635    275   2.6%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,D1163Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.117        10635    158   1.5%   1 +[T19R,T95I,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.117        10635    113   1.1%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,D1199N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.637       10513   5620  53.5%   0 +[D80G,F157S,L452R,T859N,D950H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.637       10513    859   8.2%   1 +[D80G,F157S,L452R,T791I,T859N,D950H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.637       10513    356   3.4%   1 +[D80G,S155R,F157S,L452R,T859N,D950H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.637       10513    289   2.7%   1 +[D80G,F157S,L452R,T859N,D950H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.637       10513    169   1.6%   2 +[H69Y,D80G,F157S,L452R,T791I,T859N,D950H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.46.5       10272   8223  80.1%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.46.5       10272    224   2.2%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46.5       10272    118   1.1%   1 +[T19R,E156G,F157-,R158-,L452R,E583D,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46.5       10272    115   1.1%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46.5       10272    109   1.1%   1 +[T19R,E156G,F157-,R158-,L452R,Q677H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

HK.3          10229   6104  59.7%   0 +[Q52H,L455F,F456L] (consensus)
HK.3          10229    201   2.0%   1 +[Q52H,H146K,L455F,F456L]-[H146Q] 
HK.3          10229    159   1.6%   1 +[Q52H,P174S,L455F,F456L] 
HK.3          10229    119   1.2%   1 +[Q52H,L455F,F456L,P809S] 
HK.3          10229     77   0.8%   1 +[L5F,Q52H,L455F,F456L] 

B.1.351       10207   2906  28.5%   0 +[D80A,D215G,L242-,A243-,L244-,E484K,A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.351       10207   2296  22.5%   1 +[L18F,D80A,D215G,L242-,A243-,L244-,E484K,A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.351       10207    434   4.3%   2 +[L18F,D80A,D215G,L242-,A243-,L244-,E484K,A701V,A899S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.351       10207    402   3.9%   1 +[D80A,D215G,L242-,A243-,L244-,E484K,A701V]-[T19I,L24-,P25-,P26-,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.351       10207    196   1.9%   2 +[L18F,D80A,D215G,L242-,A243-,L244-,P384L,E484K,A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.69          9965   3872  38.9%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.69          9965   2635  26.4%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.69          9965    818   8.2%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.69          9965    196   2.0%   2 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.69          9965    127   1.3%   1 +[T19R,T95I,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.1.1.15      9917   8247  83.2%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.1.15      9917    269   2.7%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.15      9917    151   1.5%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.15      9917     97   1.0%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.15      9917     53   0.5%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,V826L,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

XBB.1          9853   5831  59.2%   0 +[F486S]-[F486P] (consensus)
XBB.1          9853    323   3.3%   1 +[F486S]-[K417N,F486P] 
XBB.1          9853    167   1.7%   1 +[H146K,F486S]-[H146Q,F486P] 
XBB.1          9853    108   1.1%   1 +[F486S]-[G142D,F486P] 
XBB.1          9853     97   1.0%   4 -[S477N,T478K,E484A,F486P] 

B.1.1.284      9587   3747  39.1%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.284      9587   3580  37.3%   1 +[M153T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.284      9587    486   5.1%   3 +[M153T,G184S,Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.284      9587    185   1.9%   2 +[M153T,P793S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.284      9587    135   1.4%   2 +[M153T,S255Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

FL.1.5.1       9551   6342  66.4%   0 +[F456L,T478R,A701V]-[T478K] (consensus)
FL.1.5.1       9551    182   1.9%   1 +[H146K,F456L,T478R,A701V]-[H146Q,T478K] 
FL.1.5.1       9551    144   1.5%   1 +[F456L,T478R,E554K,A701V]-[T478K] 
FL.1.5.1       9551    100   1.0%   1 +[F456L,T478R,A701V]-[K417N,T478K] 
FL.1.5.1       9551     84   0.9%   1 +[L5F,F456L,T478R,A701V]-[T478K] 

BA.2.18        9513   7886  82.9%   0 +[V213G,G339D,K417T,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.18        9513    202   2.1%   1 +[V213G,S254F,G339D,K417T,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,N460K,F486P,F490S] 
BA.2.18        9513    184   1.9%   1 +[L176F,V213G,G339D,K417T,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,N460K,F486P,F490S] 
BA.2.18        9513    180   1.9%   1 +[V213G,G339D,K417T,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.18        9513     76   0.8%   1 +[L5F,V213G,G339D,K417T,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,N460K,F486P,F490S] 

B.1.427        9388   4531  48.3%   0 +[S13I,W152C,L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.427        9388   1723  18.4%   1 +[S13I,W152C,W258L,L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.427        9388    493   5.3%   1 +[S13I,W152C,L452R,S1252F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.427        9388    158   1.7%   1 +[P9L,S13I,W152C,L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.427        9388     99   1.1%   1 +[L5F,S13I,W152C,L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.21          9268   7623  82.3%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.21          9268    103   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T1116N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.21          9268     98   1.1%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.21          9268     90   1.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,S691P]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.21          9268     68   0.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.4.6         9218   6232  67.6%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4.6         9218    714   7.7%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,E484Q,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.6         9218    501   5.4%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,M1237I]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.6         9218    287   3.1%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.6         9218    120   1.3%   1 +[T19R,T95I,E156G,F157-,R158-,A222S,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BN.1.3         9164   6116  66.7%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
BN.1.3         9164    115   1.3%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,R408S,V445P,F486P] 
BN.1.3         9164     83   0.9%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,N481K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.3         9164     70   0.8%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,P631S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.3         9164     54   0.6%   1 +[K147E,W152R,F157L,I210V,V213G,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 

BA.2.29        9162   8134  88.8%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.29        9162    121   1.3%   1 +[L5F,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.29        9162     96   1.0%   1 +[V213G,G339D,Q493R,N703H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.29        9162     34   0.4%   1 +[V213G,G339D,Q493R,S939F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.29        9162     31   0.3%   1 +[V213G,G339D,Q493R,A845S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.36          9108   4965  54.5%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,V1104L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.36          9108    982  10.8%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,V1104L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.36          9108    744   8.2%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,E484Q,P681R,D950N,V1104L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.36          9108    157   1.7%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,E484Q,P681R,D950N,V1104L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.36          9108    122   1.3%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,V1104L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

R.1            9024   6718  74.4%   0 +[W152L,E484K,G769V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
R.1            9024    308   3.4%   1 +[W152L,E484K,G769V,K795N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
R.1            9024    277   3.1%   1 +[W152L,E484K,G769V,G1219V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
R.1            9024    118   1.3%   1 +[W152L,E484K,N751D,G769V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
R.1            9024    117   1.3%   1 +[W152L,S255F,E484K,G769V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.26          8952   5278  59.0%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.26          8952    925  10.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.26          8952    343   3.8%   1 +[H69-,V70-,V213G,G339D,R346S,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.26          8952    132   1.5%   1 +[T22I,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.26          8952    100   1.1%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.1.10      8821   5386  61.1%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.10      8821    687   7.8%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.10      8821    141   1.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.10      8821    115   1.3%   3 +[L5F,I68-,H69-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.10      8821    114   1.3%   1 +[H69-,V70-,Y145H,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.9           8565   5944  69.4%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.9           8565    412   4.8%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.9           8565    190   2.2%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.9           8565    145   1.7%   1 +[T19R,E156G,F157-,R158-,L189F,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.9           8565     91   1.1%   1 +[T19R,D138Y,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.24        8448   7400  87.6%   0 +[V213G,G339N,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.24        8448    103   1.2%   1 +[L5F,V213G,G339N,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.24        8448     93   1.1%   1 +[V213G,G339N,Q493R,I844V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.24        8448     49   0.6%   2 +[F157S,V213G,G339N,Q493R,V1264M]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.24        8448     46   0.5%   1 +[V213G,G339N,Q493R,D1153Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.113         8305   4947  59.6%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.113         8305    907  10.9%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.113         8305     81   1.0%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.113         8305     80   1.0%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,Q954H,N969K] 
AY.113         8305     51   0.6%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,K1073N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.4.5         8214   5151  62.7%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,D1259Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4.5         8214    304   3.7%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,D1259Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.5         8214    113   1.4%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D796H,D950N,D1259Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.5         8214    113   1.4%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,G769V,D950N,D1259Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.5         8214    105   1.3%   1 +[L18F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,D1259Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.16.6     8071   5674  70.3%   0 +[E180V,F456L,T478R]-[T478K] (consensus)
XBB.1.16.6     8071    279   3.5%   1 +[H146K,E180V,F456L,T478R]-[H146Q,T478K] 
XBB.1.16.6     8071    197   2.4%   1 +[E180V,L455F,F456L,T478R]-[T478K] 
XBB.1.16.6     8071     84   1.0%   1 +[E180V,F456L,T478R]-[K417N,T478K] 
XBB.1.16.6     8071     70   0.9%   1 +[E180V,F456L,T478R,L938F]-[T478K] 

D.2            7932   6784  85.5%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
D.2            7932    205   2.6%   1 +[V1068F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
D.2            7932    135   1.7%   1 +[T632N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
D.2            7932     79   1.0%   1 +[A930V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
D.2            7932     73   0.9%   1 +[S698L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.14          7921   5178  65.4%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.14          7921   1084  13.7%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.14          7921    108   1.4%   2 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.14          7921     81   1.0%   2 +[T19R,E156G,F157-,R158-,A348S,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.14          7921     49   0.6%   1 +[T19R,E156G,F157-,R158-,L452R,T547I,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.2.21      7861   5539  70.5%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.21      7861    328   4.2%   1 +[H69-,V70-,H146Y,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.21      7861     85   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,V1137I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.21      7861     78   1.0%   1 +[H69-,V70-,V213G,S255F,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.21      7861     76   1.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

AY.119.2       7843   4407  56.2%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,Q675H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.119.2       7843    895  11.4%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q675H,P681R,D950N,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.119.2       7843    749   9.5%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q675H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.119.2       7843    184   2.3%   1 +[L5F,T19R,T95I,E156G,F157-,R158-,L452R,Q675H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.119.2       7843    107   1.4%   1 +[T19R,T95I,E156G,F157-,R158-,G181V,L452R,Q675H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.36        7646   5789  75.7%   0 +[I68T,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.36        7646    280   3.7%   1 +[I68T,V213G,G339D,Q493R,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.36        7646    235   3.1%   1 +[I68T,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.36        7646     93   1.2%   2 +[I68T,V213G,Y248H,G339D,Q493R,T791I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.36        7646     57   0.7%   1 +[I68T,T73N,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BF.1           7603   5992  78.8%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.1           7603    125   1.6%   1 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.1           7603    105   1.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,N460K,F486P,F490S] 
BF.1           7603     97   1.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T1009I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.1           7603     72   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BQ.1.1.18      7529   4960  65.9%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.18      7529    448   6.0%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.18      7529    169   2.2%   1 +[H69-,V70-,V213G,Y248H,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.18      7529     75   1.0%   1 +[L5F,H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.18      7529     67   0.9%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,K417N,V445P,G446S,F486P,F490S] 

XBB.1.9.1      7511   4309  57.4%   0  (consensus)
XBB.1.9.1      7511    155   2.1%   1 +[H146K]-[H146Q] 
XBB.1.9.1      7511     97   1.3%   1 +[T478R]-[T478K] 
XBB.1.9.1      7511     93   1.2%   1 -[K417N] 
XBB.1.9.1      7511     88   1.2%   1 +[L5F] 

AY.129         7469   3766  50.4%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.129         7469   1906  25.5%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.129         7469    168   2.2%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.129         7469    146   2.0%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,Q613H,P681R,D950N,D1163Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.129         7469     38   0.5%   1 +[P9S,T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BE.3           7464   5695  76.3%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BE.3           7464    228   3.1%   1 +[H69-,V70-,V213G,I231T,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.3           7464    145   1.9%   1 +[H69-,V70-,V213G,S254F,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.3           7464     78   1.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BE.3           7464     49   0.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

BQ.1.1.4       7332   4520  61.6%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.4       7332    643   8.8%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.4       7332    143   2.0%   2 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,Q675H]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.4       7332    127   1.7%   1 +[H69-,V70-,W152R,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.4       7332     70   1.0%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,A701S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BQ.1.2         7205   4677  64.9%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,I666V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.2         7205    249   3.5%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,I666V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.2         7205    177   2.5%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,I666V,C1243F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.2         7205    122   1.7%   1 +[L5F,H69-,V70-,V213G,G339D,K444T,L452R,F486V,I666V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.2         7205    111   1.5%   1 +[H69-,V70-,V213G,G339D,K444M,L452R,F486V,I666V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

C.37           7204   3673  51.0%   0 +[G75V,T76I,R246N,S247-,Y248-,L249-,T250-,P251-,G252-,D253-,L452Q,T859N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
C.37           7204    307   4.3%   1 +[G75V,T76I,R246N,S247-,Y248-,L249-,T250-,P251-,G252-,D253-,L452Q,Q675H,T859N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
C.37           7204    216   3.0%   1 +[G75V,T76I,R246N,S247-,Y248-,L249-,T250-,P251-,G252-,D253-,L452Q,I714V,T859N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
C.37           7204    102   1.4%  13 +[T63-,W64-,F65-,H66-,A67-,H69-,V70-,S71-,G72-,T73-,N74-,G75-,T76-,R246N,S247-,Y248-,L249-,T250-,P251-,G252-,D253-,L452Q,T859N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
C.37           7204     95   1.3%   8 +[G75V,T76I,L452Q,T859N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.54          7163   4235  59.1%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.54          7163   1216  17.0%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.54          7163     72   1.0%   2 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.54          7163     65   0.9%   1 +[T19R,T22I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.54          7163     51   0.7%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,N777S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.3.13      6969   5993  86.0%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.3.13      6969    162   2.3%   1 +[V213G,G339D,Q493R,P1143L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.13      6969     76   1.1%   1 +[L5F,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.13      6969     75   1.1%   1 +[M153I,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.13      6969     35   0.5%   1 +[V213G,G339D,Q493R,D1146H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.2.2         6959   6254  89.9%   0 +[V213G,G339D,Q493R,I1221T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.2         6959     55   0.8%   1 +[V213G,G339D,K356R,Q493R,I1221T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.2         6959     42   0.6%  29 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.2.2         6959     30   0.4%   1 +[L176F,V213G,G339D,Q493R,I1221T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.2         6959     29   0.4%   1 +[L5F,V213G,G339D,Q493R,I1221T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.234        6937   4134  59.6%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.234        6937    492   7.1%   1 +[P812L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.234        6937    354   5.1%   3 +[G142S,E180V,Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.234        6937    180   2.6%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,P681H,N764K,D796Y,Q954H,N969K] 
B.1.234        6937    138   2.0%   4 +[G142S,E180V,Q677H,S940F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.34          6913   3435  49.7%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.34          6913   1164  16.8%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.34          6913    151   2.2%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R,D950N,C1250F]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.34          6913    103   1.5%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R,D950N,A1016V]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.34          6913     99   1.4%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,E484Q,Q677H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.28          6863   3416  49.8%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.28          6863   1572  22.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A701S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.28          6863    162   2.4%   2 +[H69-,V70-,V213G,G339D,L452R,F486V,A701S,D820E]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.28          6863    142   2.1%   2 +[H69-,V70-,V213G,G339D,N450D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.28          6863     76   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.621        6848   3135  45.8%   0 +[T95I,+143T,Y144S,Y145N,R346K,E484K,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] (consensus)
B.1.621        6848    492   7.2%   1 +[T95I,+143T,Y144S,Y145N,R346K,E484K,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.621        6848    362   5.3%   1 +[T95I,+143T,Y144S,Y145N,R346K,E484K,D950N,M1229I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.621        6848    214   3.1%   1 +[T95I,Y144S,Y145N,R346K,E484K,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.621        6848    138   2.0%   1 +[T95I,+143T,Y144S,Y145N,R346K,E484K,T572I,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

BA.5.1.3       6832   5117  74.9%   0 +[H69-,V70-,V213G,V289I,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.3       6832    170   2.5%   1 +[H69-,V70-,V213G,V289I,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.3       6832    110   1.6%   1 +[H69-,V70-,V213G,D215V,V289I,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.3       6832     88   1.3%   1 +[L5F,H69-,V70-,V213G,V289I,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.3       6832     73   1.1%   1 +[H69-,V70-,V213G,V289I,G339D,L452R,F486V,T747I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BF.7.4.1       6800   5216  76.7%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.7.4.1       6800    151   2.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A701V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.4.1       6800     93   1.4%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.4.1       6800     63   0.9%   2 +[H69-,V70-,V213G,G339D,K444R,L452R,F486V,S939F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.4.1       6800     53   0.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,D745G]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

XBF            6797   5083  74.8%   0 +[K147E,W152R,F157L,I210V,V213G,G257S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P] (consensus)
XBF            6797     87   1.3%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,G446N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,G446S] 
XBF            6797     65   1.0%   1 +[W64L,K147E,W152R,F157L,I210V,V213G,G257S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P] 
XBF            6797     47   0.7%   1 +[L5F,K147E,W152R,F157L,I210V,V213G,G257S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P] 
XBF            6797     44   0.6%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,L1224V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P] 

BF.11          6795   4769  70.2%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.11          6795    112   1.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,Q607L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.11          6795    104   1.5%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.11          6795     83   1.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.11          6795     81   1.2%   1 +[T19L,H69-,V70-,V213G,G339D,L452R,F486V]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.258.17     6653   4995  75.1%   0 +[H69-,V70-,L189F,N439K,V772I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.258.17     6653    126   1.9%   1 +[P26L,H69-,V70-,L189F,N439K,V772I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.258.17     6653     65   1.0%   1 +[H69-,V70-,L189F,S256P,N439K,V772I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.258.17     6653     56   0.8%   1 +[H69-,V70-,L189F,N439K,V772I,S939F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.258.17     6653     52   0.8%   1 +[L5F,H69-,V70-,L189F,N439K,V772I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.46          6580   3535  53.7%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.46          6580    590   9.0%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46          6580    161   2.4%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,K835R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46          6580    156   2.4%   1 +[T19R,E132A,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46          6580     87   1.3%   2 +[T19R,T20I,E156G,F157-,R158-,L452R,S640F,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.8         6477   5997  92.6%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.8         6477     79   1.2%   1 +[V213G,G339D,Q493R,L938F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.8         6477     34   0.5%   1 +[L5F,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.8         6477     20   0.3%   1 +[V83F,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.8         6477     18   0.3%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

BC.1           6381   5803  90.9%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,I233V,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BC.1           6381     74   1.2%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,M153T,N211-,L212I,+214EPE,I233V,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BC.1           6381     67   1.0%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,I233V,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F,P1162L]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BC.1           6381     31   0.5%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,I233V,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BC.1           6381     24   0.4%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,I233V,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

EG.5.1.3       6278   4588  73.1%   0 +[Q52H,F456L] (consensus)
EG.5.1.3       6278    142   2.3%   1 +[Q52H,H146K,F456L]-[H146Q] 
EG.5.1.3       6278     69   1.1%   2 +[Q52H,L455F,F456L,S704L] 
EG.5.1.3       6278     50   0.8%   1 +[Q52H,F456L]-[Y144-] 
EG.5.1.3       6278     38   0.6%   1 +[Q52H,F456L]-[K417N] 

BA.2.56        6262   4454  71.1%   0 +[V213G,G339D,L452M,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.56        6262    271   4.3%   1 +[V213G,G339D,L452M,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.56        6262    182   2.9%   1 +[V213G,R214L,G339D,L452M,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.56        6262    103   1.6%   1 +[V213G,G339D,L452M,Q493R,Q787H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.56        6262    102   1.6%   1 +[V213G,G339D,L452M,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

B.1.438.1      6241   3694  59.2%   0 +[Q675H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.438.1      6241    632  10.1%   1 +[Q675H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.438.1      6241    563   9.0%   1 +[A653V,Q675H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.438.1      6241    206   3.3%   1 +[I233V,Q675H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.438.1      6241    153   2.5%   1 +[Q613H,Q675H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.1.5       6211   4137  66.6%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,P1263Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.5       6211    194   3.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,P1263Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.5       6211    105   1.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,M1229T,P1263Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.5       6211     74   1.2%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V,P1263Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.5       6211     68   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,P1263Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

AY.111         6210   4036  65.0%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.111         6210    314   5.1%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,K1191N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.111         6210    205   3.3%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,H1101Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.111         6210    120   1.9%   1 +[T19R,T95I,E156G,F157-,R158-,N354K,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.111         6210    108   1.7%   3 +[T19R,T95I,E156G,F157-,R158-,N211-,L212I,L452R,P681R,D950N,V1094I]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.1.2       6088   4761  78.2%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.2       6088    126   2.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.2       6088     83   1.4%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.2       6088     71   1.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,C1250Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.2       6088     64   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A570V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.9         6087   3862  63.4%   0 +[H69-,V70-,V213G,G339D,R346I,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.9         6087    215   3.5%   1 +[H69-,V70-,V213G,G339D,R346I,L452R,F486V,C1247F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.9         6087    157   2.6%   1 +[H69-,V70-,V213G,G339D,R346I,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.9         6087    115   1.9%   1 +[H69-,V70-,V213G,S256L,G339D,R346I,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.9         6087     72   1.2%   1 +[H69-,V70-,V213G,G339D,R346I,L452R,N460H,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BN.1.2         6049   4193  69.3%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
BN.1.2         6049    138   2.3%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.2         6049     82   1.4%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,R408S,V445P,F486P] 
BN.1.2         6049     54   0.9%   1 +[H49Y,K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.2         6049     50   0.8%   1 +[L5F,K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 

BA.5.2.12      6034   4138  68.6%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.12      6034    897  14.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.12      6034     71   1.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,E1202A]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.12      6034     44   0.7%   1 +[A67V,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.12      6034     41   0.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,Q677H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.177.12     5934   4159  70.1%   0 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.12     5934   1099  18.5%   1 +[A222V,K1073T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.12     5934    184   3.1%   1 +[L5F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.12     5934    105   1.8%   1 +[A222V,S640F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.12     5934     28   0.5%   1 +[G181V,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.37        5918   5052  85.4%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.37        5918    117   2.0%   1 +[V213G,V227L,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.37        5918     78   1.3%   1 +[V213G,G339D,L452M,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.37        5918     74   1.3%   1 +[V213G,G339D,Q493R,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.37        5918     64   1.1%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

BF.27          5878   4629  78.8%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.27          5878    123   2.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A688V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.27          5878    121   2.1%   2 +[H69-,V70-,H146-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.27          5878     56   1.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.27          5878     50   0.9%   1 +[H69-,V70-,F157L,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.2.3       5870   4267  72.7%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.3       5870    170   2.9%   1 +[H69-,V70-,G75A,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.3       5870     96   1.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.3       5870     70   1.2%   1 +[H69-,V70-,G75V,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.3       5870     67   1.1%   1 +[L5I,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.36         5813   2624  45.1%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.36         5813    349   6.0%   1 +[Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36         5813    173   3.0%   1 +[I210-]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36         5813    105   1.8%   1 +[Q23R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36         5813     98   1.7%   1 +[M1050I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.4.4         5771   4067  70.5%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.4.4         5771    601  10.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,N658S,A701V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.4         5771    137   2.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.4.4         5771     58   1.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.4         5771     42   0.7%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

Q.3            5754   3676  63.9%   0 +[H69-,V70-,D178H,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] (consensus)
Q.3            5754   1207  21.0%   1 +[H69-,V70-,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
Q.3            5754    149   2.6%   2 +[H69-,V70-,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
Q.3            5754     65   1.1%   2 +[H69-,V70-,M177I,D178H,A222V,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
Q.3            5754     30   0.5%   1 +[H69-,V70-,M177I,D178H,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

P.2            5733   3866  67.4%   0 +[E484K,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
P.2            5733    283   4.9%   1 +[E484K,F565L,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.2            5733     79   1.4%   1 +[L5F,E484K,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.2            5733     46   0.8%   1 +[E484K,T859I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.2            5733     32   0.6%   1 +[E484K,P809S,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.1.16        5651   3423  60.6%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.16        5651   1259  22.3%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F,V1264M]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.16        5651     77   1.4%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,D627G,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.16        5651     76   1.3%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.16        5651     41   0.7%   2 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,H625R,N856K,L981F,V1264M]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

XBB.1.16.1     5631   3773  67.0%   0 +[E180V,T478R,T547I]-[T478K] (consensus)
XBB.1.16.1     5631    109   1.9%   1 +[H146K,E180V,T478R,T547I]-[H146Q,T478K] 
XBB.1.16.1     5631     65   1.2%   1 +[E180V,T478R,T547I,E554K]-[T478K] 
XBB.1.16.1     5631     64   1.1%   1 +[E180V,T478R,P521S,T547I]-[T478K] 
XBB.1.16.1     5631     51   0.9%   1 +[E180V,T478R,T547I]-[K417N,T478K] 

BA.1.1.13      5585   4744  84.9%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.1.13      5585    172   3.1%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.13      5585     60   1.1%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.13      5585     44   0.8%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212-,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.13      5585     28   0.5%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,K417T,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 

BF.7.14        5538   4170  75.3%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,C1243F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.7.14        5538     65   1.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,S691F,C1243F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.14        5538     50   0.9%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V,C1243F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.14        5538     33   0.6%   1 +[H69-,V70-,V213G,G339D,S366A,L452R,F486V,C1243F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.14        5538     28   0.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,E1202Q,C1243F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

Q.1            5392   4080  75.7%   0 +[H69-,V70-,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] (consensus)
Q.1            5392    186   3.4%   1 +[H69-,V70-,A570D,T632S,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
Q.1            5392    100   1.9%   1 +[H69-,V70-,A570D,T716I,T732I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
Q.1            5392     81   1.5%   2 +[H69-,V70-,V367A,E484K,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
Q.1            5392     52   1.0%   1 +[L18F,H69-,V70-,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

AY.74          5360   3978  74.2%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.74          5360    224   4.2%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,H1101Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.74          5360    172   3.2%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.74          5360     74   1.4%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.74          5360     56   1.0%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,A688V,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.124         5339   1975  37.0%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.124         5339   1157  21.7%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.124         5339    139   2.6%   2 +[L8V,T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.124         5339     83   1.6%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,A688V,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.124         5339     83   1.6%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.10        5326   2772  52.0%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.10        5326   1179  22.1%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.10        5326     94   1.8%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,S939F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.10        5326     92   1.7%   1 +[L5F,H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.10        5326     37   0.7%   1 +[H69-,V70-,K147I,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

BA.2.10.1      5251   3985  75.9%   0 +[V213G,G339D,Q493R,G798D]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.10.1      5251    174   3.3%   2 +[T19L,V159I,V213G,G339D,Q493R,G798D]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.10.1      5251     99   1.9%   1 +[V213G,G339D,Q493R,G798D]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.10.1      5251     95   1.8%   1 +[V213G,G339D,Q493R,Q677H,G798D]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.10.1      5251     58   1.1%   1 +[L5F,V213G,G339D,Q493R,G798D]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.7.1         5232   3077  58.8%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.7.1         5232    661  12.6%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,A688V,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.7.1         5232    635  12.1%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.7.1         5232     52   1.0%   2 +[T19R,E156G,F157-,R158-,A263V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.7.1         5232     50   1.0%   2 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.525        5186   3105  59.9%   0 +[Q52R,A67V,H69-,V70-,E484K,Q677H,F888L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.525        5186    188   3.6%   1 +[Q52R,A67V,H69-,V70-,E484K,Q677H,D839Y,F888L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.525        5186     91   1.8%   1 +[Q52R,A67V,H69-,V70-,K150N,E484K,Q677H,F888L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.525        5186     73   1.4%   1 +[A67V,H69-,V70-,E484K,Q677H,F888L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.525        5186     68   1.3%   1 +[Q52R,A67V,H69-,V70-,G181A,E484K,Q677H,F888L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.43.6        5150   4616  89.6%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.43.6        5150     69   1.3%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,R1091H]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.6        5150     36   0.7%   1 +[T19R,D80Y,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.6        5150     28   0.5%   1 +[T19R,E156G,F157-,R158-,T274I,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.6        5150     26   0.5%   1 +[T19R,E156G,F157-,R158-,L452R,Y660F,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.12        5124   4123  80.5%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.12        5124     98   1.9%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.12        5124     42   0.8%   1 +[H69-,V70-,V213G,S254F,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.12        5124     40   0.8%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S,N679K] 
BQ.1.12        5124     21   0.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,I584V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

BQ.1.1.3       5066   2943  58.1%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.3       5066    584  11.5%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.3       5066    220   4.3%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,A688V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.3       5066     89   1.8%   1 +[H69-,V70-,H146-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.3       5066     85   1.7%   1 +[L5F,H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BA.1.14        5039   3930  78.0%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.14        5039    123   2.4%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.14        5039     94   1.9%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,N440K,V445P,N460K,F486P,F490S] 
BA.1.14        5039     63   1.3%   5 +[A67V,H69-,V70-,T95I,V143-,Y145-,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.14        5039     55   1.1%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 

B              5028   4062  80.8%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B              5028    129   2.6%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B              5028     37   0.7%   1 +[H49Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B              5028     22   0.4%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B              5028     17   0.3%   1 +[S247R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

P.1.17         5000   3660  73.2%   0 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
P.1.17         5000    160   3.2%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,D936Y,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.17         5000     95   1.9%   1 +[L18F,T20N,P26S,D138Y,R190S,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.17         5000     66   1.3%   1 +[L18F,T20N,P26S,G75V,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.17         5000     61   1.2%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F,E1258D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.1.24      4993   4057  81.3%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.24      4993     82   1.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A570V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.24      4993     78   1.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.24      4993     42   0.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.24      4993     40   0.8%   1 +[H69-,V70-,G181V,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.3.1       4992   2993  60.0%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.3.1       4992    188   3.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.3.1       4992    158   3.2%   3 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BA.5.3.1       4992    153   3.1%   2 +[A67V,H69-,V70-,V213G,G339D,L452R,F486V,A829T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.3.1       4992    101   2.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A829T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.369        4964   1968  39.6%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.369        4964    608  12.2%   1 +[E780Q]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.369        4964    310   6.2%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.369        4964    266   5.4%   1 +[H49Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.369        4964    155   3.1%   1 +[A688V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.177.60     4955   3171  64.0%   0 +[L18F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.60     4955    180   3.6%   1 +[L5F,L18F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.60     4955    173   3.5%   1 +[L18F,A222V,R1091H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.60     4955    124   2.5%   2 +[L18F,A222V,K558N,V687I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.60     4955     76   1.5%   1 +[L18F,A222V,I1232V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.240        4926   2583  52.4%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.240        4926    615  12.5%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.240        4926    275   5.6%   1 +[P809S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.240        4926    158   3.2%   1 +[L54F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.240        4926    101   2.1%   1 +[A575S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.2.6        4851   3339  68.8%   0 +[D253G,F486S]-[G252V,F486P] (consensus)
XBB.2.6        4851    279   5.8%   1 +[D253G,F486S]-[G252V,R408S,F486P] 
XBB.2.6        4851     81   1.7%   1 +[H146K,D253G,F486S]-[H146Q,G252V,F486P] 
XBB.2.6        4851     70   1.4%   1 +[D253G,F486S]-[Q183E,G252V,F486P] 
XBB.2.6        4851     51   1.1%   1 +[N148T,D253G,F486S]-[G252V,F486P] 

B.1.177.86     4768   2791  58.5%   0 +[L18F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.86     4768    604  12.7%   1 +[L18F,A222V,D1163Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.86     4768    211   4.4%   2 +[L18F,A222V,T547I,D1163Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.86     4768    146   3.1%   1 +[L18F,A222V,Q779K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.86     4768    119   2.5%   1 +[L18F,A222V,A1070S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

CH.1.1.1       4707   3432  72.9%   0 +[K147E,W152R,F157L,N185D,I210V,V213G,G257S,K444T,L452R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
CH.1.1.1       4707     55   1.2%   1 +[K147E,W152R,F157L,N185D,I210V,V213G,G257S,K444T,L452R,F486S,T883I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1.1       4707     51   1.1%   1 +[K147E,W152R,F157L,N185D,F186L,I210V,V213G,G257S,K444T,L452R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1.1       4707     33   0.7%   1 +[K147E,W152R,F157L,N185D,I210V,V213G,G257S,K444T,L452R,F486S,Q675K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1.1       4707     32   0.7%   1 +[K147E,W152R,F157L,N185D,I210V,V213G,G257S,K444T,L452R,F486S,Q613H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

AY.39.1.1      4666   3538  75.8%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.39.1.1      4666    377   8.1%   1 +[T19R,T95I,E156G,F157-,R158-,G219D,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.39.1.1      4666    172   3.7%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,R765H,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.39.1.1      4666    113   2.4%   1 +[T19R,R21T,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.39.1.1      4666     85   1.8%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,N481K,P681R,R765H,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.14          4633   3400  73.4%   0 +[H69-,V70-,V213G,G339D,N450D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.14          4633     95   2.1%   1 +[H69-,V70-,V213G,G339D,N450D,L452R,F486V,D1118Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.14          4633     59   1.3%   1 +[H69-,V70-,V213G,G339D,N450D,L452R,F486V,I742V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.14          4633     53   1.1%   1 +[H69-,V70-,V213G,G339D,N450D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.14          4633     47   1.0%   1 +[H69-,V70-,V213G,G339D,N450D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.2.12        4619   3802  82.3%   0 +[V213G,G339D,Q493R,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.12        4619     74   1.6%   1 +[G75V,V213G,G339D,Q493R,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.12        4619     68   1.5%   1 +[V213G,G339D,Q493R,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.12        4619     58   1.3%   1 +[L5F,V213G,G339D,Q493R,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.12        4619     34   0.7%   1 +[V213G,G339D,Q493R,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

BR.2.1         4612   3714  80.5%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,L452R,F486I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
BR.2.1         4612     34   0.7%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,L452R,F486I,N556K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BR.2.1         4612     33   0.7%   1 +[L5F,K147E,W152R,F157L,I210V,V213G,G257S,L452R,F486I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BR.2.1         4612     31   0.7%   1 +[K147E,W152R,F157L,I210V,L212S,V213G,G257S,L452R,F486I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BR.2.1         4612     26   0.6%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,L452R,F486I,Q1208H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

FU.1           4576   3418  74.7%   0 +[E180V,T478R,T547I]-[T478K] (consensus)
FU.1           4576    127   2.8%   1 +[E180V,T478R,T547I,N703Y]-[T478K] 
FU.1           4576     55   1.2%   1 +[H146K,E180V,T478R,T547I]-[H146Q,T478K] 
FU.1           4576     39   0.9%   1 +[E180V,T478R,T547I]-[Y144-,T478K] 
FU.1           4576     30   0.7%   1 +[E180V,T478R,T547I,K1266R]-[T478K] 

BQ.1.14        4545   3298  72.6%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.14        4545    139   3.1%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.14        4545     78   1.7%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E1258D]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.14        4545     49   1.1%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,F486P,F490S] 
BQ.1.14        4545     42   0.9%   1 +[H69-,V70-,K147N,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

B.1.1.222      4527   1872  41.4%   0 +[T732A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.222      4527    225   5.0%   2 +[T732A,A1078S,V1228I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.222      4527    166   3.7%   1 +[G257S,T732A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.222      4527    160   3.5%   1 +[T732A,A1078S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.222      4527    140   3.1%   2 +[T732A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

AY.34.1        4483   1846  41.2%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R,D950N,L1265F]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.34.1        4483    594  13.3%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R,D950N,V1133I,L1265F]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.34.1        4483    488  10.9%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R,D950N,L1265F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.34.1        4483    218   4.9%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R,D950N,V1264A,L1265F]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.34.1        4483     86   1.9%   1 +[T19R,T95I,E156G,F157-,R158-,P174S,L452R,Q677H,P681R,D950N,L1265F]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.29.1        4453   3604  80.9%   0 +[T19R,T95I,E156G,F157-,R158-,Q173H,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.29.1        4453    151   3.4%   1 +[T19R,T95I,E156G,F157-,R158-,Q173H,L452R,P681R,D950N,M1237I]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.29.1        4453     93   2.1%   1 +[T19R,T95I,E156G,F157-,R158-,Q173H,L452R,T553I,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.29.1        4453     86   1.9%   1 +[T19R,T95I,E156G,F157-,R158-,Q173H,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.29.1        4453     47   1.1%   1 +[T19R,T95I,E156G,F157-,R158-,Q173H,L176F,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.8           4406   3424  77.7%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.8           4406    100   2.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,P1162S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.8           4406     58   1.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.8           4406     54   1.2%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.8           4406     35   0.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A701V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

EG.1           4388   2464  56.2%   0 +[Q613H] (consensus)
EG.1           4388    311   7.1%   1 +[Q613H,G1124V] 
EG.1           4388     69   1.6%   1 +[H146K,Q613H]-[H146Q] 
EG.1           4388     60   1.4%   1 +[L452R,Q613H] 
EG.1           4388     44   1.0%   2 +[T29I,Q613H,A706V] 

B.1.177.81     4329   3075  71.0%   0 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.81     4329    112   2.6%   1 +[A222V,T240I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.81     4329    111   2.6%   1 +[L5F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.81     4329     78   1.8%   1 +[A222V,D839Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.81     4329     52   1.2%   1 +[A222V,V227L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.7.4         4320   3334  77.2%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.7.4         4320     70   1.6%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.4         4320     65   1.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T827I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.4         4320     48   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.7.4         4320     30   0.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,P1263L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

DY.2           4305   3315  77.0%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
DY.2           4305     40   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,D1163V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
DY.2           4305     35   0.8%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
DY.2           4305     33   0.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
DY.2           4305     20   0.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,P1162L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

XBB.1.9.2      4270   2100  49.2%   0  (consensus)
XBB.1.9.2      4270    183   4.3%   2 +[Q52H,F456L] 
XBB.1.9.2      4270    101   2.4%   1 +[H146K]-[H146Q] 
XBB.1.9.2      4270     80   1.9%   1 +[I794T] 
XBB.1.9.2      4270     71   1.7%   2 +[V70A,C1247S] 

BE.1.1.2       4251   3514  82.7%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BE.1.1.2       4251     93   2.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BE.1.1.2       4251     50   1.2%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.1.1.2       4251     36   0.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S,P681H] 
BE.1.1.2       4251     35   0.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

BQ.1.8         4211   3117  74.0%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.8         4211     80   1.9%   1 +[L5F,H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.8         4211     68   1.6%   1 +[H69-,V70-,F157L,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.8         4211     56   1.3%   1 +[H69-,V70-,V213G,D215Y,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.8         4211     53   1.3%   2 +[L5F,H69-,V70-,V213G,G339D,K444T,L452R,F486V,S940F]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

B.1.1.37       4210   2700  64.1%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.37       4210    324   7.7%   1 +[V622F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.37       4210    252   6.0%   4 +[L5F,A222V,D574Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.37       4210    216   5.1%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.37       4210     58   1.4%   1 +[P330S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.177.7      4196   3271  78.0%   0 +[L18F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.7      4196    215   5.1%   1 +[L18F,A222V,Q613H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.7      4196    151   3.6%   1 +[L18F,N185S,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.7      4196    103   2.5%   1 +[L18F,A222V,S256L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.7      4196     60   1.4%   1 +[L18F,A67S,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.5         4182   2093  50.0%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.5         4182    589  14.1%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.5         4182    149   3.6%   1 +[H69-,V70-,S98F,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.5         4182    120   2.9%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.5         4182     73   1.7%   1 +[H69-,V70-,H146-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

FL.4           4169   2712  65.1%   0  (consensus)
FL.4           4169     85   2.0%   1 +[H146K]-[H146Q] 
FL.4           4169     61   1.5%   1 +[R1014K] 
FL.4           4169     50   1.2%   1 -[K417N] 
FL.4           4169     35   0.8%   2 -[R408S,S477N] 

AY.4.2.3       4166   1671  40.1%   0 +[T19R,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4.2.3       4166   1006  24.1%   1 +[T19R,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,D950N,L1049I]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.2.3       4166    256   6.1%   1 +[T19R,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.2.3       4166    161   3.9%   2 +[T19R,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,D950N,L1049I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.2.3       4166     42   1.0%   1 +[T19R,T95I,Y145H,E156G,F157-,R158-,A222V,L452R,P681R,P812L,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.7.5         4163   2539  61.0%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.7.5         4163    684  16.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.5         4163     51   1.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A845S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.5         4163     43   1.0%   2 +[V6I,H69-,V70-,V213G,G339D,L452R,F486V,T547I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.5         4163     38   0.9%   5 +[H69-,V70-,V213G,G339D,L452R,F486V]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

XBB.1.16.11    4104   2722  66.3%   0 +[E180V,T478R,P521T]-[T478K] (consensus)
XBB.1.16.11    4104    127   3.1%   1 +[G72E,E180V,T478R,P521T]-[T478K] 
XBB.1.16.11    4104     78   1.9%   1 +[E180V,S256L,T478R,P521T]-[T478K] 
XBB.1.16.11    4104     53   1.3%   1 +[R78K,E180V,T478R,P521T]-[T478K] 
XBB.1.16.11    4104     50   1.2%   1 +[E180V,F186L,T478R,P521T]-[T478K] 

BQ.1.11        4072   2567  63.0%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.11        4072    322   7.9%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.11        4072    288   7.1%   1 +[H69-,V70-,W152L,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.11        4072    117   2.9%   1 +[H69-,V70-,H146-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.11        4072     46   1.1%   1 +[H69-,V70-,K147E,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

XBB.2.3        4049   1822  45.0%   0 +[D253G,P521S]-[G252V] (consensus)
XBB.2.3        4049    155   3.8%   1 +[G184V,D253G,P521S]-[G252V] 
XBB.2.3        4049    120   3.0%   1 +[I210-,D253G,P521S]-[G252V] 
XBB.2.3        4049     97   2.4%   1 +[D253G,S256T,P521S]-[G252V] 
XBB.2.3        4049     59   1.5%   1 +[H146K,D253G,P521S]-[H146Q,G252V] 

BQ.1.1.5       4034   2559  63.4%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.5       4034    390   9.7%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.5       4034     57   1.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.5       4034     34   0.8%   1 +[H69-,V70-,H146-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.5       4034     32   0.8%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,Q613H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BF.7.15        4015   3291  82.0%   0 +[H69-,V70-,V213G,G257D,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.7.15        4015     99   2.5%   1 +[L8F,H69-,V70-,V213G,G257D,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.15        4015     59   1.5%   1 +[H69-,V70-,V213G,G257D,G339D,L452R,F486V,L752F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.15        4015     48   1.2%   1 +[H69-,V70-,V213G,G257D,G339D,L452R,F486V,S1252F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.15        4015     43   1.1%   1 +[L5F,H69-,V70-,V213G,G257D,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.46.4        3978   2310  58.1%   0 +[T19R,E156G,F157-,R158-,L452R,E661D,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.46.4        3978    597  15.0%   1 +[T19R,E156G,F157-,R158-,L452R,E661D,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46.4        3978    299   7.5%   1 +[T19R,E156G,F157-,R158-,A222S,L452R,E661D,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46.4        3978    116   2.9%   2 +[T19R,E156G,F157-,R158-,A222S,L452R,E661D,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46.4        3978     26   0.7%   1 +[L5F,T19R,E156G,F157-,R158-,L452R,E661D,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.23        3972   3013  75.9%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.23        3972     49   1.2%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,A688V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.23        3972     35   0.9%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,A1078S]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.23        3972     34   0.9%   1 +[H69-,V70-,V213G,Q271K,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.23        3972     25   0.6%   1 +[L5F,H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

XBB.1.5.13     3908   2775  71.0%   0  (consensus)
XBB.1.5.13     3908     55   1.4%   1 -[K417N] 
XBB.1.5.13     3908     50   1.3%   1 +[H146K]-[H146Q] 
XBB.1.5.13     3908     34   0.9%   1 +[P1162L] 
XBB.1.5.13     3908     23   0.6%   2 -[R408S,S477N] 

B.1.177.4      3905   3376  86.5%   0 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.4      3905     77   2.0%   1 +[A222V,D253G]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.4      3905     37   0.9%   1 +[L5F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.4      3905     18   0.5%   1 +[A222V,P1263T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.4      3905     14   0.4%   1 +[S12F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AD.2           3848   3335  86.7%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AD.2           3848     93   2.4%   1 +[S71P]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AD.2           3848     44   1.1%   1 +[S255F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AD.2           3848     21   0.5%   1 +[L938F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AD.2           3848     21   0.5%   1 +[A626V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

P.1.7          3833   2318  60.5%   0 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,N764K,D796Y,Q954H,N969K] (consensus)
P.1.7          3833    132   3.4%   1 +[L18F,T20N,P26S,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,N764K,D796Y,Q954H,N969K] 
P.1.7          3833     70   1.8%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,E780A,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,N764K,D796Y,Q954H,N969K] 
P.1.7          3833     61   1.6%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,Q613H,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,N764K,D796Y,Q954H,N969K] 
P.1.7          3833     60   1.6%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,E654Q,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,N764K,D796Y,Q954H,N969K] 

BA.1.21        3813   3202  84.0%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.21        3813    117   3.1%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.21        3813     39   1.0%   4 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214GAR,D215N,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.21        3813     30   0.8%   5 +[A67V,H69-,V70-,T95I,V143-,Y145-,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.21        3813     29   0.8%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 

B.1.1.28       3802   2029  53.4%   0 +[V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.28       3802    156   4.1%   2 +[M153T,S689I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.28       3802     64   1.7%   3 +[M153T,N658T,S689I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.28       3802     58   1.5%   2 +[A222V,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.28       3802     46   1.2%   6 +[G142V,N164K,Q173K,L452R,S704L,I720V,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.4.2         3789   3040  80.2%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.4.2         3789    103   2.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.4.2         3789     40   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.4.2         3789     39   1.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,V1164I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.2         3789     24   0.6%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.1.25      3744   2624  70.1%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.25      3744    155   4.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.25      3744    132   3.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.25      3744     93   2.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.25      3744     51   1.4%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.2.34      3742   2512  67.1%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.34      3742    126   3.4%   1 +[H69-,V70-,V213G,D215E,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.34      3742    118   3.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.34      3742     53   1.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A688V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.34      3742     52   1.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

BA.5.2.28      3741   2481  66.3%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.28      3741    113   3.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.28      3741     77   2.1%   1 +[H69-,V70-,V213G,G339D,S359N,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.28      3741     55   1.5%   1 +[H69-,V70-,G184S,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.28      3741     47   1.3%   2 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.8         3728   2915  78.2%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,P1162L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.8         3728    143   3.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,P1162L,Q1201H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.8         3728     76   2.0%   1 +[H69-,V70-,W152R,V213G,G339D,L452R,F486V,P1162L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.8         3728     34   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,P1162L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.8         3728     34   0.9%   1 +[R21T,H69-,V70-,V213G,G339D,L452R,F486V,P1162L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.2.13        3724   2234  60.0%   0 +[V213G,G339D,L452M,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.13        3724    898  24.1%   1 +[V213G,G339D,L452M,Q493R,D936Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.13        3724     70   1.9%   2 +[V213G,S255F,G339D,L452M,Q493R,D936Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.13        3724     43   1.2%   1 +[L5F,V213G,G339D,L452M,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.13        3724     35   0.9%   1 +[V213G,G339D,L452M,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

AY.122.5       3682   1779  48.3%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.122.5       3682   1034  28.1%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122.5       3682    124   3.4%   1 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122.5       3682    117   3.2%   2 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122.5       3682     85   2.3%   2 +[T19R,E156G,F157-,R158-,S255F,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BD.1           3681   3175  86.3%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,Q628K,A701V,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BD.1           3681     47   1.3%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,S371L,Q493R,G496S,T547K,Q628K,A701V,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BD.1           3681     42   1.1%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,Q628K,A701V,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BD.1           3681     39   1.1%   1 +[A67V,H69-,V70-,T95I,I105L,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,Q628K,A701V,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BD.1           3681     32   0.9%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,Q628K,A701V,N856K,L981F,E1202Q]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

AY.4.8         3665   3027  82.6%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4.8         3665     94   2.6%   1 +[T19R,T95I,E156G,F157-,R158-,G181R,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.8         3665     34   0.9%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,A647S,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.8         3665     32   0.9%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,T961M]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.8         3665     31   0.8%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,A1020V]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.2.22      3661   2781  76.0%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.22      3661     68   1.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.22      3661     60   1.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,Q677H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.22      3661     51   1.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.22      3661     45   1.2%   1 +[H69-,V70-,V213G,T250A,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.112         3602   1358  37.7%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.112         3602    583  16.2%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.112         3602    134   3.7%   1 +[T19R,T95I,E156G,F157-,R158-,S254F,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.112         3602     60   1.7%   2 +[T19R,T95I,E156G,F157-,R158-,S254F,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.112         3602     51   1.4%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,E1207D]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.2.26      3600   2406  66.8%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.26      3600    128   3.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.26      3600    122   3.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.26      3600     55   1.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.26      3600     43   1.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

AY.43.8        3572   1979  55.4%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.43.8        3572    415  11.6%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.8        3572    166   4.6%   1 +[L18F,T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.8        3572    132   3.7%   1 +[T19R,E156G,F157-,R158-,R214L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.8        3572     42   1.2%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,L822I,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

DY.4           3549   2779  78.3%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
DY.4           3549     75   2.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
DY.4           3549     30   0.8%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
DY.4           3549     29   0.8%   1 +[Q14H,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
DY.4           3549     19   0.5%   1 +[H69-,V70-,V213G,T307I,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

A.1            3545   3113  87.8%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
A.1            3545     54   1.5%   1 +[V483A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
A.1            3545     29   0.8%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
A.1            3545     25   0.7%   1 +[L18F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
A.1            3545     17   0.5%   1 +[A623V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.25.3        3542   2303  65.0%   0 +[T19R,E156G,F157-,R158-,S221L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.25.3        3542    664  18.7%   1 +[T19R,E156G,F157-,R158-,L176F,S221L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.25.3        3542    146   4.1%   1 +[T19R,E156G,F157-,R158-,S221L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.25.3        3542     45   1.3%   1 +[L5F,T19R,E156G,F157-,R158-,S221L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.25.3        3542     24   0.7%   1 +[T19R,E156G,F157-,R158-,S221L,L452R,P681R,S704L,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.13          3513   1969  56.0%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.13          3513    415  11.8%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.13          3513    306   8.7%   1 +[T19R,E156G,F157-,R158-,I210-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.13          3513     81   2.3%   2 +[T19R,E156G,F157-,R158-,I210-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.13          3513     48   1.4%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,S940F,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.114         3508   1959  55.8%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.114         3508    625  17.8%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.114         3508     46   1.3%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.114         3508     37   1.1%   2 +[S12F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.114         3508     30   0.9%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,S640F,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BN.1           3454   2234  64.7%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
BN.1           3454    169   4.9%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,T961M]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1           3454     39   1.1%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,R408S,V445P,F486P] 
BN.1           3454     38   1.1%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,S929T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1           3454     27   0.8%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,E1111Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 

AY.93          3437   2729  79.4%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.93          3437     62   1.8%   1 +[T19R,E156G,F157-,R158-,G446V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.93          3437     60   1.7%   1 +[T19R,E156G,F157-,R158-,L452R,T547I,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.93          3437     36   1.0%   2 +[T19R,E156G,F157-,R158-,L452R,P681R,I818V,D950N,G1219C]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.93          3437     29   0.8%   1 +[T19R,E156G,F157-,R158-,L452R,A623S,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.595        3366   2261  67.2%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.595        3366    117   3.5%   1 +[A1087G]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.595        3366    109   3.2%   1 +[D178G]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.595        3366     53   1.6%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.595        3366     50   1.5%   1 +[A845S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.1.1       3343   1943  58.1%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.1       3343    187   5.6%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.1       3343     67   2.0%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,A688T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.1       3343     55   1.6%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E1144Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.1       3343     51   1.5%   1 +[H69-,V70-,V213G,G339D,K444T,V445A,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

B.1.497        3316   2697  81.3%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.497        3316     77   2.3%   2 +[Q52H,N556K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.497        3316     50   1.5%   1 +[I1169F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.497        3316     50   1.5%   1 +[A684T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.497        3316     26   0.8%   1 +[T20N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.4.6.5       3303   2665  80.7%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.4.6.5       3303     38   1.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.4.6.5       3303     33   1.0%   1 +[W64L,H69-,V70-,V213G,G339D,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.6.5       3303     29   0.9%   1 +[H69-,V70-,V213G,T250I,G339D,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.6.5       3303     25   0.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,N658S,Q675H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

EG.5.1.4       3301   2241  67.9%   0 +[Q52H,F456L] (consensus)
EG.5.1.4       3301    174   5.3%   1 +[Q52H,L455F,F456L] 
EG.5.1.4       3301    102   3.1%   1 +[Q52H,H146K,F456L]-[H146Q] 
EG.5.1.4       3301     41   1.2%   1 +[Q52H,F456L,V483I] 
EG.5.1.4       3301     40   1.2%   1 +[Q52H,F456L,E654K] 

AY.85          3299    998  30.3%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.85          3299    798  24.2%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.85          3299    135   4.1%   2 +[T19R,T95I,E156G,F157-,R158-,F306L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.85          3299     99   3.0%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,S698A,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.85          3299     41   1.2%   1 +[T19R,T95I,E156G,F157-,R158-,G219D,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

GJ.1.2         3278   2081  63.5%   0 +[K182N,D253G,P521S]-[G252V] (consensus)
GJ.1.2         3278    107   3.3%   1 +[H146K,K182N,D253G,P521S]-[H146Q,G252V] 
GJ.1.2         3278     58   1.8%   1 +[K182N,D253G,T478R,P521S]-[G252V,T478K] 
GJ.1.2         3278     46   1.4%   1 +[K150I,K182N,D253G,P521S]-[G252V] 
GJ.1.2         3278     30   0.9%   1 +[K182N,D253G,P521S]-[G252V,K417N] 

BA.2.75.2      3258   2096  64.3%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,F486S,D1199N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
BA.2.75.2      3258     45   1.4%   4 +[K147E,W152R,F157L,I210V,V213G,G257S,F486S,D1199N]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BA.2.75.2      3258     36   1.1%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,F486S,D1199N]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BA.2.75.2      3258     35   1.1%   1 +[K147E,W152R,F157L,I210V,G257S,F486S,D1199N]-[V83A,Y144-,H146Q,Q183E,G252V,L368I,V445P,F486P,F490S] 
BA.2.75.2      3258     32   1.0%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,F486S,L1186I,D1199N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

BA.2.38        3240   1705  52.6%   0 +[V213G,G339D,K417T,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.38        3240    215   6.6%   1 +[V213G,G339D,K417T,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.38        3240    121   3.7%   1 +[V213G,G339D,K417T,Q493R]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,N460K,F486P,F490S] 
BA.2.38        3240    101   3.1%   4 +[V213G,G339D,K417T,Q493R]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,N460K,F486P,F490S] 
BA.2.38        3240     99   3.1%   1 +[V213G,G339D,K417T,K444N,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,N460K,F486P,F490S] 

AY.7           3215   2528  78.6%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.7           3215     91   2.8%   1 +[T19R,E156G,F157-,R158-,Y265C,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.7           3215     78   2.4%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,T747I,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.7           3215     57   1.8%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.7           3215     45   1.4%   2 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,L1224S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,Q954H,N969K] 

BF.4           3207   2460  76.7%   0 +[H69-,V70-,V213G,T259A,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.4           3207     70   2.2%   1 +[H69-,V70-,V213G,T259A,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.4           3207     61   1.9%   2 +[T19L,H69-,V70-,V213G,T259A,G339D,L452R,F486V,D1153N]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.4           3207     42   1.3%   1 +[H69-,V70-,V213G,T259A,G339D,L452R,F486V,P1162L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.4           3207     37   1.2%   1 +[H69-,V70-,V213G,T259A,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

BA.2.3.20      3202   2002  62.5%   0 +[M153T,N164K,V213G,H245N,G257D,G339D,K444R,N450D,L452M,E484R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,E484A,F486P,F490S] (consensus)
BA.2.3.20      3202     44   1.4%   1 +[M153T,N164K,V213G,H245N,G257D,G339D,K444R,N450D,L452M,T478E,E484R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,T478K,E484A,F486P,F490S] 
BA.2.3.20      3202     38   1.2%   1 +[M153T,N164K,M177I,V213G,H245N,G257D,G339D,K444R,N450D,L452M,E484R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,E484A,F486P,F490S] 
BA.2.3.20      3202     36   1.1%   1 +[M153T,N164K,H245N,G257D,G339D,K444R,N450D,L452M,E484R]-[V83A,Y144-,H146Q,Q183E,G252V,G339H,R346T,L368I,V445P,G446S,E484A,F486P,F490S] 
BA.2.3.20      3202     33   1.0%   1 +[M153T,N164K,V213G,H245N,Y248H,G257D,G339D,K444R,N450D,L452M,E484R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,E484A,F486P,F490S] 

BA.2.65        3201   2298  71.8%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.65        3201    213   6.7%   1 +[V213G,G339N,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.65        3201     71   2.2%   1 +[V213G,G339D,Q493R,E1195G]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.65        3201     60   1.9%   1 +[V213G,S255F,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.65        3201     46   1.4%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

BQ.1.3.2       3184   2337  73.4%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E619Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.3.2       3184    121   3.8%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E619Q,V1133A]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.3.2       3184     52   1.6%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E619Q]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.3.2       3184     42   1.3%   1 +[H69-,V70-,W152R,V213G,G339D,K444T,L452R,F486V,E619Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.3.2       3184     20   0.6%   2 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E619Q,A701V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

P.1.15         3178   2208  69.5%   0 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
P.1.15         3178    124   3.9%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,G1085E,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.15         3178     35   1.1%   1 +[L18F,T20N,P26S,D138Y,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.15         3178     28   0.9%   1 +[L5F,L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.15         3178     23   0.7%   2 +[L18F,T20N,P25S,P26S,D138Y,R190S,K417T,E484K,T1027I,G1085E,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.1.33       3173   2128  67.1%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.33       3173     57   1.8%   1 +[Q23K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.33       3173     32   1.0%   1 +[Q675H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.33       3173     23   0.7%   1 +[V1104L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.33       3173     22   0.7%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.101         3107   1175  37.8%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.101         3107    758  24.4%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.101         3107    160   5.1%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.101         3107     79   2.5%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.101         3107     38   1.2%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.1.7       3089   2128  68.9%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.7       3089    197   6.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.7       3089     43   1.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,V1230M]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.7       3089     25   0.8%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,T1077A]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.7       3089     22   0.7%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,F643L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

XBB.1.5.7      3079   2176  70.7%   0  (consensus)
XBB.1.5.7      3079     50   1.6%   1 -[K417N] 
XBB.1.5.7      3079     46   1.5%   1 +[H146K]-[H146Q] 
XBB.1.5.7      3079     31   1.0%   2 -[R408S,S477N] 
XBB.1.5.7      3079     29   0.9%   2 +[H146K,D936H]-[H146Q] 

BA.1.1.12      3076   2698  87.7%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.1.12      3076     59   1.9%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,S704L,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.12      3076     52   1.7%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,T299I,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.12      3076     34   1.1%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,P272L,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.12      3076     21   0.7%   1 +[L54F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

BA.5.1.6       3058   1892  61.9%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.6       3058    178   5.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.6       3058    160   5.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.6       3058    120   3.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T547K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.6       3058     56   1.8%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

XBB.1.5.15     3040   1952  64.2%   0  (consensus)
XBB.1.5.15     3040    114   3.8%   2 +[N185D,F456L] 
XBB.1.5.15     3040     61   2.0%   1 +[H146K]-[H146Q] 
XBB.1.5.15     3040     46   1.5%   1 -[K417N] 
XBB.1.5.15     3040     39   1.3%   1 +[G181V] 

BA.5.2.2       2996   2083  69.5%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.2       2996    184   6.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,G1219C]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.2       2996    114   3.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.2       2996     35   1.2%   1 +[H69-,V70-,V213G,G339D,R346I,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.2       2996     24   0.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

GK.1.1         2972   1946  65.5%   0 +[L455F,F456L,T573I,S704L] (consensus)
GK.1.1         2972     49   1.6%   1 +[L5F,L455F,F456L,T573I,S704L] 
GK.1.1         2972     43   1.4%   1 +[H146K,L455F,F456L,T573I,S704L]-[H146Q] 
GK.1.1         2972     33   1.1%   1 +[L455F,F456L,T573I,S704L,G946V] 
GK.1.1         2972     32   1.1%   1 +[A262P,L455F,F456L,T573I,S704L] 

B.1.311        2951   1133  38.4%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.311        2951    475  16.1%   1 +[G72R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.311        2951    309  10.5%   1 +[A845S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.311        2951    202   6.8%   1 +[S12F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.311        2951    119   4.0%   2 +[D88H,K1073N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.1.1.16      2944   2624  89.1%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.1.16      2944     17   0.6%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.16      2944     16   0.5%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 
BA.1.1.16      2944     16   0.5%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.16      2944     14   0.5%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,L452M,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

AY.70          2888   1800  62.3%   0 +[T19R,R21T,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.70          2888    602  20.8%   1 +[T19R,R21T,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.70          2888     25   0.9%   2 +[T19R,R21T,E156G,F157-,R158-,A222V,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.70          2888     22   0.8%   1 +[T19R,R21T,E156G,F157-,R158-,A222V,L452R,P681R,D950N,T1117I]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.70          2888     22   0.8%   2 +[T19R,R21T,E156G,F157-,R158-,A222V,L452R,P681R,D950N,D1153Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

HF.1           2875   2099  73.0%   0 +[E180V,K304N,T478R]-[T478K] (consensus)
HF.1           2875     62   2.2%   1 +[H146K,E180V,K304N,T478R]-[H146Q,T478K] 
HF.1           2875     36   1.3%   1 +[G75V,E180V,K304N,T478R]-[T478K] 
HF.1           2875     34   1.2%   2 +[E180V,K304N,T478R,D1084N,H1101Y]-[T478K] 
HF.1           2875     22   0.8%   1 +[L5F,E180V,K304N,T478R]-[T478K] 

P.1.10         2855   2143  75.1%   0 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
P.1.10         2855    225   7.9%   1 +[L18F,T20N,P26S,D138Y,Q183H,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.10         2855     41   1.4%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,N606K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.10         2855     32   1.1%   1 +[L18F,T20N,P26S,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.10         2855     24   0.8%   1 +[L18F,T20N,P26S,D138Y,R190S,T323I,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.1.70       2840   1230  43.3%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.70       2840    698  24.6%   1 +[Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.70       2840     71   2.5%   2 +[H69-,V70-]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.70       2840     68   2.4%   1 +[A1078V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.70       2840     45   1.6%   2 +[L5F,Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.30          2838   1018  35.9%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.30          2838    838  29.5%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.30          2838    178   6.3%   4 +[T19R,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.30          2838     34   1.2%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,T1117I]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.30          2838     28   1.0%   3 +[T19R,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.2.48      2817   2254  80.0%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.48      2817     32   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A570S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.48      2817     15   0.5%   1 +[H69-,V70-,V213G,L277F,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.48      2817     10   0.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.48      2817      9   0.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

BQ.1.18        2805   2127  75.8%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.18        2805     46   1.6%   1 +[H69-,V70-,V213G,H245Y,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.18        2805     45   1.6%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,K417N,V445P,G446S,F486P,F490S] 
BQ.1.18        2805     40   1.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,S939F]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.18        2805     26   0.9%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,R408S,V445P,G446S,F486P,F490S] 

B.1.177.57     2805   2060  73.4%   0 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.57     2805    297  10.6%   2 +[P26S,A222V,A688V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.57     2805     67   2.4%   1 +[A222V,A688V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.57     2805     22   0.8%   1 +[A222V,A575S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.57     2805     20   0.7%   1 +[L5F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.2.27      2799   1670  59.7%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.27      2799    290  10.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.27      2799     46   1.6%   1 +[H69-,V70-,K147I,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.27      2799     39   1.4%   1 +[H69-,V70-,K97T,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.27      2799     36   1.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,D936G]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.575        2798   1998  71.4%   0 +[S494P,T716I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] (consensus)
B.1.575        2798    155   5.5%   1 +[S494P,T716I,A1078S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.575        2798     49   1.8%   1 +[W152R,S494P,T716I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.575        2798     40   1.4%   2 +[S494P,T716I,S735L,A893S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.575        2798     36   1.3%   1 +[L5F,S494P,T716I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

AY.120.1       2796   1507  53.9%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.120.1       2796    477  17.1%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.120.1       2796     78   2.8%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,P1162L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.120.1       2796     39   1.4%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,P1162L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.120.1       2796     35   1.3%   1 +[T19R,L54F,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.1.13.1      2768   2423  87.5%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.13.1      2768     64   2.3%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F,Q1201K]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.13.1      2768     49   1.8%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 
BA.1.13.1      2768     28   1.0%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,N440K,V445P,N460K,F486P,F490S] 
BA.1.13.1      2768      8   0.3%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F,S1021F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

BA.5.5.1       2757   2209  80.1%   0 +[H69-,V70-,T76I,V213G,G339D,N450D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.5.1       2757     52   1.9%   1 +[H69-,V70-,T76I,V213G,G339D,N450D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.5.1       2757     33   1.2%   1 +[L5F,H69-,V70-,T76I,V213G,G339D,N450D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.5.1       2757     31   1.1%   1 +[H69-,V70-,T76I,V213G,G339D,N450D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.5.1       2757     22   0.8%   1 +[H69-,V70-,T76I,V213G,S255F,G339D,N450D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.1.318      2749   1856  67.5%   0 +[T95I,E484K,D796H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.318      2749    111   4.0%   1 +[T95I,E484K,D796H,Q1208H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.1.318      2749     60   2.2%   1 +[T95I,E484K,D796H,P1162S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.1.318      2749     40   1.5%   1 +[T95I,E484K,N501T,D796H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.1.318      2749     32   1.2%   2 +[T95I,E484K,D796H,A1078S,Q1208H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

BE.9           2745   2107  76.8%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BE.9           2745     57   2.1%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BE.9           2745     43   1.6%   1 +[H69-,V70-,F157L,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BE.9           2745     40   1.5%   1 +[H69-,V70-,F157S,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BE.9           2745     31   1.1%   1 +[H69-,V70-,V213G,S255F,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

BQ.1.1.69      2724   1830  67.2%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.69      2724    211   7.7%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.69      2724     46   1.7%   1 +[H69-,V70-,V213G,G252D,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.69      2724     33   1.2%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,T883I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.69      2724     26   1.0%   1 +[L5F,H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BA.2.9.3       2720   2100  77.2%   0 +[W64R,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.9.3       2720    153   5.6%   1 +[W64R,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.9.3       2720     47   1.7%   1 +[W64R,M153T,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.9.3       2720     24   0.9%   1 +[W64R,V213G,G339D,Q493R]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.9.3       2720     18   0.7%   2 +[W64R,V213G,G339D,Q493R]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

EG.6.1         2708   1801  66.5%   0 +[F456L] (consensus)
EG.6.1         2708     80   3.0%   1 +[F456L]-[R408S] 
EG.6.1         2708     57   2.1%   1 +[H146K,F456L]-[H146Q] 
EG.6.1         2708     51   1.9%   1 +[F456L,C1236F] 
EG.6.1         2708     29   1.1%   1 +[F456L,V705I] 

BA.2.76        2696   1955  72.5%   0 +[V213G,Y248N,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.76        2696    135   5.0%   1 +[V213G,Y248N,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.76        2696     52   1.9%   4 +[V213G,Y248N,G339D,Q493R]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.76        2696     38   1.4%   1 +[L5F,V213G,Y248N,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.76        2696     24   0.9%   1 +[V213G,Y248N,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

AY.110         2687   1533  57.1%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.110         2687    593  22.1%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.110         2687     44   1.6%   1 +[T19R,T95I,K97R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.110         2687     36   1.3%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.110         2687     31   1.2%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,A623V,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

JD.1.1         2679   1860  69.4%   0 +[L455F,F456L,A475V] (consensus)
JD.1.1         2679     39   1.5%   1 +[H146K,L455F,F456L,A475V]-[H146Q] 
JD.1.1         2679     26   1.0%   1 +[L455F,F456L,A475V]-[T19I] 
JD.1.1         2679     24   0.9%   1 +[L455F,F456L,A475V,T478R]-[T478K] 
JD.1.1         2679     24   0.9%   1 +[L455F,F456L,A475V,S1252P] 

BA.5.2.35      2671   1960  73.4%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.35      2671     57   2.1%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.35      2671     34   1.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.35      2671     30   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,N460K,F486P,F490S] 
BA.5.2.35      2671     25   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,H1101Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.2.7         2666   2213  83.0%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.7         2666     98   3.7%   1 +[L5F,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.7         2666     76   2.9%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.7         2666     24   0.9%   2 +[L5F,V213G,G339D,Q493R,I1130V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.7         2666     16   0.6%   1 +[V213G,G339D,Q493R,S939F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.39.1.4      2601   2272  87.4%   0 +[S12F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.39.1.4      2601     24   0.9%   1 +[S12F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.39.1.4      2601     22   0.8%   1 +[S12F,T19R,T95I,E156G,F157-,R158-,A222S,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.39.1.4      2601     19   0.7%   1 +[S12F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,N856K,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.39.1.4      2601     19   0.7%   1 +[S12F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,D936Y,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.116.1       2595   1460  56.3%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.116.1       2595    302  11.6%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.116.1       2595     81   3.1%   1 +[S12F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.116.1       2595     65   2.5%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,D1118Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.116.1       2595     51   2.0%   1 +[T19R,T95I,E156G,F157-,R158-,F306L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.4.3         2592    737  28.4%   0 +[T19R,P26S,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.3         2592    493  19.0%   1 +[T19R,P26S,L54F,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4.3         2592    359  13.9%   3 +[T19R,P26S,L54F,T95I,E156G,F157-,R158-,A262S,L452R,P681R,D950N,A1078S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.3         2592    146   5.6%   2 +[T19R,P26S,L54F,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.3         2592     99   3.8%   1 +[T19R,P26S,T95I,E156G,F157-,R158-,M177I,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.13        2581   1298  50.3%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.13        2581    650  25.2%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.13        2581     68   2.6%   1 +[H69-,V70-,G184S,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.13        2581     52   2.0%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,T618K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.13        2581     37   1.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,L1244F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

ED.1           2560   2229  87.1%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
ED.1           2560     43   1.7%   1 +[H69-,V70-,T208M,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
ED.1           2560     17   0.7%   1 +[H69-,V70-,V213G,L242F,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
ED.1           2560     13   0.5%   1 +[L5F,H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
ED.1           2560     12   0.5%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,T747I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BA.4.1.1       2558   1612  63.0%   0 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V,I670V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.4.1.1       2558    429  16.8%   1 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.1.1       2558     45   1.8%   4 +[H69-,V70-,V213G,G339D,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.1.1       2558     43   1.7%   1 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V,I670V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.4.1.1       2558     37   1.4%   1 +[V3G,H69-,V70-,G181V,V213G,G339D,L452R,F486V,I670V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

XBB.1.5.1      2552   1780  69.7%   0 +[T573I] (consensus)
XBB.1.5.1      2552     41   1.6%   1  
XBB.1.5.1      2552     35   1.4%   1 +[T573I]-[K417N] 
XBB.1.5.1      2552     34   1.3%   1 +[H146K,T573I]-[H146Q] 
XBB.1.5.1      2552     33   1.3%   1 +[T478R,T573I]-[T478K] 

AY.121.1       2548   1457  57.2%   0 +[T19R,T29I,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.121.1       2548    168   6.6%   1 +[T19R,T29I,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.121.1       2548    118   4.6%   1 +[V6F,T19R,T29I,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.121.1       2548    104   4.1%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.121.1       2548     42   1.6%   2 +[T19R,T29I,T95I,E156G,F157-,R158-,L452R,P681R,D950N,N1158D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.2.13      2534   1912  75.5%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.13      2534     49   1.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.13      2534     39   1.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,S1147L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.13      2534     29   1.1%   1 +[H69-,V70-,V213G,T250I,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.13      2534     27   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T791I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

BF.7.6         2531   1759  69.5%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.7.6         2531     40   1.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,S691P]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.6         2531     36   1.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.7.6         2531     34   1.3%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.6         2531     26   1.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,C1247F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

EG.5.1.6       2524   1813  71.8%   0 +[Q52H,F157L,F456L] (consensus)
EG.5.1.6       2524     84   3.3%   1 +[Q52H,F157L,N211I,F456L] 
EG.5.1.6       2524     53   2.1%   1 +[Q52H,F157L,L455F,F456L] 
EG.5.1.6       2524     30   1.2%   1 +[L5F,Q52H,F157L,F456L] 
EG.5.1.6       2524     29   1.1%   1 +[Q52H,H146K,F157L,F456L]-[H146Q] 

DV.6           2486   1840  74.0%   0 +[K147E,W152R,F157L,N185D,I210V,V213G,G257S,K444T,L452R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
DV.6           2486     77   3.1%   1 +[K147E,W152R,F157L,N185D,I210V,V213G,G257S,K444T,L452R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S,N764K] 
DV.6           2486     32   1.3%   1 +[K147E,W152R,F157L,N185D,I210V,V213G,G257S,K444T,L452R,F486S,I1216V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
DV.6           2486     29   1.2%   1 +[K147E,W152R,F157L,N185D,I210V,V213G,G257S,K444T,L452R,F486S,S673T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
DV.6           2486     26   1.0%   1 +[K147E,W152R,F157L,N185D,I210V,V213G,G257S,K444T,L452R,F486S,T678I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

BA.5.3         2483   1329  53.5%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.3         2483    258  10.4%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.3         2483    204   8.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,S1170F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.3         2483    111   4.5%   1 +[H69-,V70-,V213G,G261C,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.3         2483     76   3.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

AY.39.1.2      2481   1363  54.9%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.39.1.2      2481    472  19.0%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.39.1.2      2481     69   2.8%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q675H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.39.1.2      2481     57   2.3%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q613H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.39.1.2      2481     40   1.6%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,A522V,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.1.434      2475   1294  52.3%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.434      2475    555  22.4%   1 +[D1168G]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.434      2475     61   2.5%   1 +[D1084G]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.434      2475     46   1.9%   1 +[T95I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.434      2475     33   1.3%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.2.1       2474   1454  58.8%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.2.2.1       2474    887  35.9%  29 +[V213G,G339D,Q493R,I1221T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.2.1       2474     40   1.6%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.2.2.1       2474     22   0.9%  25 +[V213G,G339D,Q493R,I1221T]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.2.1       2474     11   0.4%  30 +[G75A,V213G,G339D,Q493R,I1221T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.107         2453   1375  56.1%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,H1101Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.107         2453    288  11.7%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,H1101Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.107         2453     57   2.3%   1 +[T19R,T95I,V143F,E156G,F157-,R158-,L452R,P681R,D950N,H1101Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.107         2453     57   2.3%   1 +[T19R,T95I,E156G,F157-,R158-,E180D,L452R,P681R,D950N,H1101Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.107         2453     50   2.0%   6 +[L452R,P681R,D950N,H1101Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5.49     2446   1406  57.5%   0  (consensus)
XBB.1.5.49     2446    102   4.2%   1 +[T478R]-[T478K] 
XBB.1.5.49     2446     68   2.8%   1 -[K417N] 
XBB.1.5.49     2446     53   2.2%   1 +[H146K]-[H146Q] 
XBB.1.5.49     2446     39   1.6%   1 +[T588I] 

BA.2.3.11      2436   2110  86.6%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.3.11      2436     31   1.3%   1 +[V213G,G339D,Q493R,A570V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.11      2436     20   0.8%   1 +[V90I,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.11      2436     19   0.8%   1 +[V213G,G339D,Q493R,V622A]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.11      2436     15   0.6%   1 +[V213G,G339D,Q493R,K1191N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BQ.1.2.3       2432   1686  69.3%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,I666V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.2.3       2432    138   5.7%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,I666V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.2.3       2432    126   5.2%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,E484V,F486V,I666V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,E484A,F486P,F490S] 
BQ.1.2.3       2432     70   2.9%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,I666V,I934V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.2.3       2432     27   1.1%   1 +[H69-,V70-,L118F,V213G,G339D,K444T,L452R,F486V,I666V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

BA.1.14.1      2410   1674  69.5%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.14.1      2410    167   6.9%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,N440K,V445P,N460K,F486P,F490S] 
BA.1.14.1      2410     53   2.2%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.14.1      2410     51   2.1%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 
BA.1.14.1      2410     36   1.5%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

BN.1.3.1       2392   1784  74.6%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
BN.1.3.1       2392     61   2.6%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,R408S,V445P,F486P] 
BN.1.3.1       2392     20   0.8%   1 +[K147E,W152R,F157L,G181A,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.3.1       2392     19   0.8%   1 +[L5F,K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.3.1       2392     17   0.7%   1 +[K147E,W152R,F157L,Q183H,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 

A              2390   1762  73.7%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
A              2390     82   3.4%   3 +[A222V,D253Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
A              2390     53   2.2%   1 +[T29I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
A              2390     38   1.6%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
A              2390     21   0.9%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

GE.1           2384   1343  56.3%   0 +[N185I,F186-,D253G,T478R,P521S]-[G252V,T478K] (consensus)
GE.1           2384     61   2.6%   1 +[M153I,N185I,F186-,D253G,T478R,P521S]-[G252V,T478K] 
GE.1           2384     41   1.7%   1 +[H146K,N185I,F186-,D253G,T478R,P521S]-[H146Q,G252V,T478K] 
GE.1           2384     37   1.6%   1 +[E96G,N185I,F186-,D253G,T478R,P521S]-[G252V,T478K] 
GE.1           2384     32   1.3%   1 +[L118I,N185I,F186-,D253G,T478R,P521S]-[G252V,T478K] 

AY.29.2        2384   2149  90.1%   0 +[T19R,T95I,E156G,F157-,R158-,Q414R,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.29.2        2384     45   1.9%   1 +[T19R,T95I,E156G,F157-,R158-,V308L,Q414R,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.29.2        2384     12   0.5%   1 +[T19R,T95I,E156G,F157-,R158-,Q414R,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.29.2        2384     10   0.4%   1 +[T19R,T95I,E156G,F157-,R158-,Q414R,L452R,P681R,D950N,Q954K]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.29.2        2384      8   0.3%   2 +[T19R,T95I,E156G,F157-,R158-,S254F,Q414R,L452R,P681R,D950N,Q1208H]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.466.2      2374   1356  57.1%   0 +[N439K,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.466.2      2374    245  10.3%   1 +[N439K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.466.2      2374     94   4.0%   1 +[W152R,N439K,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.466.2      2374     34   1.4%   1 +[L5F,N439K,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.466.2      2374     27   1.1%   1 +[N439K,P681R,V1104L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.5.4         2373    890  37.5%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.5.4         2373    395  16.6%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.5.4         2373    292  12.3%   1 +[T19R,D80Y,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.5.4         2373    177   7.5%   2 +[T19R,D80Y,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.5.4         2373     30   1.3%   3 +[T19R,D80Y,E156G,F157-,R158-,S162I,H245Y,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.15       2371   1533  64.7%   0 +[F486S]-[F486P] (consensus)
XBB.1.15       2371    176   7.4%   1 +[F486S]-[K417N,F486P] 
XBB.1.15       2371     65   2.7%   1 +[F486S,V1122L]-[F486P] 
XBB.1.15       2371     53   2.2%   1 +[F486S]-[G252V,F486P] 
XBB.1.15       2371     41   1.7%   1 +[H146K,F486S]-[H146Q,F486P] 

BN.1.5         2367   1915  80.9%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
BN.1.5         2367     19   0.8%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,R408S,V445P,F486P] 
BN.1.5         2367     12   0.5%   1 +[K147E,W152R,F157L,I210V,V213G,R214H,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.5         2367     11   0.5%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,P681R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,P681H] 
BN.1.5         2367     10   0.4%   2 +[K147E,W152R,F157L,I210V,V213G,K356T]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 

B.1.1.1        2352   1376  58.5%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.1        2352    208   8.8%   1 +[H146Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.1        2352     61   2.6%   1 +[T1117I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.1        2352     36   1.5%   2 +[I818V,T1117I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.1        2352     36   1.5%   1 +[A783S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.24          2349   1416  60.3%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.24          2349    315  13.4%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.24          2349     66   2.8%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,T859I,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.24          2349     63   2.7%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,H1101Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.24          2349     43   1.8%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,S680F,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.1.311      2346   1951  83.2%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.311      2346    104   4.4%   1 +[S477I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.311      2346     21   0.9%   1 +[Q957L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.311      2346     21   0.9%   1 +[N125S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.311      2346     11   0.5%   1 +[H245R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.1.176      2307   1761  76.3%   0 +[T20I,R357K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.176      2307    281  12.2%   2 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.176      2307     19   0.8%   1 +[L5F,T20I,R357K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.176      2307     18   0.8%   1 +[T20I,R357K,V1264M]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.176      2307     17   0.7%   1 +[T20I,R357K,V433I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.63          2301   1955  85.0%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.63          2301     74   3.2%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,K814R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.63          2301     27   1.2%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,A1078S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.63          2301     24   1.0%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,S704L,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.63          2301     19   0.8%   1 +[T19R,E156G,F157-,R158-,A222V,P337L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.11        2293   1716  74.8%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.11        2293    167   7.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A1016S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.11        2293     41   1.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.11        2293     37   1.6%   2 +[H69-,V70-,V213G,G339D,L452R,F486V,A1016S]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.11        2293     22   1.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,H625R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.59          2279   1145  50.2%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.59          2279    360  15.8%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.59          2279     69   3.0%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,Q613H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.59          2279     22   1.0%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,G932V,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.59          2279     15   0.7%   7 +[T19R,P85T,V90D,Y91D,F92S,S94T,E156G,F157-,R158-,A222V,L452R,P681R,D950N,E1182Q]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

DV.7.1         2274   1530  67.3%   0 +[K147E,W152R,F157L,N185D,I210V,V213G,G257S,K444T,L452R,L455F,F456L,F486S,L858I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
DV.7.1         2274     41   1.8%   1 +[K147E,W152R,F157L,N185D,I210V,V213G,G257S,K444T,L452R,L455F,F456L,F486S,L858I,D1184Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
DV.7.1         2274     40   1.8%   1 +[K147E,W152R,F157L,N185D,I210V,V213G,G257S,K444T,L452R,L455F,F456L,F486S,L858I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,R408S,V445P,F486P,F490S] 
DV.7.1         2274     36   1.6%   1 +[V90I,K147E,W152R,F157L,N185D,I210V,V213G,G257S,K444T,L452R,L455F,F456L,F486S,L858I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
DV.7.1         2274     36   1.6%   1 +[K147E,W152R,F157L,N185D,I210V,V213G,T240I,G257S,K444T,L452R,L455F,F456L,F486S,L858I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

AY.1           2255   1483  65.8%   0 +[T19R,T95I,E156G,F157-,R158-,W258L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.1           2255    141   6.3%   1 +[T19R,T95I,E156G,F157-,R158-,W258L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.1           2255     76   3.4%   1 +[V16A,T19R,T95I,E156G,F157-,R158-,W258L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.1           2255     40   1.8%   2 +[T19R,T95I,E156G,F157-,R158-,W258L,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.1           2255     30   1.3%   1 +[T19R,T95I,E156G,F157-,R158-,W258L,L452R,P681R,D950N,M1237I]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XE             2239   2039  91.1%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
XE             2239     57   2.5%   1 +[V213G,G339D,Q493R,S939F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
XE             2239     17   0.8%   1 +[V213G,H245N,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
XE             2239     17   0.8%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
XE             2239      6   0.3%   1 +[L5F,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.4.9         2238   1352  60.4%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4.9         2238    312  13.9%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.9         2238     57   2.5%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.9         2238     54   2.4%   3 +[T19R,T95I,E156G,F157-,R158-,A352S,L452R,Q677H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.9         2238     29   1.3%   2 +[T19R,T95I,E156G,F157-,R158-,A352S,L452R,Q677H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.617.1      2228   1361  61.1%   0 +[T95I,E154K,L452R,E484Q,P681R,Q1071H]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.617.1      2228     95   4.3%   1 +[T95I,L452R,E484Q,P681R,Q1071H]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.617.1      2228     54   2.4%   1 +[T95I,E154K,L452R,E484Q,P681R,Q1071H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.617.1      2228     41   1.8%   2 +[E154K,L452R,E484Q,P681R,Q1071H,H1101D]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.617.1      2228     41   1.8%   2 +[T95I,E154K,L452R,E484Q,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.36.18      2227   1612  72.4%   0 +[G75R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.36.18      2227     60   2.7%   1 +[G75R,A684V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.18      2227     58   2.6%   1 +[G75R,S640F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.18      2227     58   2.6%   1 +[G75R,P1162S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.18      2227     58   2.6%   1 +[G75R,Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5.17     2223   1477  66.4%   0  (consensus)
XBB.1.5.17     2223     80   3.6%   1 +[H146K]-[H146Q] 
XBB.1.5.17     2223     27   1.2%   2 +[S256L,F490P]-[F490S] 
XBB.1.5.17     2223     25   1.1%   1 +[N556K] 
XBB.1.5.17     2223     22   1.0%   1 -[K417N] 

BQ.1.1.32      2222   1570  70.7%   0 +[H69-,V70-,M153I,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.32      2222     90   4.1%   1 +[H69-,V70-,M153I,V213G,G339D,K444T,L452R,F486V,T1120S]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.32      2222     47   2.1%   1 +[H69-,V70-,M153I,V213G,T323I,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.32      2222     35   1.6%   1 +[H69-,V70-,M153I,V213G,A260T,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.32      2222     26   1.2%   1 +[H69-,V70-,M153I,V213G,G339D,K444T,L452R,F486V,T883I]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BQ.1.1.10      2214   1744  78.8%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.10      2214     39   1.8%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,K417N,V445P,G446S,F486P,F490S] 
BQ.1.1.10      2214     30   1.4%   1 +[H69-,V70-,V213G,D253G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.10      2214     24   1.1%   1 +[L5F,H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.10      2214     24   1.1%   1 +[H69-,V70-,V213G,Q271E,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

FL.2           2200   1398  63.5%   0  (consensus)
FL.2           2200     51   2.3%   3 +[L141-,G142-,V143-]-[G142D] 
FL.2           2200     36   1.6%   1 +[T478R]-[T478K] 
FL.2           2200     30   1.4%   1 +[S256P] 
FL.2           2200     26   1.2%   1 -[K417N] 

BF.13          2199   1702  77.4%   0 +[H69-,V70-,V213G,G339D,R346S,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.13          2199     52   2.4%   2 +[L5F,H69-,V70-,V213G,G339D,R346S,L452R,F486V,A688V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.13          2199     36   1.6%   1 +[H69-,V70-,V213G,G339D,R346S,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.13          2199     32   1.5%   1 +[H69-,V70-,V213G,G339D,R346S,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.13          2199     23   1.0%   1 +[H69-,V70-,V213G,A222S,G339D,R346S,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BQ.1.1.15      2191   1166  53.2%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.15      2191    295  13.5%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.15      2191     48   2.2%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,A701V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.15      2191     45   2.1%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,L938F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.15      2191     26   1.2%   1 +[H69-,V70-,E180G,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BQ.1.1.20      2190   1597  72.9%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.20      2190    362  16.5%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,A1070V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.20      2190     15   0.7%   1 +[H69-,V70-,V213G,L216F,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.20      2190     12   0.5%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,G1124V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.20      2190     10   0.5%   1 +[L5F,H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

P.1.1          2188    682  31.2%   0 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
P.1.1          2188    475  21.7%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,N764K,D796Y,Q954H,N969K] 
P.1.1          2188    358  16.4%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,S813N,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.1          2188     60   2.7%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,S640F,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.1          2188     56   2.6%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,E583D,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 

JG.3           2176   1153  53.0%   0 +[Q52H,L455F,F456L,S704L] (consensus)
JG.3           2176    199   9.1%   1 +[Q52H,T307I,L455F,F456L,S704L] 
JG.3           2176    116   5.3%   1 +[Q52H,N450D,L455F,F456L,S704L] 
JG.3           2176     33   1.5%   1 +[Q52H,L455F,F456L,S704L]-[T19I] 
JG.3           2176     30   1.4%   1 +[Q52H,H146K,L455F,F456L,S704L]-[H146Q] 

B.1.1.529      2131    191   9.0%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H] 
B.1.1.529      2131     41   1.9%   2 +[A67V,H69-,V70-,T95I,V143-,Y145-,L452R,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H] 
B.1.1.529      2131     30   1.4%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,G339D,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H] 
B.1.1.529      2131     29   1.4%   7 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H] 
B.1.1.529      2131     28   1.3%  10 +[T19R,A67V,H69-,V70-,T95I,V143-,Y145-,E156G,F157-,R158-,E554Q,N856K]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,N764K,D796Y,N969K] 

BQ.1.13.1      2131   1614  75.7%   0 +[H69-,V70-,F157L,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.13.1      2131     34   1.6%   1 +[H69-,V70-,F157L,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.13.1      2131     32   1.5%   1 +[L5F,H69-,V70-,F157L,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.13.1      2131     26   1.2%   1 +[H69-,V70-,F157L,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,F486P,F490S] 
BQ.1.13.1      2131     19   0.9%   1 +[H69-,V70-,F157L,V213G,G339D,K444T,L452R,F486V,E780G]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

DY.1           2130   1577  74.0%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,A570S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
DY.1           2130     42   2.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A570S,N1125S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
DY.1           2130     24   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A570S,V1228L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
DY.1           2130     24   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A570S,E1258D]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
DY.1           2130     18   0.8%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V,A570S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.57          2123   1584  74.6%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.57          2123     37   1.7%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.57          2123     37   1.7%   1 +[T19R,S98F,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.57          2123     29   1.4%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,P1079S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.57          2123     25   1.2%   1 +[T19R,T95I,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BE.4           2122   1609  75.8%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BE.4           2122     49   2.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BE.4           2122     39   1.8%   2 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BE.4           2122     35   1.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.4           2122     24   1.1%   2 +[H69-,V70-,V213G,G339D,N450D,L452R,F486V,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BF.7.20        2114   1477  69.9%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.7.20        2114    135   6.4%   1 +[H69-,V70-,V213G,T259I,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.20        2114    126   6.0%   1 +[A67S,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.20        2114     51   2.4%   2 +[H69-,V70-,K147N,V213G,S247N,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.20        2114     19   0.9%   1 +[H69-,V70-,W152L,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.1.1.10      2110   1859  88.1%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.1.10      2110     40   1.9%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F,Q1201K]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.10      2110     20   0.9%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.10      2110     19   0.9%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.10      2110      9   0.4%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F,E1202Q]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

B.1.177.82     2106   1728  82.1%   0 +[A222V,A262S,P272L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.82     2106     44   2.1%   1 +[A222V,P272L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.82     2106     30   1.4%   1 +[T95N,A222V,A262S,P272L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.82     2106     26   1.2%   1 +[L18F,A222V,A262S,P272L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.82     2106     20   0.9%   1 +[A222V,A262S,P272L,S939F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BE.1.4         2103   1572  74.8%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BE.1.4         2103     47   2.2%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.1.4         2103     38   1.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BE.1.4         2103     36   1.7%   1 +[H69-,V70-,G184S,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.1.4         2103     26   1.2%   1 +[Q52H,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.582        2098   1469  70.0%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.582        2098    144   6.9%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.582        2098     45   2.1%   2 +[L5F,P1162S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.582        2098     43   2.0%   1 +[V1164F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.582        2098     27   1.3%   1 +[D138H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.5.4         2098   1645  78.4%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.5.4         2098     75   3.6%   2 +[H69-,V70-,V213G,G339D,L452R,F486V,T572S,A1020S,C1235F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.5.4         2098     51   2.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,G946R,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.5.4         2098     36   1.7%   1 +[H69-,V70-,V213G,T299I,G339D,L452R,F486V,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.5.4         2098     18   0.9%   1 +[H69-,V70-,L176F,V213G,G339D,L452R,F486V,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.2.9.5       2096   1616  77.1%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.9.5       2096     81   3.9%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.9.5       2096     70   3.3%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.9.5       2096     16   0.8%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S,N764K] 
BA.2.9.5       2096     14   0.7%   1 +[L5F,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.37          2082    767  36.8%   0 +[T19R,E156G,F157-,R158-,A222V,V367L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.37          2082    333  16.0%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.37          2082    235  11.3%   1 +[T19R,E156G,F157-,R158-,A222V,V367L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.37          2082    164   7.9%   2 +[T19R,E156G,F157-,R158-,A222V,L452R,Y508H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.37          2082     79   3.8%   3 +[T19R,E156G,F157-,R158-,A222V,L452R,Y508H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.1.27      2081   1406  67.6%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.27      2081    189   9.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,V687I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.27      2081     67   3.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,E1202Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.27      2081     23   1.1%   4 +[H69-,V70-,V213G,G339D,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,R408S,K417N,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.27      2081     19   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,D1184Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.122.2       2080   1140  54.8%   0 +[T19R,E156G,F157-,R158-,A411S,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.122.2       2080    282  13.6%   2 +[T19R,E156G,F157-,R158-,A411S,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122.2       2080    247  11.9%   1 +[T19R,E156G,F157-,R158-,A411S,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122.2       2080     30   1.4%   1 +[T19R,E156G,F157-,R158-,A411S,L452R,Q613H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122.2       2080     25   1.2%   1 +[T19R,E156G,F157-,R158-,A411S,L452R,P681R,D950N,T1117I]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.10.2      2079   1746  84.0%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.10.2      2079    132   6.3%  31 +[R34L,A123S,V213G,R214L,G339D,A344S,+370F,A372P,S373F,T376-,A411S,V433F,G476C,Q493L,Q498L,R577L,R634L,R646L,A672S,R682L,R683L,R685L,R765L,G857C,R983L,R1091L,R1185L,D1199Y,D1260Y]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,N440K,V445P,G446S,N460K,F486P,F490S,Q498R] 
BA.2.10.2      2079     32   1.5%   1 +[F157L,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.10.2      2079     25   1.2%   1 +[V213G,G339D,Q493R,S929N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.10.2      2079     22   1.1%   1 +[V213G,G339D,Q493R,L752F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.258.11     2076    981  47.3%   0 +[H69-,V70-,V143F,N439K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.258.11     2076    593  28.6%   1 +[H69-,V70-,N439K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.258.11     2076    131   6.3%   2 +[H69-,V70-,G261R,N439K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.258.11     2076     90   4.3%   1 +[H69-,V70-,V143F,N439K,G1085A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.258.11     2076     52   2.5%   1 +[H69-,V70-,V143F,N439K,S673G]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.560        2074    778  37.5%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.560        2074    330  15.9%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,P681H,N764K,D796Y,Q954H,N969K] 
B.1.560        2074     88   4.2%   2 +[F157L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.560        2074     40   1.9%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.560        2074     32   1.5%   1 +[Q218H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.177.45     2071   1997  96.4%   0 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.45     2071     10   0.5%   1 +[L5F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.45     2071      5   0.2%   1 +[G75V,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.45     2071      5   0.2%   1 +[V83F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.45     2071      4   0.2%   1 +[D80Y,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.1.23      2050    773  37.7%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.23      2050    741  36.1%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.23      2050     75   3.7%   1 +[H69-,V70-,F157L,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.23      2050     24   1.2%   2 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,P1162S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.23      2050     17   0.8%   1 +[L5F,H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

AY.4.7         2042   1459  71.4%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4.7         2042    242  11.9%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.7         2042     27   1.3%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,E1202Q]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.7         2042     23   1.1%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,E1202Q]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.7         2042     16   0.8%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.400        2041    976  47.8%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.400        2041    258  12.6%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.400        2041    178   8.7%   1 +[G769V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.400        2041    138   6.8%   1 +[H49Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.400        2041     85   4.2%   1 +[A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.3.7       2008    988  49.2%   0 +[K97E,V213G,G339D,Q493R,G1251V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.3.7       2008    467  23.3%   1 +[K97E,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.7       2008    180   9.0%   1 +[K97E,V213G,G339D,Q493R,G1251V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.7       2008     71   3.5%   2 +[K97E,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.7       2008     61   3.0%   1 +[K97E,V213G,G339D,Q493R,G1251V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

BA.2.40.1      1997   1520  76.1%   0 +[V213G,G339D,K417T,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.40.1      1997    102   5.1%   1 +[M177V,V213G,G339D,K417T,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,N460K,F486P,F490S] 
BA.2.40.1      1997     40   2.0%   1 +[V213G,G339D,K417T,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.40.1      1997     23   1.2%   1 +[V213G,G339D,K417T,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,K417N,V445P,G446S,N460K,F486P,F490S] 
BA.2.40.1      1997     22   1.1%   1 +[V213G,G339D,K417T,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,K417N,V445P,G446S,N460K,F486P,F490S] 

AY.23.1        1991   1714  86.1%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,L1234I,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.23.1        1991     45   2.3%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,V1230L,L1234I,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.23.1        1991     26   1.3%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,E1188D,L1234I,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.23.1        1991     13   0.7%   3 +[T19R,L452R,P681R,D950N,L1234I,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.23.1        1991      9   0.5%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,A694V,D950N,L1234I,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.92          1983   1056  53.3%   0 +[T19R,T95I,E156G,F157-,R158-,D178N,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.92          1983    206  10.4%   1 +[T19R,T95I,E156G,F157-,R158-,D178N,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.92          1983    155   7.8%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.92          1983     59   3.0%   1 +[T19R,T95I,E156G,F157-,R158-,D178N,L242F,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.92          1983     38   1.9%   1 +[T19R,T95I,E156G,F157-,R158-,D178N,L452R,P681R,D950N,P1162S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AE.8           1966   1715  87.2%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AE.8           1966     16   0.8%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AE.8           1966     14   0.7%   1 +[I1216L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AE.8           1966     13   0.7%   1 +[P809S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AE.8           1966     11   0.6%   1 +[V736I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.36.36      1949   1207  61.9%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.36.36      1949    506  26.0%   1 +[P26S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.36      1949     33   1.7%   1 +[P1162S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.36      1949     22   1.1%   1 +[T95I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.36      1949     21   1.1%   2 +[P26S,Q1201K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.1.7       1930   1621  84.0%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.7       1930     47   2.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T747I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.7       1930     34   1.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.7       1930     17   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,H1101Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.7       1930     10   0.5%   1 +[S12F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.2.48        1927   1673  86.8%   0 +[V213G,Y248S,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.48        1927     63   3.3%   1 +[V213G,Y248S,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.48        1927     18   0.9%   1 +[V213G,Y248S,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.2.48        1927      7   0.4%   2 +[V83F,V213G,Y248S,G339D,Q493R]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.48        1927      6   0.3%   1 +[V213G,Y248S,G339D,Q493R,G1171S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.1.317      1922    687  35.7%   0 +[D138Y,A522S,Q675R,A845S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.317      1922    378  19.7%   5 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.317      1922     83   4.3%   1 +[D138Y,Q675R,A845S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.317      1922     57   3.0%   3 +[A522S,Q675R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.317      1922     57   3.0%   1 +[D138Y,A222V,A522S,Q675R,A845S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.2           1919   1495  77.9%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.2           1919     53   2.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.2           1919     31   1.6%   1 +[H69-,V70-,V213G,G339D,R346S,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.2           1919     23   1.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.2           1919     22   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,V1122L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.517        1911    922  48.2%   0 +[N501T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.517        1911    322  16.8%   1 +[N501T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.517        1911    160   8.4%   2 +[N501T,Q613H,S640F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.517        1911     93   4.9%   1 +[N501T,V1133A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.517        1911     52   2.7%   1 +[N501T,Q613H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.79          1908   1063  55.7%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.79          1908    209  11.0%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.79          1908     25   1.3%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,P812S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.79          1908     21   1.1%   1 +[T19R,E156G,F157-,R158-,G181V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.79          1908     19   1.0%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.6         1899   1466  77.2%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.6         1899     77   4.1%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.6         1899     63   3.3%   1 +[V213G,G339D,Q493R,E1202Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.6         1899     48   2.5%   1 +[I210V,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.6         1899     30   1.6%   1 +[V213G,G339D,Q493R,D1259H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

XBB.1.16.15    1897   1387  73.1%   0 +[K147N,E180V,T478R,P521S]-[T478K] (consensus)
XBB.1.16.15    1897     74   3.9%   1 +[K147N,E180V,T478R,P521S,T732I]-[T478K] 
XBB.1.16.15    1897     25   1.3%   1 +[K147N,E180V,T478R,P521S,V1228L]-[T478K] 
XBB.1.16.15    1897     20   1.1%   1 +[K147N,E180V,T478R,P521S,S704L]-[T478K] 
XBB.1.16.15    1897     17   0.9%   1 +[K147N,E180V,T478R]-[T478K] 

CL.1           1893   1123  59.3%   0 +[H69-,V70-,K150E,V213G,G339D,K444N,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
CL.1           1893     62   3.3%   5 +[H69-,V70-,K150E,V213G,G339D,K444N,L452R,F486V]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
CL.1           1893     47   2.5%   1 +[H69-,V70-,K150E,V213G,G339D,K444N,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,F486P,F490S] 
CL.1           1893     47   2.5%   1 +[H69-,V70-,K150E,V213G,G339D,K444N,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S,N764K] 
CL.1           1893     35   1.8%   2 +[H69-,V70-,K150E,V213G,G339D,K444N,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S,N764K,D796Y] 

EF.1           1889   1306  69.1%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
EF.1           1889     77   4.1%   1 +[H69-,V70-,E132Q,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
EF.1           1889     45   2.4%   1 +[H69-,V70-,F157L,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
EF.1           1889     30   1.6%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,K417N,V445P,G446S,F486P,F490S] 
EF.1           1889     15   0.8%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,Q836L]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

B.1.561        1887   1188  63.0%   0 +[D138Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.561        1887    412  21.8%   1 +[D138Y,S939F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.561        1887     18   1.0%   3 +[D138Y,S939F,V1230A,T1238I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.561        1887     16   0.8%   2 +[D138Y,D178E,S939F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.561        1887     11   0.6%   1 +[D138Y,V1122L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.1.18      1872   1456  77.8%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.18      1872     46   2.5%   1 +[H69-,V70-,G75V,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.18      1872     30   1.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.18      1872     17   0.9%   1 +[H69-,V70-,V159I,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.18      1872     17   0.9%   1 +[T19L,H69-,V70-,V213G,G339D,L452R,F486V]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

P.1.16         1870   1441  77.1%   0 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
P.1.16         1870     38   2.0%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E471Q,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.16         1870     29   1.6%   1 +[L18F,T20N,P26S,D138Y,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.16         1870     22   1.2%   1 +[L5F,L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.16         1870     21   1.1%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,K528I,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.1.2       1866    964  51.7%   0 +[H69-,V70-,V213G,D253G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.2       1866    450  24.1%   1 +[H69-,V70-,V213G,D253G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.2       1866     41   2.2%   2 +[H69-,V70-,N99D,V213G,D253G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.2       1866     35   1.9%   1 +[H69-,V70-,H146-,V213G,D253G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.2       1866     25   1.3%   2 +[H69-,V70-,V213G,D253G,G339D,K444T,L452R,F486V,D1260H]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BQ.1.25        1851   1098  59.3%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.25        1851     97   5.2%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.25        1851     89   4.8%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.25        1851     51   2.8%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,T791A]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.25        1851     49   2.6%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,T747I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BA.5.2.19      1847   1234  66.8%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.19      1847     95   5.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,H1083Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.19      1847     83   4.5%   4 +[H69-,V70-,L179F,G339D,N450D,L452R,F486V,F1075L]-[V83A,Y144-,H146Q,Q183E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.19      1847     44   2.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,C1247F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.19      1847     34   1.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,D1127A]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

FL.5           1843   1109  60.2%   0  (consensus)
FL.5           1843     35   1.9%   1 +[T478R]-[T478K] 
FL.5           1843     32   1.7%   1 +[H146K]-[H146Q] 
FL.5           1843     28   1.5%   1 +[I651V] 
FL.5           1843     17   0.9%   1 -[R408S] 

AY.41          1833    742  40.5%   0 +[T19R,E156G,F157-,R158-,A262S,L452R,S477I,P681R,D950N,G1167V]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.41          1833    509  27.8%   1 +[T19R,E156G,F157-,R158-,A262S,L452R,S477I,P681R,D950N,G1167V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.41          1833     32   1.7%   1 +[T19R,E156G,F157-,R158-,A262S,L452R,S477I,Q613H,P681R,D950N,G1167V]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.41          1833     25   1.4%   2 +[T19R,E156G,F157-,R158-,A262S,L452R,S477I,Q613H,P681R,D950N,G1167V,K1191N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.41          1833     25   1.4%   1 +[T19R,E156G,F157-,R158-,A262S,L452R,S477I,T678I,P681R,D950N,G1167V]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.1.307      1819   1269  69.8%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.307      1819    335  18.4%   1 +[G261V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.307      1819     28   1.5%   1 +[A1020S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.307      1819     17   0.9%   1 +[C1235F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.307      1819     17   0.9%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5.32     1814   1100  60.6%   0  (consensus)
XBB.1.5.32     1814    236  13.0%   1 +[T883I] 
XBB.1.5.32     1814     38   2.1%   1 +[D796H]-[D796Y] 
XBB.1.5.32     1814     21   1.2%   6 -[R408S,K417N,N440K,V445P,G446S,N460K] 
XBB.1.5.32     1814     19   1.0%   1 +[L335F] 

XAZ            1812   1318  72.7%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
XAZ            1812     63   3.5%   1 +[H69-,V70-,P82L,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
XAZ            1812     44   2.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
XAZ            1812     37   2.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
XAZ            1812     30   1.7%   1 +[H69-,V70-,V213G,G339D,R346I,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

JN.1           1810   1275  70.4%   0 +[+16MPLF,R21T,S50L,H69-,V70-,V127F,F157S,R158G,N211-,L212I,V213G,L216F,H245N,A264D,I332V,K356T,R403K,V445H,N450D,L452W,L455S,N481K,V483-,E484K,E554K,A570V,P621S,P681R,S939F,P1143L]-[V83A,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,E484A,F490S,P681H] (consensus)
JN.1           1810    112   6.2%   4 +[R21T,S50L,H69-,V70-,V127F,F157S,R158G,N211-,L212I,V213G,L216F,H245N,A264D,I332V,K356T,R403K,V445H,N450D,L452W,L455S,N481K,V483-,E484K,E554K,A570V,P621S,P681R,S939F,P1143L]-[V83A,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,E484A,F490S,P681H] 
JN.1           1810     34   1.9%   1 +[+16MPLF,R21T,S50L,H69-,V70-,V127F,F157S,R158G,N211-,L212I,V213G,L216F,H245N,A264D,I332V,K356T,R403K,V445H,N450D,L452W,L455S,N481K,V483-,E484K,E554K,A570V,P621S,P681R,S939F,P1143L,M1229I]-[V83A,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,E484A,F490S,P681H] 
JN.1           1810     21   1.2%   1 +[+16MPLF,R21T,S50L,H69-,V70-,V127F,F157S,R158G,N211-,L212I,V213G,L216F,H245N,A264D,I332V,K356T,R403K,V445H,N450D,L452W,L455S,N481K,V483-,E484K,E554K,A570V,T572I,P621S,P681R,S939F,P1143L]-[V83A,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,E484A,F490S,P681H] 
JN.1           1810     14   0.8%   1 +[+16MPLF,R21T,S50L,H69-,V70-,V127F,F157S,R158G,N211-,L212I,V213G,L216F,H245N,A264D,I332V,K356T,V445H,N450D,L452W,L455S,N481K,V483-,E484K,E554K,A570V,P621S,P681R,S939F,P1143L]-[V83A,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,E484A,F490S,P681H] 

BQ.1.3.1       1809   1062  58.7%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E619Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.3.1       1809    136   7.5%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E619Q,I934V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.3.1       1809     58   3.2%   1 +[H69-,V70-,V213G,P251L,G339D,K444T,L452R,F486V,E619Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.3.1       1809     45   2.5%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E619Q]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.3.1       1809     40   2.2%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E619Q,P621S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

XBB.1.5.37     1808   1129  62.4%   0 +[K1045R] (consensus)
XBB.1.5.37     1808     66   3.7%   1 +[F456L,K1045R] 
XBB.1.5.37     1808     45   2.5%   1 +[K1045R]-[K417N] 
XBB.1.5.37     1808     28   1.5%   1 +[H146K,K1045R]-[H146Q] 
XBB.1.5.37     1808     20   1.1%   2 +[K1045R]-[R408S,S477N] 

B.1.1.25       1803   1005  55.7%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.25       1803    193  10.7%   1 +[P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.25       1803    126   7.0%   1 +[Q675H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.25       1803     15   0.8%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.25       1803     14   0.8%   1 +[V6I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

DY.3           1799   1469  81.7%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
DY.3           1799     20   1.1%   1 +[H69-,V70-,V213G,G339D,G446D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
DY.3           1799      9   0.5%   1 +[H69-,V70-,V83F,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
DY.3           1799      8   0.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
DY.3           1799      8   0.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,F1121L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BQ.1.1.45      1793   1217  67.9%   0 +[H69-,V70-,V213G,Y248D,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.45      1793     34   1.9%   1 +[H69-,V70-,V213G,Y248D,G339D,K444T,L452R,F486V,P1162S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.45      1793     24   1.3%   1 +[H69-,V70-,V213G,Y248D,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,R408S,V445P,G446S,F486P,F490S] 
BQ.1.1.45      1793     18   1.0%   1 +[H69-,V70-,V213G,Y248D,G339D,K444T,G446V,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.45      1793     17   0.9%   1 +[H69-,V70-,V213G,Y248D,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,S371F,V445P,G446S,F486P,F490S] 

AY.34.1.1      1784    857  48.0%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R,D950N,L1265F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.34.1.1      1784    197  11.0%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R,D950N,L1265F]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.34.1.1      1784    106   5.9%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.34.1.1      1784     68   3.8%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R,L1265F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.34.1.1      1784     32   1.8%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R,D950N,A1078S,L1265F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

DN.2           1781   1397  78.4%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
DN.2           1781     56   3.1%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,Q675H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
DN.2           1781     53   3.0%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
DN.2           1781     21   1.2%   1 +[H69-,V70-,F186L,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
DN.2           1781     15   0.8%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F456L,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BA.5.3.3       1781   1526  85.7%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.3.3       1781     19   1.1%   1 +[H69-,V70-,Q183K,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.3.3       1781     16   0.9%   1 +[H69-,V70-,V213G,H245Y,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.3.3       1781     12   0.7%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.3.3       1781      9   0.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,K921R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.2.18      1779   1061  59.6%   0 +[H69-,V70-,V213G,G339D,K444R,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.18      1779     70   3.9%   1 +[H69-,V70-,L212S,V213G,G339D,K444R,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.18      1779     65   3.7%   2 +[H69-,V70-,H146-,V213G,G339D,K444R,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.18      1779     36   2.0%   2 +[H69-,V70-,G181V,V213G,G339D,K444R,L452R,F486V,I934V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.18      1779     29   1.6%   1 +[H69-,V70-,V213G,G339D,K444R,N450D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.2.23      1778   1254  70.5%   0 +[H69-,V70-,Y145H,V213G,S255F,G339D,V445A,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.23      1778     89   5.0%   1 +[H69-,V70-,V213G,S255F,G339D,V445A,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.23      1778     62   3.5%   1 +[H69-,V70-,Y145H,V213G,S255F,G339D,V445A,L452R,F486V,E1202Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.23      1778     29   1.6%   1 +[H69-,V70-,Y145H,V213G,S255F,G339D,V445A,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.23      1778     22   1.2%   1 +[H69-,V70-,Y145H,V213G,S255F,G339D,V445A,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,N460K,F486P,F490S] 

BQ.1.1.8       1775   1027  57.9%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.8       1775    389  21.9%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.8       1775     20   1.1%   1 +[H69-,V70-,K150N,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.8       1775     15   0.8%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,P1162L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.8       1775     14   0.8%   1 +[H69-,V70-,K147N,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BA.5.1.12      1767    957  54.2%   0 +[H69-,V70-,V213G,G339D,V445A,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.12      1767    205  11.6%   1 +[H69-,V70-,V213G,G339D,V445A,L452R,F486V,A1070V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.12      1767     70   4.0%   1 +[H69-,V70-,V213G,G339D,V445A,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.12      1767     49   2.8%   2 +[H69-,V70-,V213G,S255F,G339D,V445A,L452R,F486V,T747I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.12      1767     36   2.0%   2 +[H69-,V70-,N185D,V213G,G339D,V445A,L452R,F486V,A1070V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.116         1740    791  45.5%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.116         1740    212  12.2%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,P1162L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.116         1740    192  11.0%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.116         1740     51   2.9%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,V772I,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.116         1740     35   2.0%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.3.17      1739   1591  91.5%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.3.17      1739     21   1.2%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.17      1739     21   1.2%   1 +[V213G,L216F,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.17      1739     14   0.8%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.17      1739      9   0.5%   1 +[V213G,G339D,Q493R,P1162L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

Q.4            1727   1380  79.9%   0 +[H69-,V70-,A570D,P681R,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
Q.4            1727     46   2.7%   1 +[H69-,V70-,R408G,A570D,P681R,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
Q.4            1727     23   1.3%   1 +[H69-,V70-,A570D,P681R,T716I,S943P,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
Q.4            1727     22   1.3%   1 +[H69-,V70-,V308L,A570D,P681R,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
Q.4            1727     19   1.1%   1 +[L5F,H69-,V70-,A570D,P681R,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.21        1722   1291  75.0%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.21        1722    176  10.2%   1 +[V213G,G339D,Q493R,Q1113K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.21        1722     58   3.4%   1 +[W64L,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.21        1722     23   1.3%   1 +[V213G,G339D,Q493R,S939F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.21        1722     22   1.3%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

XBB.1.5.24     1718   1045  60.8%   0  (consensus)
XBB.1.5.24     1718     38   2.2%   1 +[T883I] 
XBB.1.5.24     1718     27   1.6%   1 +[L5F] 
XBB.1.5.24     1718     23   1.3%   1 +[H146K]-[H146Q] 
XBB.1.5.24     1718     23   1.3%   1 -[R408S] 

B.1.1.306      1711    779  45.5%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.306      1711    131   7.7%   4 +[L18F,E484K,Q675H]-[T19I,L24-,P25-,P26-,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.306      1711    121   7.1%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.1.306      1711     48   2.8%   1 +[Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.306      1711     33   1.9%   1 +[L18F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.2           1710   1149  67.2%   0 +[T19R,V70F,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.2           1710    272  15.9%   1 +[T19R,V70F,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.2           1710     26   1.5%   1 +[T19R,V70F,E156G,F157-,R158-,A222V,L452R,P681R,D950N,V1228L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.2           1710     22   1.3%   2 +[T19R,V70F,E156G,F157-,R158-,A222V,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.2           1710     20   1.2%   1 +[T19R,V70F,E156G,F157-,R158-,A222V,K356N,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.1.15      1696    946  55.8%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.15      1696    160   9.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.15      1696    122   7.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.15      1696     48   2.8%   1 +[H69-,V70-,V213G,V289I,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.15      1696     39   2.3%   1 +[H69-,V70-,S98F,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.619.1      1691   1435  84.9%   0 +[I210T,E484K,D936N,S939F,T1027I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.619.1      1691     66   3.9%   1 +[T20I,I210T,E484K,D936N,S939F,T1027I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.619.1      1691     17   1.0%   1 +[G75V,I210T,E484K,D936N,S939F,T1027I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.619.1      1691     11   0.7%   1 +[L18F,I210T,E484K,D936N,S939F,T1027I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.619.1      1691     10   0.6%   1 +[I210T,E484K,D936N,S939F,T1027I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.2.3.8      1689   1222  72.4%   0 +[D253G,T478R,P521S]-[G252V,T478K] (consensus)
XBB.2.3.8      1689     25   1.5%   1 +[H146K,D253G,T478R,P521S]-[H146Q,G252V,T478K] 
XBB.2.3.8      1689     22   1.3%   1 +[D253G,S255F,T478R,P521S]-[G252V,T478K] 
XBB.2.3.8      1689     12   0.7%   2 +[V213D,R246K,D253G,T478R,P521S]-[V213E,G252V,T478K] 
XBB.2.3.8      1689     11   0.7%   1 +[T51I,D253G,T478R,P521S]-[G252V,T478K] 

FY.3.1         1671    659  39.4%   0 +[H146K,Y200C,I210T]-[H146Q] (consensus)
FY.3.1         1671    397  23.8%   1 +[Y200C,I210T] 
FY.3.1         1671     64   3.8%   3 +[Y200C,I210T,L244F,H245-] 
FY.3.1         1671     43   2.6%   2 +[Y200C,I210T,P384H] 
FY.3.1         1671     36   2.2%   2 +[Y200C,I210T,Q493L] 

XBB.2.3.2      1668   1000  60.0%   0 +[G184V,D253G,P521S]-[G252V] (consensus)
XBB.2.3.2      1668     55   3.3%   1 +[K147N,G184V,D253G,P521S]-[G252V] 
XBB.2.3.2      1668     38   2.3%   1 +[H146K,G184V,D253G,P521S]-[H146Q,G252V] 
XBB.2.3.2      1668     21   1.3%   1 +[L5F,G184V,D253G,P521S]-[G252V] 
XBB.2.3.2      1668     20   1.2%   1 +[G184V,D253G,P521S,S929T]-[G252V] 

XBB.1.5.10     1668   1173  70.3%   0 +[F456L] (consensus)
XBB.1.5.10     1668     44   2.6%   1 +[F456L,I569V] 
XBB.1.5.10     1668     35   2.1%   1 +[F456L]-[K417N] 
XBB.1.5.10     1668     35   2.1%   1 +[H146K,F456L]-[H146Q] 
XBB.1.5.10     1668     30   1.8%   1 +[L8F,F456L] 

BE.11          1667   1374  82.4%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BE.11          1667     99   5.9%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.11          1667     23   1.4%   1 +[H69-,V70-,G181R,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.11          1667     16   1.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,S691F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.11          1667      9   0.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,C1243F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BQ.1.1.40      1650   1183  71.7%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.40      1650     58   3.5%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E619Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.40      1650     57   3.5%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.40      1650     23   1.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,G1124V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.40      1650     18   1.1%   6 +[L24S,P25Y,Y28-,T29-,H69-,V70-,V213G,G339D,K444T,L452R,F486V,E619Q]-[L24-,P25-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

B.1.577        1641    938  57.2%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.577        1641    119   7.3%   1 +[I834T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.577        1641    105   6.4%   1 +[V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.577        1641     31   1.9%   1 +[R21K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.577        1641     30   1.8%   2 +[Q52R,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.1.17      1637   1164  71.1%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.17      1637     69   4.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.17      1637     50   3.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T547I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.17      1637     24   1.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,M740I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.17      1637     18   1.1%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.4.1.8       1633   1286  78.8%   0 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.4.1.8       1633     40   2.4%   1 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.4.1.8       1633     17   1.0%   1 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V,D936Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.1.8       1633     12   0.7%   1 +[V3G,H69-,V70-,W152L,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.1.8       1633     10   0.6%   3 +[V3G,H69-,V70-,W152L,N211-,L212I,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.2.31        1630    911  55.9%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.31        1630    273  16.7%   1 +[V213G,G339D,Q493R,N925S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.31        1630    165  10.1%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.31        1630     66   4.0%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.2.31        1630     28   1.7%   2 +[H69-,V70-,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.2.7       1624   1158  71.3%   0 +[H69-,V70-,V213G,G339D,K444M,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.7       1624     85   5.2%   1 +[H69-,V70-,V213G,Y248H,G339D,K444M,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.7       1624     24   1.5%   1 +[H69-,V70-,V213G,G339D,K444M,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S,H655Y] 
BA.5.2.7       1624     23   1.4%   1 +[H69-,V70-,V213G,T299I,G339D,K444M,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.7       1624     23   1.4%   5 +[H69-,V70-,V213G,G339D,K444M,L452R,F486V]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.36.17      1605   1318  82.1%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.36.17      1605     38   2.4%   1 +[R102I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.17      1605     36   2.2%   1 +[A27V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.17      1605     15   0.9%   1 +[V308L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.17      1605      9   0.6%   1 +[G946V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5.20     1600    973  60.8%   0  (consensus)
XBB.1.5.20     1600     62   3.9%   1 +[Q954Y]-[Q954H] 
XBB.1.5.20     1600     41   2.6%   1 +[H146K]-[H146Q] 
XBB.1.5.20     1600     33   2.1%   1 -[K417N] 
XBB.1.5.20     1600     33   2.1%   1 -[R408S] 

BA.5.2.57      1600    976  61.0%   0 +[H69-,V70-,V213G,G339D,R346S,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.57      1600     89   5.6%   1 +[H69-,V70-,L176F,V213G,G339D,R346S,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.57      1600     70   4.4%   1 +[H69-,V70-,V213G,P251L,G339D,R346S,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.57      1600     39   2.4%   1 +[H69-,V70-,H146Y,V213G,G339D,R346S,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.57      1600     36   2.2%   1 +[H69-,V70-,V213G,G339D,R346S,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

BE.1.1.1       1600    828  51.8%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BE.1.1.1       1600    166  10.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,T859S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.1.1.1       1600     65   4.1%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.1.1.1       1600     40   2.5%   1 +[H69-,V70-,V213G,G339D,D420N,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.1.1.1       1600     33   2.1%   1 +[H69-,V70-,V213G,T299I,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.5.3         1599    978  61.2%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.5.3         1599    282  17.6%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.5.3         1599     32   2.0%   2 +[T19R,E156G,F157-,R158-,A263V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.5.3         1599     30   1.9%   1 +[T19R,E156G,F157-,R158-,A263V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.5.3         1599     16   1.0%   2 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.596        1596    888  55.6%   0 +[V1228L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.596        1596     66   4.1%   2 +[Q677P]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.596        1596     60   3.8%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.596        1596     50   3.1%   1 +[T20I,V1228L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.596        1596     34   2.1%   1 +[D627H,V1228L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.3.2       1595   1328  83.3%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.3.2       1595     26   1.6%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.2       1595     17   1.1%   1 +[V213G,G339D,L452M,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.2       1595      9   0.6%   1 +[W64R,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.2       1595      8   0.5%   1 +[L5F,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.1.13        1593   1217  76.4%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.13        1593     55   3.5%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.13        1593     37   2.3%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 
BA.1.13        1593     24   1.5%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.13        1593     17   1.1%   2 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,V622I,A706V,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

BF.22          1591   1338  84.1%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.22          1591     50   3.1%   1 +[H69-,V70-,V213G,T323A,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.22          1591     33   2.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,G1251V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.22          1591     21   1.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T547I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.22          1591     20   1.3%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BE.1.2.1       1588   1153  72.6%   0 +[H69-,V70-,V213G,G339D,V445A,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BE.1.2.1       1588     44   2.8%   1 +[H69-,V70-,V213G,G339D,V445A,L452R,F486V,E554A]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.1.2.1       1588     26   1.6%   1 +[H69-,V70-,V213G,G339D,V445A,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.1.2.1       1588     20   1.3%   1 +[H69-,V70-,V213G,G339D,V445A,L452R,F486V,T638R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.1.2.1       1588     17   1.1%   1 +[H69-,V70-,V213G,G339D,V445A,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

AY.45          1581    677  42.8%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.45          1581    270  17.1%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.45          1581    126   8.0%   2 +[T19R,E156G,F157-,R158-,L452R,P681R,P792S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.45          1581     43   2.7%   2 +[T19R,E156G,F157-,R158-,L452R,P681R,T747I,D936N,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.45          1581     30   1.9%   2 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.122.1       1579    700  44.3%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,T791I,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.122.1       1579    415  26.3%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,T791I,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122.1       1579     52   3.3%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,T791I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122.1       1579     21   1.3%   2 +[T19R,E156G,F157-,R158-,L452R,P681R,T791I,D950N,L1049I]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122.1       1579     21   1.3%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,T791I,D950N,L1203F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.1.16      1576   1311  83.2%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.16      1576     59   3.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,Q1208H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.16      1576     30   1.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T1006I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.16      1576     27   1.7%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.16      1576     25   1.6%   1 +[H69-,V70-,V213G,D215G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BM.1.1.3       1572    917  58.3%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
BM.1.1.3       1572     47   3.0%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,F486S,S494P]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BM.1.1.3       1572     33   2.1%   1 +[K147E,W152R,F157L,N185T,I210V,V213G,G257S,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BM.1.1.3       1572     32   2.0%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,F486S,F490P]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BM.1.1.3       1572     29   1.8%   4 +[K147E,W152R,F157L,I210V,V213G,G257S,F486S]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

BK.1           1567   1222  78.0%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BK.1           1567     51   3.3%   1 +[H69-,V70-,V213G,G339D,V445A,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BK.1           1567     31   2.0%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BK.1           1567     15   1.0%   2 +[L5F,H69-,V70-,V213G,G339D,V445A,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BK.1           1567     12   0.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

EG.1.6         1555    916  58.9%   0 +[Q613H] (consensus)
EG.1.6         1555    106   6.8%   1 +[H146K,Q613H]-[H146Q] 
EG.1.6         1555     53   3.4%   1 +[Q613H,V642-] 
EG.1.6         1555     41   2.6%   1 +[N148T,Q613H] 
EG.1.6         1555     35   2.3%   1 +[Q613H,G1124V] 

XB             1555    861  55.4%   0 +[L18R,T95I,R158S,A688V,S735A,T1027I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] (consensus)
XB             1555    109   7.0%   1 +[L18R,T95I,R158S,A688V,S735A,T1027I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
XB             1555     48   3.1%   1 +[L18R,T95I,R158S,A688V,S735A,S939F,T1027I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
XB             1555     39   2.5%   1 +[L18R,T95I,R158S,A688V,S735A,T1027I,Y1206F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
XB             1555     28   1.8%   2 +[L18R,T95I,R158S,E484Q,A688V,S735A,T1027I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

BF.7.21        1554   1078  69.4%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.7.21        1554     67   4.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.21        1554     32   2.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,G1267E]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.21        1554     31   2.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.7.21        1554     22   1.4%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.2.55      1551   1073  69.2%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.55      1551    197  12.7%   1 +[H69-,V70-,V213G,G339D,K444M,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.55      1551     49   3.2%   2 +[H69-,V70-,N164K,V213G,G339D,K444M,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.55      1551     31   2.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,E702D]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.55      1551     15   1.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T1009I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.94          1549    581  37.5%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.94          1549    542  35.0%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.94          1549     65   4.2%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,D1153Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.94          1549     54   3.5%   2 +[T19R,E156G,F157-,R158-,S255F,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.94          1549     28   1.8%   1 +[T19R,E156G,F157-,R158-,L452R,A475V,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.40           1548   1275  82.4%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.40           1548     29   1.9%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.40           1548     24   1.6%   1 +[A27V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.40           1548     20   1.3%   1 +[A845S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.40           1548     14   0.9%   1 +[L176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.38          1548   1212  78.3%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.38          1548     83   5.4%   1 +[A67V,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.38          1548     31   2.0%   1 +[H69-,V70-,D111N,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.38          1548     21   1.4%   2 +[A67V,H69-,V70-,V213G,G339D,L452R,F486V,K1073N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.38          1548     20   1.3%   1 +[H69-,V70-,V213G,V308L,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BE.10          1545    905  58.6%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BE.10          1545     93   6.0%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BE.10          1545     46   3.0%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,F486P,F490S] 
BE.10          1545     39   2.5%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BE.10          1545     35   2.3%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,F486P,F490S] 

B.1.128        1543   1224  79.3%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.128        1543    142   9.2%   1 +[P809S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.128        1543     60   3.9%   1 +[A1020S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.128        1543     21   1.4%   1 +[A879S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.128        1543     15   1.0%   2 +[P809S,G1085E]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

JF.1           1534   1209  78.8%   0 +[E180V,L455F,F456L,T478R]-[T478K] (consensus)
JF.1           1534     50   3.3%   1 +[H146K,E180V,L455F,F456L,T478R]-[H146Q,T478K] 
JF.1           1534     32   2.1%   1 +[E180V,L455F,F456L,A475V,T478R]-[T478K] 
JF.1           1534     15   1.0%   2 +[Q14H,E180V,L455F,F456L,T478R,S810L]-[T478K] 
JF.1           1534     15   1.0%   1 +[E180V,L455F,F456L,T478R,G482R]-[T478K] 

B.1.1.39       1534    563  36.7%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.39       1534    396  25.8%   1 +[S673T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.39       1534    125   8.1%   1 +[M1229I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.39       1534     55   3.6%   1 +[S939F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.39       1534     37   2.4%   1 +[V1228L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.53          1531    686  44.8%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.53          1531    408  26.6%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.53          1531     42   2.7%   2 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.53          1531     24   1.6%   1 +[L5F,T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.53          1531     18   1.2%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,C1253F]-[T19I,L24-,P25-,P26-,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.39.2        1516    870  57.4%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,K1073N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.39.2        1516    332  21.9%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,K1073N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.39.2        1516     22   1.5%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,V635A,P681R,D950N,K1073N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.39.2        1516     20   1.3%   1 +[T19R,T95I,E156G,F157-,R158-,A222V,L452R,P681R,D950N,K1073N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.39.2        1516     15   1.0%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q613H,P681R,D950N,K1073N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.75        1516    597  39.4%   0 +[K147E,W152R,F157L,I210V,V213G,G257S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,F486P,F490S] (consensus)
BA.2.75        1516    148   9.8%   4 +[K147E,W152R,F157L,I210V,V213G,G257S]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,F486P,F490S] 
BA.2.75        1516     42   2.8%   3 +[K147E,W152R,F157L,I210V,V213G,G257S,F486S,D1199N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BA.2.75        1516     39   2.6%   1 +[K147E,W152R,F157L,I210V,V213G,G257S]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,F486P,F490S] 
BA.2.75        1516     21   1.4%   5 +[K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,G446S,F486P,F490S] 

BN.1.2.2       1513   1030  68.1%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
BN.1.2.2       1513    108   7.1%   1 +[K147E,W152R,F157L,I210V,V213G,A222V,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.2.2       1513     18   1.2%   1 +[H49Y,K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.2.2       1513     15   1.0%   1 +[K147E,W152R,F157L,I210V,V213G,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.2.2       1513     15   1.0%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,A942S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 

CH.1.1.2       1501   1057  70.4%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S,T883I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
CH.1.1.2       1501     36   2.4%   1 +[L5F,K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S,T883I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1.2       1501     31   2.1%   1 +[I68T,K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S,T883I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1.2       1501     31   2.1%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S,P809Q,T883I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1.2       1501     21   1.4%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S,T549I,T883I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

AY.4.4         1500    839  55.9%   0 +[L5F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,S929T,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4.4         1500    185  12.3%   1 +[L5F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,S929T,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.4         1500     30   2.0%   1 +[L5F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,Q853H,S929T,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.4         1500     25   1.7%   1 +[L5F,T19R,G75V,T95I,E156G,F157-,R158-,L452R,P681R,S929T,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.4         1500     23   1.5%   2 +[L5F,T19R,G75V,T95I,E156G,F157-,R158-,L452R,P681R,S929T,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.3.2       1499   1224  81.7%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.3.2       1499     47   3.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.3.2       1499     29   1.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S,P681H] 
BA.5.3.2       1499     17   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,D936Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.3.2       1499      8   0.5%   2 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

B.1.177.35     1496   1157  77.3%   0 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.35     1496     68   4.5%   1 +[A222V,I410V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.35     1496     60   4.0%   1 +[L176F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.35     1496     27   1.8%   1 +[A222V]-[L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.35     1496     17   1.1%   1 +[A222V,C1243F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.106         1491    523  35.1%   0 +[T19R,T95I,E156G,F157-,R158-,S255F,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.106         1491    224  15.0%   1 +[T19R,T95I,E156G,F157-,R158-,S255F,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.106         1491    101   6.8%   1 +[T19R,T95I,E156G,F157-,R158-,S255F,L452R,P681R,D950N,A1087S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.106         1491     54   3.6%   2 +[T19R,T95I,E156G,F157-,R158-,S255F,L452R,P681R,D950N,A1087S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.106         1491     28   1.9%   2 +[T19R,T95I,E156G,F157-,R158-,S255F,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.4.10        1484   1273  85.8%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,P812S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4.10        1484     41   2.8%   1 +[L5F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,P812S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.10        1484     12   0.8%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,P812S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.10        1484     12   0.8%   2 +[L5F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,P812S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.10        1484     11   0.7%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,P812S,D950N,C1236F]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.1.68      1483    975  65.7%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.68      1483    156  10.5%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.68      1483     64   4.3%   1 +[V36I,H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.68      1483     17   1.1%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,M1237T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.68      1483     16   1.1%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E554K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BQ.1.10.1      1482   1052  71.0%   0 +[H69-,V70-,H146L,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.10.1      1482    148  10.0%   2 +[H69-,V70-,Y145L,H146-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.10.1      1482     19   1.3%   1 +[H69-,V70-,H146L,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,F486P,F490S] 
BQ.1.10.1      1482     14   0.9%   1 +[H66Y,H69-,V70-,H146L,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.10.1      1482     12   0.8%   1 +[H69-,V70-,H146L,V213G,G339D,K444T,L452R,F486V,A1020V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

EF.1.1         1476   1097  74.3%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
EF.1.1         1476     53   3.6%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,T883I]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
EF.1.1         1476     32   2.2%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,K417N,V445P,G446S,F486P,F490S] 
EF.1.1         1476     22   1.5%   1 +[H69-,V70-,V213G,G339D,K444T,G446R,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
EF.1.1         1476     16   1.1%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,R408S,V445P,G446S,F486P,F490S] 

A.2.5          1469    569  38.7%   0 +[L141-,G142-,V143-,D215A,+215AGY,L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
A.2.5          1469     80   5.4%   4 +[L141-,G142-,V143-,L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
A.2.5          1469     75   5.1%   3 +[D215A,+215AGY,L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
A.2.5          1469     43   2.9%   1 +[L141-,G142-,V143-,D215A,+215AGY,L452R,G1219C]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
A.2.5          1469     32   2.2%   2 +[L141-,G142-,V143-,D215A,+215AGY,L452R,T739I,T859I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.1.22      1466   1189  81.1%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.22      1466     20   1.4%   1 +[H69-,V70-,V213G,A260V,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.22      1466     20   1.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[T19I,V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.22      1466     15   1.0%   1 +[H69-,V70-,W152L,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.22      1466     13   0.9%   2 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E1150D,E1202Q]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BF.36          1465   1132  77.3%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.36          1465     63   4.3%   1 +[H69-,V70-,V213G,Q271E,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.36          1465     49   3.3%   1 +[H69-,V70-,V213G,G339D,N450D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.36          1465     15   1.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BF.36          1465     13   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

B.1.1.298      1460    980  67.1%   0 +[H69-,V70-,Y453F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.298      1460    148  10.1%   1 +[H69-,V70-,Y453F,S1147L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.298      1460    108   7.4%   2 +[Y453F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.298      1460     30   2.1%   3 +[L5F,H69-,V70-,Y453F,N751Y,C1250F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.298      1460     18   1.2%   1 +[H69-,V70-,Y453F,G1167V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.609        1457    769  52.8%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.609        1457    289  19.8%   3 +[L5F,L176F,T478R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.609        1457     35   2.4%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.609        1457     17   1.2%   3 +[G75V,Q779R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.609        1457     15   1.0%   1 +[N679S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.2.16      1444   1017  70.4%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.16      1444     36   2.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.16      1444     35   2.4%   2 +[H69-,V70-,V213G,G339D,K444M,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BA.5.2.16      1444     23   1.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.16      1444     23   1.6%   1 +[H69-,V70-,V213G,S255F,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BQ.1.1.41      1444    885  61.3%   0 +[H69-,V70-,K182I,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.41      1444     63   4.4%   1 +[H69-,V70-,K182I,V213G,G339D,K444T,L452R,F486V,I931V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.41      1444     54   3.7%   1 +[H69-,V70-,K182I,V213G,G339D,K444T,L452R,F486V,P1162L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.41      1444     43   3.0%   1 +[H69-,V70-,K182I,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.41      1444     43   3.0%   1 +[L5F,H69-,V70-,K182I,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

B.1.279        1441    701  48.6%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.279        1441    317  22.0%   1 +[L1224F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.279        1441    268  18.6%   2 +[L18F,L1224F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.279        1441     43   3.0%   1 +[Y28H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.279        1441     16   1.1%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5.48     1431    964  67.4%   0  (consensus)
XBB.1.5.48     1431     47   3.3%   1 -[K417N] 
XBB.1.5.48     1431     35   2.4%   1 +[H146K]-[H146Q] 
XBB.1.5.48     1431     18   1.3%   1 +[N148T] 
XBB.1.5.48     1431     16   1.1%   1 +[T478R]-[T478K] 

FL.2.3         1428    809  56.7%   0  (consensus)
FL.2.3         1428    219  15.3%   1 +[H146K]-[H146Q] 
FL.2.3         1428     27   1.9%   1 +[F456L] 
FL.2.3         1428     23   1.6%   1 +[V642G] 
FL.2.3         1428     18   1.3%   2 +[H146K,P521S]-[H146Q] 

FD.2           1425    953  66.9%   0 +[H146K]-[H146Q] (consensus)
FD.2           1425    144  10.1%   1  
FD.2           1425     13   0.9%   1 +[H146K,T307I]-[H146Q] 
FD.2           1425     13   0.9%   1 +[H146K]-[Y144-,H146Q] 
FD.2           1425     12   0.8%   1 +[V70G,H146K]-[H146Q] 

BF.39          1418   1102  77.7%   0 +[H69-,V70-,G181V,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.39          1418     66   4.7%   1 +[H69-,V70-,G181V,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.39          1418     26   1.8%   1 +[H69-,V70-,G181V,V213G,G339D,R346S,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.39          1418     12   0.8%   2 +[H69F,V70-,S71-,G181V,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.39          1418     12   0.8%   1 +[H69-,V70-,G181V,V213G,G339D,L452R,F486V]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.1.34      1410    997  70.7%   0 +[H69-,V70-,K147-,N149-,V213G,G339D,L452R,F486V,P1162S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.34      1410    185  13.1%   2 +[H69-,V70-,V213G,G339D,L452R,F486V,P1162S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.34      1410     50   3.5%   1 +[H69-,V70-,K147-,N149-,V213G,G339D,L452R,F486V,P1162S,Q1201K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.34      1410     30   2.1%   1 +[H69-,V70-,K147-,N149-,V213G,L216F,G339D,L452R,F486V,P1162S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.34      1410     17   1.2%   1 +[H69-,V70-,K147-,N149-,V213G,G339D,L452R,F486V,P1162S,C1247F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BN.1.3.5       1409    964  68.4%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
BN.1.3.5       1409     71   5.0%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,E471Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.3.5       1409     26   1.8%   2 +[H69-,V70-,K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.3.5       1409     21   1.5%   1 +[G75S,K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.3.5       1409     16   1.1%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 

B.1.110.3      1405   1090  77.6%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.110.3      1405     52   3.7%   1 +[D138Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.110.3      1405     34   2.4%   1 +[E484K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.110.3      1405     17   1.2%   1 +[I210V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.110.3      1405     15   1.1%   1 +[S373L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5.33     1397    934  66.9%   0  (consensus)
XBB.1.5.33     1397     55   3.9%   1 +[R237K] 
XBB.1.5.33     1397     32   2.3%   1 +[T883I] 
XBB.1.5.33     1397     25   1.8%   1 +[H146K]-[H146Q] 
XBB.1.5.33     1397     23   1.6%   1 -[K417N] 

B.1.623        1397    731  52.3%   0 +[S494P,K854N,E1111K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] (consensus)
B.1.623        1397    390  27.9%   1 +[S494P,E1111K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.623        1397     35   2.5%   1 +[T385I,S494P,K854N,E1111K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.623        1397     28   2.0%   2 +[T95I,S494P,E1111K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.623        1397     17   1.2%   2 +[S494P,T678I,E1111K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

AY.43.4        1396    276  19.8%   0 +[T19R,E156G,F157-,R158-,K356R,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.4        1396    271  19.4%   2 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.4        1396    218  15.6%   1 +[T19R,E156G,F157-,R158-,K356R,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.43.4        1396    207  14.8%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.4        1396     80   5.7%   2 +[T19R,E156G,F157-,R158-,K356R,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

FD.1.1         1394    993  71.2%   0 +[F456L] (consensus)
FD.1.1         1394     35   2.5%   1 +[H146K,F456L]-[H146Q] 
FD.1.1         1394     30   2.2%   1 +[L5F,F456L] 
FD.1.1         1394     22   1.6%   1 +[R102G,F456L] 
FD.1.1         1394     18   1.3%   1 +[F456L,P812L] 

B.1.36.29      1393    631  45.3%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.36.29      1393    141  10.1%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.29      1393     27   1.9%   1 +[D138Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.29      1393     19   1.4%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.36.29      1393     14   1.0%   1 +[Q675H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.177.44     1389   1108  79.8%   0 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.44     1389     45   3.2%   1 +[S98F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.44     1389     25   1.8%   1 +[A222V,A1020S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.44     1389     24   1.7%   2 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.44     1389     12   0.9%   1 +[L176F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.1.1.11      1386    865  62.4%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.1.11      1386    115   8.3%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.11      1386     86   6.2%   4 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 
BA.1.1.11      1386     37   2.7%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 
BA.1.1.11      1386     22   1.6%   4 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,N440K,V445P,N460K,F486P,F490S] 

B.1.621.1      1384    992  71.7%   0 +[T95I,+143T,Y144S,Y145N,R346K,E484K,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] (consensus)
B.1.621.1      1384     61   4.4%   1 +[T95I,Y144S,Y145N,R346K,E484K,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.621.1      1384     26   1.9%   2 +[T95I,Y144S,R346K,E484K,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.621.1      1384     20   1.4%   1 +[T95I,+143T,Y144S,Y145N,R346K,E484K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.621.1      1384     16   1.2%   3 +[T95I,R346K,E484K,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

BA.5.2.43      1380   1066  77.2%   0 +[H69-,V70-,K147Q,V213G,G339D,G446D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BA.5.2.43      1380     35   2.5%   1 +[H69-,V70-,K147Q,V213G,G339D,G446D,L452R,F486V,L1265P]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BA.5.2.43      1380     17   1.2%   1 +[H69-,V70-,V213G,G339D,G446D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BA.5.2.43      1380     13   0.9%   3 +[H69-,V70-,E154D,V213G,G339D,G446D,L452R,F486V,T883I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BA.5.2.43      1380      9   0.7%   1 +[V62L,H69-,V70-,K147Q,V213G,G339D,G446D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

DL.1           1379    756  54.8%   0 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V,Q677H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
DL.1           1379     79   5.7%   1 +[H69-,V70-,K147N,V213G,G339D,K444N,L452R,F486V,Q677H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
DL.1           1379     51   3.7%   1 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V,Q677H]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
DL.1           1379     41   3.0%   1 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V,Q677H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,F486P,F490S] 
DL.1           1379     38   2.8%   1 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V,Q677H]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

BA.1.19        1376    952  69.2%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.19        1376     64   4.7%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.19        1376     59   4.3%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,V445P,N460K,F486P,F490S] 
BA.1.19        1376     46   3.3%   5 +[A67V,H69-,V70-,T95I,V143-,Y145-,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.19        1376     23   1.7%   4 +[H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

AY.38          1373    304  22.1%   0 +[T19R,E156G,F157-,R158-,A222V,T250S,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.38          1373    189  13.8%   2 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.38          1373    174  12.7%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.38          1373    149  10.9%   3 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.38          1373     97   7.1%   2 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.565        1371    889  64.8%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.565        1371    182  13.3%   1 +[A1070S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.565        1371     29   2.1%   1 +[D138H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.565        1371     25   1.8%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.565        1371     21   1.5%   1 +[E309Q]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.1.35      1369   1055  77.1%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.35      1369     35   2.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.35      1369     31   2.3%   1 +[H69-,V70-,F157L,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.35      1369     23   1.7%   1 +[H69-,V70-,V213G,A260T,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.35      1369     19   1.4%   1 +[H69-,V70-,G184D,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.62          1361    618  45.4%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.62          1361    334  24.5%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.62          1361     36   2.6%   2 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,N978S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.62          1361     33   2.4%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,G946V,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.62          1361     32   2.4%   2 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

None           1354    110   8.1%   0 +[Q52H,F456L] 
None           1354     89   6.6%   2 +[Q52H,F157L,L452R,F456L] 
None           1354     75   5.5%   1 +[Q52H,L455F,F456L] 
None           1354     71   5.2%  42 +[+16MPLF,R21T,S50L,H69-,V70-,V127F,F157S,R158G,N211-,L212I,V213G,L216F,H245N,A264D,I332V,K356T,R403K,V445H,N450D,L452W,L455S,N481K,V483-,E484K,E554K,A570V,P621S,P681R,S939F,P1143L]-[V83A,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,E484A,F490S,P681H] 
None           1354     61   4.5%   3 +[L455F,F456L,A475V] 

XBB.1.16.2     1353    845  62.5%   0 +[E180V,T478R]-[T478K] (consensus)
XBB.1.16.2     1353     82   6.1%   1 +[H146K,E180V,T478R]-[H146Q,T478K] 
XBB.1.16.2     1353     30   2.2%   1 +[E180V,T478R]-[K417N,T478K] 
XBB.1.16.2     1353     24   1.8%   1 +[L5I,E180V,T478R]-[T478K] 
XBB.1.16.2     1353     15   1.1%   1 +[E180V,N317S,T478R]-[T478K] 

BQ.1.1.13      1349    706  52.3%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.13      1349    164  12.2%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.13      1349     62   4.6%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,S939F]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.13      1349     31   2.3%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,R408S,V445P,G446S,F486P,F490S] 
BQ.1.1.13      1349     26   1.9%   2 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,I651V,T1066N]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BA.1.1.4       1346   1208  89.7%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.1.4       1346     32   2.4%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F,E1202Q]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.4       1346     13   1.0%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.4       1346     11   0.8%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.4       1346     10   0.7%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,H625R,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

B.1.232        1346    665  49.4%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.232        1346    402  29.9%   1 +[L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.232        1346     63   4.7%   1 +[R346K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.232        1346     36   2.7%   1 +[A475S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.232        1346      9   0.7%   2 +[L452R,G639S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BG.5           1345   1090  81.0%   0 +[V213G,G339D,L452Q,Q493R,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BG.5           1345     37   2.8%   1 +[V213G,G339D,L452Q,Q493R,S704L,T1077A]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BG.5           1345     35   2.6%   1 +[F32L,V213G,G339D,L452Q,Q493R,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BG.5           1345     22   1.6%   1 +[F157L,V213G,G339D,L452Q,Q493R,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BG.5           1345     12   0.9%   1 +[V213G,G339D,L452Q,Q493R,S704L]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.68          1329    675  50.8%   0 +[T19R,E156G,F157-,R158-,A222V,D253A,L452R,P681R,D950N,D979E]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.68          1329    219  16.5%   1 +[T19R,E156G,F157-,R158-,A222V,D253A,L452R,P681R,D950N,D979E]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.68          1329     53   4.0%   1 +[T19R,E156G,F157-,R158-,A222V,D253A,L452R,P681R,P809S,D950N,D979E]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.68          1329     33   2.5%   1 +[T19R,E156G,F157-,R158-,A222V,D253A,L452R,P681R,G885S,D950N,D979E]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.68          1329     31   2.3%   1 +[T19R,E156G,F157-,R158-,N211K,A222V,D253A,L452R,P681R,D950N,D979E]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.42.2     1328    872  65.7%   0 +[Q613H] (consensus)
XBB.1.42.2     1328     61   4.6%   1 +[G181A,Q613H] 
XBB.1.42.2     1328     20   1.5%   1 +[H146K,Q613H]-[H146Q] 
XBB.1.42.2     1328     19   1.4%   1 +[M177I,Q613H] 
XBB.1.42.2     1328     14   1.1%   1 +[Q613H,T1117I] 

BN.1.3.6       1327    790  59.5%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
BN.1.3.6       1327     41   3.1%   5 +[K147E,W152R,F157L,+209V,N211G,L212-,V213-,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.3.6       1327     35   2.6%   1 +[K147E,W152R,F157L,N185D,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.3.6       1327     33   2.5%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,A688V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.3.6       1327     27   2.0%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,V1122M]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 

BQ.1.1.51      1326    870  65.6%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.51      1326    124   9.4%   1 +[H69-,V70-,W152R,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.51      1326     55   4.1%   1 +[H69-,V70-,S98F,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.51      1326     30   2.3%   1 +[H69-,V70-,V213G,T250I,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.51      1326     24   1.8%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

XBB.1.5.31     1326    962  72.5%   0  (consensus)
XBB.1.5.31     1326     48   3.6%   1 +[M153V] 
XBB.1.5.31     1326     17   1.3%   1 +[H146K]-[H146Q] 
XBB.1.5.31     1326     17   1.3%   1 +[D1153Y] 
XBB.1.5.31     1326     14   1.1%   1 +[A701T] 

AY.7.2         1322    563  42.6%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.7.2         1322    393  29.7%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.7.2         1322     39   3.0%   1 +[V16F,T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.7.2         1322     21   1.6%   2 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.7.2         1322     19   1.4%   2 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,G1219C,M1237I]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

Q.2            1320    958  72.6%   0 +[H69-,V70-,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] (consensus)
Q.2            1320     58   4.4%   1 +[H69-,V70-,P272L,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
Q.2            1320     50   3.8%   1 +[H69-,V70-,H245Y,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
Q.2            1320     49   3.7%   2 +[A67V,H69-,V70-,A570D,T716I,I794T,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
Q.2            1320     38   2.9%   1 +[H69-,V70-,A570D,T716I,I794T,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

B.1.177.54     1313   1080  82.3%   0 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.54     1313     51   3.9%   1 +[L176F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.54     1313     19   1.4%   1 +[A222V,L1063F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.54     1313     18   1.4%   2 +[A222V,T859I,V860I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.54     1313     14   1.1%   1 +[A222V,S813I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BN.1.2.3       1312    873  66.5%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
BN.1.2.3       1312     35   2.7%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,N481K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.2.3       1312     33   2.5%   1 +[K147E,W152R,F157L,K187E,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.2.3       1312     27   2.1%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,E1111Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.2.3       1312     20   1.5%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,R408S,V445P,F486P] 

AY.90          1304    881  67.6%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.90          1304    213  16.3%   1 +[T19R,E156G,F157-,R158-,P174S,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.90          1304     26   2.0%   2 +[T19R,E156G,F157-,R158-,P174S,L452R,P681R,D950N,V1122L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.90          1304     23   1.8%   1 +[V16I,T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.90          1304     16   1.2%   1 +[T19R,E156G,F157-,R158-,S256L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.61          1301    898  69.0%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.61          1301    120   9.2%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.61          1301     42   3.2%   1 +[T19R,P85S,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.61          1301     17   1.3%   2 +[T19R,P85S,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.61          1301     14   1.1%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,C1235F]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.65          1299    456  35.1%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.65          1299    268  20.6%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.65          1299     59   4.5%   2 +[T19R,E156G,F157-,R158-,A222V,D228H,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.65          1299     51   3.9%   4 +[L5F,T19R,E156G,F157-,R158-,A222V,L452R,P681R,P809S,D950N,V1176F,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.65          1299     43   3.3%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.75.5      1299    752  57.9%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,F486P,F490S] (consensus)
BA.2.75.5      1299     56   4.3%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BA.2.75.5      1299     45   3.5%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,R346S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,F486P,F490S] 
BA.2.75.5      1299     43   3.3%   2 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,F490V,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,F486P,F490S] 
BA.2.75.5      1299     24   1.8%   4 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,F486P,F490S] 

AY.46.3        1292    573  44.3%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.46.3        1292    190  14.7%   1 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46.3        1292    115   8.9%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46.3        1292     46   3.6%   1 +[T19R,W64C,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46.3        1292     20   1.5%   2 +[T19R,W64C,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.1.291      1285   1122  87.3%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.291      1285     28   2.2%   1 +[Q52L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.291      1285     13   1.0%   1 +[Q580K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.291      1285     11   0.9%   1 +[L54F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.291      1285     11   0.9%   1 +[M1229I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.1.369      1282   1051  82.0%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.369      1282     54   4.2%   1 +[Q675H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.369      1282     30   2.3%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.369      1282     22   1.7%   2 +[L18F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.369      1282     16   1.2%   1 +[T859I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.22        1273   1044  82.0%   0 +[F186S,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.22        1273    113   8.9%   1 +[F186S,V213G,Y248H,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.22        1273     25   2.0%   1 +[F186S,V213G,G339D,Q493R,A924S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.22        1273     12   0.9%   1 +[F186S,V213G,G339D,Q493R,I1221V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.22        1273      5   0.4%   1 +[L5F,F186S,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BN.1.4         1270    968  76.2%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
BN.1.4         1270     19   1.5%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,V687L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.4         1270     11   0.9%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,K444R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.4         1270     10   0.8%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,L1141F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.4         1270      9   0.7%   1 +[T22N,K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 

XBB.1.5.72     1268    822  64.8%   0 +[F456L] (consensus)
XBB.1.5.72     1268     25   2.0%   1 +[H146K,F456L]-[H146Q] 
XBB.1.5.72     1268     24   1.9%   1 +[F456L,P812S] 
XBB.1.5.72     1268     20   1.6%   1 +[F456L,G946R] 
XBB.1.5.72     1268     18   1.4%   1 +[F456L]-[R408S] 

GS.4.1         1266    872  68.9%   0 +[N185D,D253G,T478R,P521S]-[G252V,T478K] (consensus)
GS.4.1         1266     35   2.8%   1 +[N185D,D253G,T478R,P521S,P561S]-[G252V,T478K] 
GS.4.1         1266     27   2.1%   1 +[N185D,D253G,T478R,P521S]-[T19I,G252V,T478K] 
GS.4.1         1266     23   1.8%   1 +[N185D,D253G,T478R,P521S,Q1201K]-[G252V,T478K] 
GS.4.1         1266     21   1.7%   1 +[N185D,D253G,T478R]-[G252V,T478K] 

BF.7.19        1259    907  72.0%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.7.19        1259     32   2.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,H1058Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.19        1259     18   1.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.7.19        1259     15   1.2%   2 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.7.19        1259     14   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

BA.2.12.2      1255   1152  91.8%   0 +[V213G,G339D,R357K,Q493R,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.12.2      1255     12   1.0%   2 +[V213G,G339D,R357K,Q493R,S704L,N1187D,C1236F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.12.2      1255     10   0.8%   1 +[V213G,G339D,R357K,Q493R,S704L,A783V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.12.2      1255      6   0.5%   1 +[V213G,G339D,R357K,Q493R,S704L,K1255R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.12.2      1255      5   0.4%   1 +[V213G,S255F,G339D,R357K,Q493R,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.2.20        1254   1085  86.5%   0 +[N148T,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.20        1254     44   3.5%   1 +[I68T,N148T,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.20        1254     21   1.7%   1 +[N148T,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.2.20        1254      8   0.6%   1 +[N148T,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.20        1254      6   0.5%   1 +[N148T,V213G,G339D,Q493R,S929T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.349        1253    816  65.1%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.349        1253    103   8.2%   1 +[E554D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.349        1253     83   6.6%   1 +[T22N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.349        1253     24   1.9%   1 +[E156V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.349        1253     20   1.6%   1 +[H49Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5.16     1246    815  65.4%   0  (consensus)
XBB.1.5.16     1246     41   3.3%   1 +[S704L] 
XBB.1.5.16     1246     30   2.4%   1 +[F456L] 
XBB.1.5.16     1246     23   1.8%   1 +[E661D] 
XBB.1.5.16     1246     23   1.8%   1 +[H146K]-[H146Q] 

BQ.1.1.70      1243   1006  80.9%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.70      1243     15   1.2%   1 +[L5F,H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.70      1243     15   1.2%   1 +[H69-,V70-,M153I,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.70      1243     12   1.0%   1 +[T19L,H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.70      1243     11   0.9%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,L938F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

B.1.1.63       1242    845  68.0%   0 +[S12F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.63       1242     39   3.1%   1 +[S12F,N148T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.63       1242     24   1.9%   1 +[S12F,E654K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.63       1242     24   1.9%   2 +[S12F,N148T,L176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.63       1242     21   1.7%   1 +[S12F,Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.2.31      1242    931  75.0%   0 +[H69-,V70-,L84I,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.31      1242     73   5.9%   1 +[H69-,V70-,L84I,K182N,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.31      1242     70   5.6%   1 +[H69-,V70-,L84I,W152L,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.31      1242     10   0.8%   1 +[H69-,V70-,L84I,V213G,G339D,L452R,F486V,T778I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.31      1242      6   0.5%   1 +[L5F,H69-,V70-,L84I,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

C.36.3         1240    705  56.9%   0 +[S12F,H69-,V70-,W152R,R346S,L452R,Q677H,A899S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
C.36.3         1240     62   5.0%   1 +[S12F,H69-,V70-,W152R,R346S,L452R,Q677H,A899S,P1162L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
C.36.3         1240     20   1.6%   1 +[S12F,S13I,H69-,V70-,W152R,R346S,L452R,Q677H,A899S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
C.36.3         1240     17   1.4%   1 +[S12F,H69-,V70-,W152R,R346S,L452R,T547I,Q677H,A899S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
C.36.3         1240     15   1.2%   1 +[S12F,H69-,V70-,W152R,D253Y,R346S,L452R,Q677H,A899S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.2.33      1240    881  71.0%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.33      1240     69   5.6%   1 +[H69-,V70-,K147I,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.33      1240     44   3.5%   1 +[H69-,V70-,V213G,G339D,N450D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.33      1240     14   1.1%   6 +[H69-,V70-,V213G,G339D,N450D,L452R,F486V]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.33      1240     13   1.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

BQ.1.1.67      1240    863  69.6%   0 +[H69-,V70-,L176F,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.67      1240     52   4.2%   1 +[H69-,V70-,L176F,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.67      1240     30   2.4%   1 +[H69-,V70-,L176F,V213G,G339D,K444M,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.67      1240     26   2.1%   1 +[H69-,V70-,L176F,V213G,G339D,K444T,L452R,F486V,K1154R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.67      1240     20   1.6%   1 +[H69-,V70-,L176F,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

AY.64          1238    716  57.8%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,K1191N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.64          1238    272  22.0%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,K1191N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.64          1238     44   3.6%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,A701S,D950N,K1191N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.64          1238     15   1.2%   2 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,K1191N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.64          1238     12   1.0%   2 +[T19R,E156G,F157-,R158-,F186L,A222V,T385I,L452R,P681R,D950N,K1191N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

EG.2           1232    636  51.6%   0 +[T478R]-[T478K] (consensus)
EG.2           1232     69   5.6%   2 +[T478R,Q613H,A852S]-[T478K] 
EG.2           1232     30   2.4%   1 +[T478R]-[K417N,T478K] 
EG.2           1232     23   1.9%   1 +[F186L,T478R]-[T478K] 
EG.2           1232     21   1.7%   1 +[N185S,T478R]-[T478K] 

BA.2.75.1      1231    648  52.6%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,D574V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,F486P,F490S] (consensus)
BA.2.75.1      1231     49   4.0%   4 +[K147E,W152R,F157L,I210V,V213G,G257S,D574V]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,F486P,F490S] 
BA.2.75.1      1231     39   3.2%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,D574V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BA.2.75.1      1231     15   1.2%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,D574V,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,F486P,F490S] 
BA.2.75.1      1231     15   1.2%   3 +[K147E,W152R,F157L,N185-,F186-,I210V,V213G,G257S,R346I,D574V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,F486P,F490S] 

BA.2.68        1227   1016  82.8%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.68        1227     25   2.0%   1 +[F157L,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.68        1227     22   1.8%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.68        1227     17   1.4%   2 +[V213G,G339D]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S,Q498R] 
BA.2.68        1227      9   0.7%   1 +[F157S,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.1.157      1225    684  55.8%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.157      1225    160  13.1%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.157      1225     67   5.5%   2 +[S691P]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.157      1225     63   5.1%   1 +[L585F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.157      1225     44   3.6%   1 +[V70A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.3           1219    731  60.0%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,T547I,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.3           1219    101   8.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T547I,A1020S]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.3           1219     65   5.3%   1 +[H69-,V70-,E180V,V213G,G339D,L452R,F486V,T547I,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.3           1219     34   2.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T547I,A1020S,C1250F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.3           1219     27   2.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T547I,A570S,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BF.5.1         1216   1050  86.3%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.5.1         1216     16   1.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,K854R,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.5.1         1216     16   1.3%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.5.1         1216     14   1.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A1020S,E1202Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.5.1         1216     13   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A653V,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.2.47      1214    944  77.8%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.47      1214     31   2.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.47      1214     30   2.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.47      1214     20   1.6%   1 +[H69-,V70-,W152L,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.47      1214      6   0.5%   2 +[H69-,V70-,V213G,G339D,L452R,V483A,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

BF.6           1212    985  81.3%   0 +[H69-,V70-,G181A,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.6           1212     17   1.4%   1 +[H69-,V70-,G181A,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.6           1212     16   1.3%   1 +[H69-,V70-,G181A,V213G,G339D,L452R,F486V,T732I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.6           1212     13   1.1%   1 +[H69-,V70-,G181A,V213G,G339D,L452R,F486V,R1107S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.6           1212     12   1.0%   1 +[H69-,V70-,G181A,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.4.6.4       1210    943  77.9%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.4.6.4       1210     37   3.1%   1 +[H69-,V70-,V213G,G339D,V445F,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.6.4       1210     11   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,N658S]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.6.4       1210     11   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,N658S,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.6.4       1210     11   0.9%   1 +[H69-,V70-,V213G,A264T,G339D,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.147        1208   1061  87.8%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.147        1208     43   3.6%   1 +[S255F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.147        1208     23   1.9%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.147        1208      8   0.7%   1 +[W152R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.147        1208      6   0.5%   2 +[A694V,V1230L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

FU.2           1206    657  54.5%   0 +[E180V,T478R,T547I]-[T478K] (consensus)
FU.2           1206     62   5.1%   1 +[E180V,T478R,T547I,E554K]-[T478K] 
FU.2           1206     48   4.0%   1 +[H146K,E180V,T478R,T547I]-[H146Q,T478K] 
FU.2           1206     33   2.7%   2 +[E180V,T478R,T547I,A668S,A845S]-[T478K] 
FU.2           1206     19   1.6%   1 +[E180V,V445S,T478R,T547I]-[V445P,T478K] 

B.1.177.77     1203    807  67.1%   0 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.77     1203    223  18.5%   1 +[A222V,A1020S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.77     1203     26   2.2%   1 +[S98F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.77     1203     15   1.2%   1 +[A222V,H1101Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.77     1203     14   1.2%   2 +[G72E,A222V,A1020S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.67          1200    567  47.2%   0 +[T19R,E156G,F157-,R158-,A222V,A262S,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.67          1200    182  15.2%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.67          1200    110   9.2%   1 +[T19R,E156G,F157-,R158-,A222V,A262S,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.67          1200     67   5.6%   2 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.67          1200     41   3.4%   2 +[T19R,E156G,F157-,R158-,A222V,A348S,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

C.35           1200    816  68.0%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
C.35           1200     48   4.0%   1 +[G72R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
C.35           1200     22   1.8%   1 +[T29I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
C.35           1200     19   1.6%   1 +[T22I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
C.35           1200     19   1.6%   2 +[G769R,D1084G]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.241        1199    561  46.8%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.241        1199     85   7.1%   1 +[V90F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.241        1199     62   5.2%   1 +[Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.241        1199     56   4.7%   3 +[V6I,D138Y,I197V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.241        1199     51   4.3%   2 +[Q677H,V1128I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.396        1195    862  72.1%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.396        1195     40   3.3%   1 +[Y612F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.396        1195     31   2.6%   1 +[S98F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.396        1195     16   1.3%   1 +[E1262D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.396        1195     14   1.2%   1 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.177.87     1194    632  52.9%   0 +[A222V,A262S,P272L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.87     1194    171  14.3%   1 +[A222V,A262S,P272L,A1020S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.87     1194    102   8.5%   1 +[T19K,A222V,A262S,P272L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.87     1194     54   4.5%   1 +[L5F,A222V,A262S,P272L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.87     1194     44   3.7%   2 +[L176F,A222V,A262S,P272L,A1020S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.177.16     1192   1045  87.7%   0 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.16     1192     17   1.4%   1 +[A27V,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.16     1192     16   1.3%   1 +[A222V,S659L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.16     1192     12   1.0%   1 +[M153T,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.16     1192      8   0.7%   1 +[L5F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.1.15.2      1188    910  76.6%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,V320I,G339D,S371L,Q493R,G496S,T547K,Q628K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.15.2      1188     30   2.5%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,V320I,G339D,S371L,Q493R,G496S,T547K,Q628K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.15.2      1188     19   1.6%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,V320I,G339D,S371L,Q493R,G496S,T547K,Q628K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.1.15.2      1188     17   1.4%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,Q628K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.15.2      1188     15   1.3%   4 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,V320I,G339D,S371L,Q493R,G496S,T547K,Q628K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,F486P,F490S,N764K] 

BQ.1.1.6       1186    712  60.0%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.6       1186    162  13.7%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.6       1186     50   4.2%   1 +[H69-,V70-,G184V,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.6       1186     34   2.9%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,K1154R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.6       1186     28   2.4%   1 +[H69-,V70-,V213G,T307I,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

XBB.2          1181    721  61.0%   0 +[D253G,F486S]-[G252V,F486P] (consensus)
XBB.2          1181     19   1.6%   1 +[H146K,D253G,F486S]-[H146Q,G252V,F486P] 
XBB.2          1181     15   1.3%   1 +[D253G,F486S]-[Y144-,G252V,F486P] 
XBB.2          1181     11   0.9%   1 +[D253G,F486S]-[G252V,K417N,F486P] 
XBB.2          1181     11   0.9%   1 +[D253G,F486S]-[G252V,R408S,F486P] 

BA.2.3.6       1179   1076  91.3%   0 +[V213G,S255F,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.3.6       1179     17   1.4%   1 +[V213G,S255F,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.6       1179      6   0.5%   1 +[L5F,V213G,S255F,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.6       1179      6   0.5%   1 +[F2L,V213G,S255F,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.6       1179      5   0.4%   1 +[V213G,S255F,G339D,Q493R,P1263L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.36.1        1178    758  64.3%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,V1104L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.36.1        1178    165  14.0%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,V1104L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.36.1        1178     37   3.1%   1 +[T19R,F92I,T95I,E156G,F157-,R158-,L452R,P681R,D950N,V1104L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.36.1        1178     12   1.0%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,V1104L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.36.1        1178     12   1.0%   2 +[T19R,F92I,T95I,E156G,F157-,R158-,L452R,P681R,D950N,V1104L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.564        1178    481  40.8%   0 +[E780Q]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.564        1178    356  30.2%   2 +[H49Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.564        1178    132  11.2%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.564        1178     55   4.7%   1 +[A522S,E780Q]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.564        1178     50   4.2%   1 +[E780Q,T859I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.4.1.6       1175   1024  87.1%   0 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.4.1.6       1175     20   1.7%   1 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.4.1.6       1175     20   1.7%   1 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V,P1079S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.1.6       1175     15   1.3%   1 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.4.1.6       1175      8   0.7%   1 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V,A958S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.2.14        1173    866  73.8%   0 +[W64L,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.14        1173    190  16.2%   4 +[W64L,V213G,G339D,Q493R]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.14        1173     20   1.7%   1 +[W64L,V213G,G339D,N450D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.14        1173     10   0.9%   1 +[W64L,V213G,G339D,Q493R,V534L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.14        1173      9   0.8%   1 +[W64L,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

AY.46.2        1171    324  27.7%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.46.2        1171    200  17.1%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46.2        1171     76   6.5%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,P809S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46.2        1171     71   6.1%   2 +[T19R,E156G,F157-,R158-,L452R,P681R,P809S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46.2        1171     51   4.4%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5.4      1166    795  68.2%   0 +[T883I] (consensus)
XBB.1.5.4      1166     22   1.9%   1 +[T883I]-[K417N] 
XBB.1.5.4      1166     18   1.5%   1 +[S704L,T883I] 
XBB.1.5.4      1166     17   1.5%   1 +[N164S,T883I] 
XBB.1.5.4      1166     15   1.3%   3 +[M177I,N185D,T478R,T883I]-[T478K] 

B.1.177.73     1166    653  56.0%   0 +[A222V,Q1071L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.73     1166    177  15.2%   1 +[L5F,A222V,Q1071L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.73     1166     72   6.2%   1 +[S98F,A222V,Q1071L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.73     1166     43   3.7%   1 +[T95I,A222V,Q1071L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.73     1166     13   1.1%   2 +[S98F,D215Y,A222V,Q1071L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.34.2        1163    617  53.1%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R,T859I,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.34.2        1163    315  27.1%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R,T859I,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.34.2        1163     21   1.8%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R,T859I,D950N,D1259H]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.34.2        1163     16   1.4%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R,T859I,D950N,A1020S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.34.2        1163     14   1.2%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q677H,P681R,T859I,D950N,M1237I]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.617        1161    403  34.7%   0 +[E154K,L452R,E484Q,P681R,Q1071H,H1101D]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.617        1161    109   9.4%   3 +[E154K,V382L,L452R,E484Q,P681R,Q1071H,D1153Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.617        1161     98   8.4%   1 +[E154K,Q218H,L452R,E484Q,P681R,Q1071H,H1101D]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.617        1161     50   4.3%   1 +[E154K,L452R,E484Q,P681R,Q1071H,H1101Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.617        1161     49   4.2%   1 +[L452R,E484Q,P681R,Q1071H,H1101D]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

CK.1           1157    601  51.9%   0 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
CK.1           1157    111   9.6%   1 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
CK.1           1157     47   4.1%   1 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,F486P,F490S] 
CK.1           1157     31   2.7%   1 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V,Q613H]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
CK.1           1157     20   1.7%   1 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V,D1118V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

B.1.139        1157    814  70.4%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.139        1157     80   6.9%   2 +[T941A,M1229L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.139        1157     37   3.2%   1 +[A520S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.139        1157     33   2.9%   1 +[G252D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.139        1157     22   1.9%   1 +[T618I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.32        1156    874  75.6%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.32        1156     85   7.4%   1 +[W64R,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.32        1156     51   4.4%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.32        1156     14   1.2%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.2.32        1156      6   0.5%   2 +[V213G,G339D,Q493R]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

GK.1           1155    405  35.1%   0 +[L455F,F456L,S704L] (consensus)
GK.1           1155    115  10.0%   2 +[L455F,F456L,A475V,E554K,S704L] 
GK.1           1155     56   4.8%   2 +[N185D,L455F,F456L,A475V,S704L] 
GK.1           1155     51   4.4%   1 +[L455F,F456L,A475V,S704L] 
GK.1           1155     50   4.3%   1 +[F186L,L455F,F456L,S704L] 

XBB            1155    503  43.5%   0 +[F486S]-[G252V,F486P] (consensus)
XBB            1155     20   1.7%   1 +[H146K,F486S]-[H146Q,G252V,F486P] 
XBB            1155     18   1.6%   1 +[F486S]-[G252V,K417N,F486P] 
XBB            1155     16   1.4%   1 +[F486S]-[T19I,G252V,F486P] 
XBB            1155     15   1.3%   5 +[F486S]-[L24-,P25-,P26-,A27S,Y144-,G252V,F486P] 

AY.109         1154    431  37.3%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.109         1154    143  12.4%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.109         1154    139  12.0%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,H1058Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.109         1154     83   7.2%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,E484K,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.109         1154     66   5.7%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,S698L,D950N,H1058Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

FL.10.1        1150    824  71.7%   0 +[E554K] (consensus)
FL.10.1        1150     24   2.1%   1 +[H146K,E554K]-[H146Q] 
FL.10.1        1150     13   1.1%   1 +[E554K,D936Y] 
FL.10.1        1150     12   1.0%   1 +[E554K,F1075L] 
FL.10.1        1150     11   1.0%   1 +[E554K,A1070S] 

B.1.1.50       1150    324  28.2%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.50       1150     87   7.6%   1 +[N481K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.50       1150     66   5.7%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.1.50       1150     58   5.0%   2 -[T19I,L24-,P25-,P26-,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.1.50       1150     47   4.1%   2 +[A67S,E96Q]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BE.1.2         1150    726  63.1%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BE.1.2         1150     57   5.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T547K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.1.2         1150     28   2.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BE.1.2         1150     18   1.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A653V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.1.2         1150     15   1.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,D936N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.4.15        1147    936  81.6%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,A1078S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4.15        1147    119  10.4%   1 +[V16F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,A1078S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.15        1147     35   3.1%   1 +[T19R,T95I,E156G,F157-,R158-,S161F,L452R,P681R,D950N,A1078S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.15        1147      5   0.4%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,A1078S,Q1208H]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.15        1147      5   0.4%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,A1078S,T1238A]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.1.31      1147    616  53.7%   0 +[H69-,V70-,V213G,S256L,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.31      1147    265  23.1%   1 +[H69-,V70-,V213G,S256L,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.31      1147     20   1.7%   1 +[H69-,V70-,V213G,S256L,G339D,K444T,L452R,F486V,I1232S]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.31      1147     19   1.7%   1 +[H69-,V70-,V213G,S256L,G339D,K444T,L452R,V483I,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.31      1147     14   1.2%   2 +[H69-,V70-,V213G,S256L,G339D,K444T,L452R,F486V,E1144Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

XBB.1.5.12     1144    524  45.8%   0 +[T323I] (consensus)
XBB.1.5.12     1144    174  15.2%   1  
XBB.1.5.12     1144     30   2.6%   1 +[T323I]-[K417N] 
XBB.1.5.12     1144     17   1.5%   1 +[H146K,T323I]-[H146Q] 
XBB.1.5.12     1144     12   1.0%   3 -[R408S,S477N] 

BA.5.10        1144    816  71.3%   0 +[H69-,V70-,V213G,A262S,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.10        1144     74   6.5%   1 +[H69-,V70-,V213G,A262S,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.10        1144     21   1.8%   1 +[H69-,V70-,V213G,A262S,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.10        1144     12   1.0%   1 +[H69-,V70-,V213G,A262S,G339D,L452R,F486V,E654K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.10        1144     11   1.0%   1 +[H69-,V70-,Y200C,V213G,A262S,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.46.1        1143    787  68.9%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.46.1        1143     82   7.2%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46.1        1143     73   6.4%   1 +[L5F,T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46.1        1143     25   2.2%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,D1127Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.46.1        1143     16   1.4%   1 +[T19R,P85L,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.4.7         1143    931  81.5%   0 +[H69-,V70-,V213G,G339D,R346S,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.4.7         1143     19   1.7%   1 +[H69-,V70-,V213G,G339D,R346S,L452R,F486V,N658S,D1163N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.7         1143     17   1.5%   1 +[H69-,V70-,V213G,G339D,R346S,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.4.7         1143     15   1.3%   1 +[L5F,H69-,V70-,V213G,G339D,R346S,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.7         1143     15   1.3%   1 +[H69-,V70-,V213G,G339D,R346S,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

BE.2           1142    870  76.2%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BE.2           1142     40   3.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BE.2           1142     26   2.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.2           1142     18   1.6%   1 +[H69-,V70-,L176F,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.2           1142      9   0.8%   1 +[H69-,V70-,V213G,T240I,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.2.26        1137    996  87.6%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.26        1137     34   3.0%   1 +[V213G,G339D,Q493R,G1267R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.26        1137      9   0.8%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.26        1137      9   0.8%   1 +[V213G,G339D,Q493R,C1236F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.26        1137      7   0.6%   1 +[L5F,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.1.277      1132    505  44.6%   0 +[A626S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.277      1132    181  16.0%   1 +[A626S,E654Q]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.277      1132    122  10.8%   1 +[A626S,E1195Q]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.277      1132     97   8.6%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.277      1132     36   3.2%   1 +[H49Y,A626S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.2.8       1131    960  84.9%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.8       1131     18   1.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.8       1131     17   1.5%   1 +[H69-,V70-,E180G,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.8       1131     15   1.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.8       1131      7   0.6%   1 +[F59S,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.221.3      1130    872  77.2%   0 +[S98F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.221.3      1130     70   6.2%   1 +[H49Y,S98F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.221.3      1130     64   5.7%   1 +[S98F,V1065L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.221.3      1130     51   4.5%   1 +[S98F,A846V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.221.3      1130     24   2.1%   1 +[S98F,S494P]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

FL.15          1125    610  54.2%   0 +[F456L] (consensus)
FL.15          1125     79   7.0%   1 +[Q14H,F456L] 
FL.15          1125     38   3.4%   1 +[F456L,R1014K] 
FL.15          1125     18   1.6%   2 +[H146K,I197V,F456L]-[H146Q] 
FL.15          1125     17   1.5%   1 +[F456L]-[K417N] 

B.1.1.348      1124    449  39.9%   0 +[G1167A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.348      1124    133  11.8%   1 +[A879S,G1167A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.348      1124     73   6.5%   2 +[R346K,G1167A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.348      1124     68   6.0%   1 +[V289I,G1167A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.348      1124     51   4.5%   1 +[A348S,G1167A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.15        1118    858  76.7%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.15        1118     43   3.8%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.15        1118     36   3.2%   2 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,S1252Y]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.15        1118     18   1.6%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,F486P,F490S] 
BQ.1.15        1118     12   1.1%   2 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,Q675K]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

DV.1.1         1117    824  73.8%   0 +[K147E,W152R,F157L,L176F,N185D,I210V,V213G,G257S,K444T,L452R,F486S,Q613H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
DV.1.1         1117     31   2.8%   1 +[K147E,W152R,F157L,L176F,L179P,N185D,I210V,V213G,G257S,K444T,L452R,F486S,Q613H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
DV.1.1         1117     22   2.0%   1 +[K147E,W152R,F157L,L176F,N185D,I210V,V213G,G257S,K444T,L452R,F486S,Q613H,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
DV.1.1         1117     17   1.5%   2 +[K147E,W152R,F157L,L176F,N185D,I210V,V213G,G257S,A344T,K444T,L452R,F486S,A522S,Q613H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
DV.1.1         1117     14   1.3%   1 +[N30S,K147E,W152R,F157L,L176F,N185D,I210V,V213G,G257S,K444T,L452R,F486S,Q613H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

EG.5.1.8       1115    651  58.4%   0 +[Q52H,L455F,F456L] (consensus)
EG.5.1.8       1115     49   4.4%   1 +[Q52H,T95I,L455F,F456L] 
EG.5.1.8       1115     38   3.4%   1 +[Q52H,H146K,L455F,F456L]-[H146Q] 
EG.5.1.8       1115     33   3.0%   1 +[Q52H,L455F,F456L,E654V] 
EG.5.1.8       1115     18   1.6%   2 +[Q52H,H146K,L455F,F456L,E654V]-[H146Q] 

XBB.1.5.18     1115    736  66.0%   0  (consensus)
XBB.1.5.18     1115     47   4.2%   2 +[W152R,T478R]-[T478K] 
XBB.1.5.18     1115     19   1.7%   2 +[F456L,Q675K] 
XBB.1.5.18     1115     15   1.3%   1 +[H146K]-[H146Q] 
XBB.1.5.18     1115     15   1.3%   4 +[W152R,T478R,E554Q,D1184Y]-[T478K] 

B.1.1.416      1102    798  72.4%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.416      1102     24   2.2%   1 +[T95I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.416      1102     21   1.9%   1 +[P330S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.416      1102     14   1.3%   1 +[T1117I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.416      1102     13   1.2%   2 +[E156D,T747I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.2.3.11     1100    526  47.8%   0 +[D253G,T478R,P521S]-[G252V,T478K] (consensus)
XBB.2.3.11     1100     77   7.0%   1 +[N185D,D253G,T478R,P521S]-[G252V,T478K] 
XBB.2.3.11     1100     42   3.8%   1 +[D253G,T478R,P521S,T883I]-[G252V,T478K] 
XBB.2.3.11     1100     41   3.7%   1 +[D253G,T478R,P521S,A845S]-[G252V,T478K] 
XBB.2.3.11     1100     20   1.8%   1 +[L216F,D253G,T478R,P521S]-[G252V,T478K] 

BL.1           1091    700  64.2%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,D574V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
BL.1           1091     24   2.2%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,D574V,S680F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BL.1           1091     22   2.0%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,D574V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,R408S,V445P,F486P,F490S] 
BL.1           1091     18   1.6%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,D574V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BL.1           1091     14   1.3%   4 +[K147E,W152R,F157L,I210V,V213G,G257S,D574V]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

B.1.409        1089    879  80.7%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.409        1089     27   2.5%   1 +[A520S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.409        1089     13   1.2%   1 +[D80Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.409        1089     12   1.1%   1 +[H1088R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.409        1089     10   0.9%   1 +[T29I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

CH.1.1.11      1087    755  69.5%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
CH.1.1.11      1087     39   3.6%   1 +[K147E,W152R,F157L,N185D,I210V,V213G,G257S,K444T,L452R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1.11      1087     23   2.1%   2 +[K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S,T883I,S939F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1.11      1087     15   1.4%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,P322A,K444T,L452R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1.11      1087     10   0.9%   2 +[K147E,W152R,F157L,I210V,L212S,V213G,G257S,R408N,K444T,L452R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,R408S,V445P,F486P,F490S] 

B.1.177.56     1082    813  75.1%   0 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.56     1082     84   7.8%   1 +[A222V,P809L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.56     1082     25   2.3%   1 +[D138H,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.56     1082     22   2.0%   1 +[A222V,S255F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.56     1082     16   1.5%   1 +[I119V,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.426        1081    841  77.8%   0 +[D253G]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.426        1081     38   3.5%   1 +[D253G,T719I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.426        1081     26   2.4%   2 +[D253G,A263T,V1228L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.426        1081     24   2.2%   1 +[H49Y,D253G]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.426        1081     19   1.8%   1 +[L5F,D253G]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.329        1080   1052  97.4%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.329        1080      3   0.3%   1 +[A163V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.329        1080      3   0.3%   1 +[N17D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.329        1080      2   0.2%   1 +[L849F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.329        1080      2   0.2%   1 +[H69Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.1.52      1077    550  51.1%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.52      1077    226  21.0%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.52      1077     61   5.7%   2 +[H69-,V70-,V213G,H245Y,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.52      1077     15   1.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,T732I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.52      1077     15   1.4%   1 +[H69-,V70-,V213G,G339D,K417T,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,K417N,V445P,G446S,F486P,F490S] 

AY.99.1        1075    443  41.2%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.99.1        1075    226  21.0%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.99.1        1075     42   3.9%   1 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.99.1        1075     29   2.7%   2 +[T19R,E156G,F157-,R158-,D427G,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.99.1        1075     19   1.8%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

P.1.17.1       1073   1011  94.2%   0 +[L18F,T20N,P26S,H49Y,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
P.1.17.1       1073     12   1.1%   1 +[L18F,T20N,P26S,H49Y,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.17.1       1073      6   0.6%   1 +[L18F,T20N,P26S,H49Y,D138Y,R190S,K417T,E484K,A879S,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.17.1       1073      5   0.5%   1 +[L18F,T20N,P26S,H49Y,D138Y,R190S,K417T,E484K,T523N,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.17.1       1073      5   0.5%   1 +[V3A,L18F,T20N,P26S,H49Y,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.7.23        1073    872  81.3%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.7.23        1073     31   2.9%   1 +[V3I,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.23        1073     23   2.1%   1 +[T19L,H69-,V70-,V213G,G339D,L452R,F486V]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.23        1073     18   1.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.23        1073     10   0.9%   2 +[H69-,V70-,V213G,T323I,G339D,L452R,F486V,A688V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.2.44      1071    614  57.3%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.44      1071    101   9.4%   2 +[H69-,V70-,N185D,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.44      1071     46   4.3%   3 +[H69-,V70-,N185D,V213G,G339D,L452R,F486V,D1139H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.44      1071     37   3.5%   1 +[T19L,H69-,V70-,V213G,G339D,L452R,F486V]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.44      1071     31   2.9%   1 +[H69-,V70-,V213G,G339D,N450D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

XBB.1.5.35     1063    449  42.2%   0 +[N978S] (consensus)
XBB.1.5.35     1063    174  16.4%   1 +[S98F,N978S] 
XBB.1.5.35     1063     72   6.8%   1 +[D198G,N978S] 
XBB.1.5.35     1063     50   4.7%   1 +[N978S]-[K417N] 
XBB.1.5.35     1063     18   1.7%   1 +[H146K,N978S]-[H146Q] 

HH.1           1062    793  74.7%   0 +[G184V,D253G,P521S]-[G252V] (consensus)
HH.1           1062     28   2.6%   1 +[H146K,G184V,D253G,P521S]-[H146Q,G252V] 
HH.1           1062     17   1.6%   1 +[G184V,D253G,Q493L,P521S]-[G252V] 
HH.1           1062     11   1.0%   1 +[G184V,D253G,P521S]-[G252V,K417N] 
HH.1           1062      7   0.7%   1 +[G184V,D253G,P521S]-[Y144-,G252V] 

XBB.1.5.77     1060    578  54.5%   0  (consensus)
XBB.1.5.77     1060     38   3.6%   1 +[H146K]-[H146Q] 
XBB.1.5.77     1060     15   1.4%   2 +[L84I,T588I] 
XBB.1.5.77     1060     13   1.2%   1 -[R408S] 
XBB.1.5.77     1060     13   1.2%   1 -[K417N] 

BF.7.24        1058    708  66.9%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.7.24        1058     58   5.5%   1 +[T19L,H69-,V70-,V213G,G339D,L452R,F486V]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.24        1058     48   4.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,L1197F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.24        1058     16   1.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,S691P]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.24        1058     14   1.3%   2 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

CQ.2           1055    916  86.8%   0 +[H69-,V70-,P209L,V213G,G339D,K444R,V445A,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
CQ.2           1055     18   1.7%   1 +[H69-,V70-,P209L,V213G,G339D,K444R,V445A,L452R,F486A]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
CQ.2           1055     15   1.4%   1 +[H69-,V70-,P209L,V213G,G339D,K444R,V445A,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
CQ.2           1055     10   0.9%   1 +[H69-,V70-,P209L,V213G,G339D,K444R,V445A,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,K417N,V445P,G446S,N460K,F486P,F490S] 
CQ.2           1055      7   0.7%   1 +[H69-,V70-,P209L,V213G,G339D,K444R,V445A,L452R,F486V,S940F]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.43.2        1053    597  56.7%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.43.2        1053    179  17.0%   1 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.2        1053    106  10.1%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.2        1053     16   1.5%   1 +[T19R,E156G,F157-,R158-,L452R,E471Q,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.2        1053      8   0.8%   1 +[T19R,E156G,F157-,R158-,L452R,S477I,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.1.10        1052    916  87.1%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.10        1052     18   1.7%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.10        1052     10   1.0%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.10        1052      9   0.9%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,S691P,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.10        1052      8   0.8%   2 +[A67V,H69-,V70-,T95I,V143-,Y145-,M177I,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F,D1163G]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

B.1.177.15     1050    831  79.1%   0 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.15     1050     38   3.6%   1 +[S12F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.15     1050     31   3.0%   1 +[A222V,T859I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.15     1050     23   2.2%   1 +[A222V,A845S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.15     1050     21   2.0%   1 +[A222V,G1167F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AZ.2           1048    827  78.9%   0 +[T95I,E484K,D796H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] (consensus)
AZ.2           1048     36   3.4%   1 +[T95I,G252S,E484K,D796H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
AZ.2           1048     19   1.8%   2 +[T95I,E484K,Q607K,D796H,S875A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
AZ.2           1048     19   1.8%   1 +[L5F,T95I,E484K,D796H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
AZ.2           1048     10   1.0%   2 +[T95I,G252S,E484K,S640F,D796H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

B.1.509        1047    847  80.9%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.509        1047     23   2.2%   2 +[D215Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.509        1047     14   1.3%   1 +[S98F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.509        1047     11   1.1%   1 +[T22I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.509        1047     10   1.0%   1 +[T76I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.2.1       1043    791  75.8%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,I666V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.2.1       1043     72   6.9%   1 +[L5F,H69-,V70-,V213G,G339D,K444T,L452R,F486V,I666V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.2.1       1043     17   1.6%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,I666V,D1139H]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.2.1       1043     11   1.1%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,I666V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,F486P,F490S] 
BQ.1.2.1       1043      7   0.7%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,I666V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,F486P,F490S] 

XBB.1.5.11     1042    665  63.8%   0  (consensus)
XBB.1.5.11     1042     35   3.4%   1 +[H146K]-[H146Q] 
XBB.1.5.11     1042     20   1.9%   1 +[S704L] 
XBB.1.5.11     1042     19   1.8%   1 +[T883I] 
XBB.1.5.11     1042     13   1.2%   1 -[K417N] 

B.1.1.372      1040    704  67.7%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.372      1040    192  18.5%   1 +[P26L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.372      1040      9   0.9%   2 +[P26L,T29I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.372      1040      7   0.7%   2 +[P26L,L54F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.372      1040      7   0.7%   1 +[T323I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

GF.1           1036    769  74.2%   0 +[E748V] (consensus)
GF.1           1036     30   2.9%   1 +[H146K,E748V]-[H146Q] 
GF.1           1036     26   2.5%   1 +[R408G,E748V]-[R408S] 
GF.1           1036     10   1.0%   1 +[E748V]-[K417N] 
GF.1           1036      8   0.8%   2 +[E748V]-[R408S,S477N] 

XBC.1.3        1035    709  68.5%   0 +[P25S,E156G,F157-,R158-,P209L,L212S,D215H,A222V,A243-,L244-,S256L,L452M,N703I]-[L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,N460K,F490S] (consensus)
XBC.1.3        1035     31   3.0%   1 +[P25S,E156G,F157-,R158-,Y170H,P209L,L212S,D215H,A222V,A243-,L244-,S256L,L452M,N703I]-[L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,N460K,F490S] 
XBC.1.3        1035     22   2.1%   1 +[P25S,E156G,F157-,R158-,P209L,L212S,D215H,A222V,A243-,L244-,L452M,N703I]-[L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,N460K,F490S] 
XBC.1.3        1035     14   1.4%   1 +[P25S,E156G,F157-,R158-,P209L,L212S,D215H,A222V,A243-,L244-,S256L,K444T,L452M,N703I]-[L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,N460K,F490S] 
XBC.1.3        1035     13   1.3%   1 +[P25S,E156G,F157-,R158-,P209L,L212S,D215H,A222V,A243-,L244-,S256L,R346S,L452M,N703I]-[L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,N460K,F490S] 

B.1.177.8      1029    807  78.4%   0 +[L18F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.8      1029    134  13.0%   1 +[L18F,A222V,I794L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.8      1029      5   0.5%   2 +[L18F,A222V,I794L,G1085R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.8      1029      5   0.5%   1 +[L18F,A222V,T1027I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.8      1029      4   0.4%   1 +[L18F,A222V,S373L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.42        1028    874  85.0%   0 +[I68T,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.42        1028     28   2.7%   1 +[I68T,R78G,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.42        1028     17   1.7%   1 +[I68T,V213G,G339D,Q493R,M1229I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.42        1028     12   1.2%   1 +[I68T,V213G,G339D,Q493R,P1162S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.42        1028      7   0.7%   1 +[I68T,V213G,G339D,Q493R,T778A]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

EU.1.1         1025    771  75.2%   0 +[I410V,P521S] (consensus)
EU.1.1         1025     20   2.0%   1 +[I410V,S494P,P521S] 
EU.1.1         1025     18   1.8%   1 +[I410V,P521S]-[K417N] 
EU.1.1         1025     17   1.7%   1 +[H146K,I410V,P521S]-[H146Q] 
EU.1.1         1025     15   1.5%   1 +[Q14K,I410V,P521S] 

P.1.4          1024    870  85.0%   0 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,P681H,N764K,D796Y,Q954H,N969K] (consensus)
P.1.4          1024     24   2.3%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,R646H,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,P681H,N764K,D796Y,Q954H,N969K] 
P.1.4          1024      9   0.9%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,V622F,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,P681H,N764K,D796Y,Q954H,N969K] 
P.1.4          1024      9   0.9%   1 +[L18F,T20N,P26S,D138Y,R190S,G257D,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,P681H,N764K,D796Y,Q954H,N969K] 
P.1.4          1024      8   0.8%   2 +[L18F,T20N,P26S,D138Y,R190S,A243-,L244-,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.49        1023    486  47.5%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.49        1023    326  31.9%   1 +[L212S,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.49        1023     48   4.7%   1 +[V213G,G339D,Q493R,T732I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.49        1023     22   2.2%   2 +[L212S,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.49        1023     17   1.7%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

AY.50          1021    934  91.5%   0 +[T19R,E156G,F157-,R158-,V308L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.50          1021     20   2.0%   1 +[T19R,E156G,F157-,R158-,V308L,L452R,P681R,D950N,V1228I]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.50          1021     17   1.7%   1 +[T19R,E156G,F157-,R158-,V308L,L452R,P681R,D950N,G1124V]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.50          1021      9   0.9%   1 +[T19R,E156G,F157-,R158-,V308L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.50          1021      3   0.3%   1 +[T19R,E156G,F157-,R158-,T250I,V308L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5.51     1021    709  69.4%   0  (consensus)
XBB.1.5.51     1021     68   6.7%   1 +[T478R]-[T478K] 
XBB.1.5.51     1021     23   2.3%   1 +[T29I] 
XBB.1.5.51     1021     21   2.1%   1 +[H146K]-[H146Q] 
XBB.1.5.51     1021     12   1.2%   1 -[K417N] 

BF.7.19.1      1021    885  86.7%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.7.19.1      1021     25   2.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.19.1      1021     18   1.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,V1104L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.19.1      1021     10   1.0%   1 +[H69-,V70-,V213G,L244S,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.19.1      1021      6   0.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,S813I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.2.3.15      1019    673  66.0%   0 +[V213G,D215E,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.3.15      1019    113  11.1%   1 +[V213G,D215E,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.15      1019     45   4.4%   1 +[V213G,D215E,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.15      1019     24   2.4%   2 +[V213G,D215E,G339D,Q493R]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.15      1019     20   2.0%   1 +[F157S,V213G,D215E,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.102         1017    496  48.8%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.102         1017    107  10.5%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.102         1017     54   5.3%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,Q613H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.102         1017     33   3.2%   1 +[T19R,T95I,E156G,F157-,R158-,M177I,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.102         1017     27   2.7%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D936Y,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.7.22        1011    790  78.1%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.7.22        1011     20   2.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.7.22        1011     11   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,I1183V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.22        1011     10   1.0%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.22        1011      9   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S,P681H] 

BA.2.3.12      1010    837  82.9%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.3.12      1010     14   1.4%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.12      1010     11   1.1%   2 +[V213G,G339D]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S,Q498R] 
BA.2.3.12      1010     10   1.0%   1 +[V213G,T286I,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.12      1010      9   0.9%   1 +[V213G,G339D,Q493R,I1225V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.588        1009    748  74.1%   0 +[T20I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.588        1009     28   2.8%   1 +[T20I,A626V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.588        1009     27   2.7%   1 +[T20I,I68L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.588        1009     24   2.4%   1 +[T20I,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.588        1009     15   1.5%   1 +[T20I,P812S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBC.1.6        1005    699  69.6%   0 +[P25S,E156G,F157-,R158-,P209L,L212S,D215H,A222V,A243-,L244-,S256L,R346S,L452R,N703I]-[L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,N460K,F490S] (consensus)
XBC.1.6        1005     83   8.3%   1 +[P25S,E156G,F157-,R158-,P209L,L212S,D215H,A222V,A243-,L244-,S256L,R346S,V445A,L452R,N703I]-[L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,N460K,F490S] 
XBC.1.6        1005     50   5.0%   1 +[P25S,E156G,F157-,R158-,P209L,L212S,D215H,A222V,A243-,L244-,S256L,R346S,L452R,N703I,A899S]-[L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,N460K,F490S] 
XBC.1.6        1005     15   1.5%   1 +[P25S,E156G,F157-,R158-,G184V,P209L,L212S,D215H,A222V,A243-,L244-,S256L,R346S,L452R,N703I]-[L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,N460K,F490S] 
XBC.1.6        1005     12   1.2%   1 +[P25S,E156G,F157-,R158-,P209L,L212S,D215H,A222V,A243-,L244-,S256L,R346S,L452R,N703I,P812T]-[L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,N460K,F490S] 

B.1.177.65     1005    770  76.6%   0 +[L18F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.65     1005    169  16.8%   1 +[L18F,G181V,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.65     1005     19   1.9%   2 +[L18F,G75S,G181V,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.65     1005     12   1.2%   1 +[L5F,L18F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.65     1005      4   0.4%   1 +[L18F,A222V,S939F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.177.17     1003    579  57.7%   0 +[L176F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.17     1003    213  21.2%   1 +[L5F,L176F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.17     1003     58   5.8%   2 +[A222V,A846S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.17     1003     33   3.3%   2 +[L176F,A222V,A1078S,K1191N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.17     1003     23   2.3%   1 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.6.2       1003    778  77.6%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.6.2       1003     29   2.9%   2 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BA.5.6.2       1003     15   1.5%   2 +[H69-,V70-,N211-,L212I,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.6.2       1003     11   1.1%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.6.2       1003     10   1.0%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,C1247F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.73          1002    255  25.4%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.73          1002    247  24.7%   1 +[T19R,W152L,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.73          1002    179  17.9%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.73          1002     99   9.9%   1 +[T19R,E156G,F157-,R158-,I210V,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.73          1002     15   1.5%   2 +[T19R,E156G,F157-,R158-,I210V,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5.21     1001    649  64.8%   0  (consensus)
XBB.1.5.21     1001     27   2.7%   1 +[H146K]-[H146Q] 
XBB.1.5.21     1001     23   2.3%   2 -[R408S,S477N] 
XBB.1.5.21     1001     20   2.0%   1 -[N764K] 
XBB.1.5.21     1001     15   1.5%   1 +[A260S] 

BA.2.13.1       997    774  77.6%   0 +[V213G,G339D,L452M,Q493R,T941S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.13.1       997     57   5.7%   1 +[V213G,G339D,L452M,Q493R,A892V,T941S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.13.1       997     28   2.8%   1 +[V213G,P217S,G339D,L452M,Q493R,T941S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.13.1       997     23   2.3%   1 +[V213G,G339D,L452M,Q493R,P812L,T941S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.13.1       997      9   0.9%   1 +[L5F,V213G,G339D,L452M,Q493R,T941S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BQ.1.3          994    669  67.3%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E619Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.3          994     51   5.1%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E619Q,V1133A]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.3          994     44   4.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E619Q]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.3          994     14   1.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E619Q,T1120I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.3          994     12   1.2%   1 +[H69-,V70-,W152R,V213G,G339D,K444T,L452R,F486V,E619Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

B.1.422         988    871  88.2%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.422         988     27   2.7%   1 +[G184S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.422         988     17   1.7%   1 +[P384R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.422         988     10   1.0%   1 +[T1009S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.422         988      7   0.7%   1 +[G257S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

FL.3            986    751  76.2%   0  (consensus)
FL.3            986     32   3.2%   1 +[H1159R] 
FL.3            986     12   1.2%   1 -[K417N] 
FL.3            986     11   1.1%   1 +[H146K]-[H146Q] 
FL.3            986      8   0.8%   1 +[L5F] 

BA.2.52         982    647  65.9%   0 +[V213G,Y248S,+248GEN,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.52         982    137  14.0%   4 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.52         982     48   4.9%   1 +[V213G,Y248S,+248GEN,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.52         982      8   0.8%   5 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.52         982      8   0.8%   1 +[V213G,Y248S,+248GEN,G339D,Q493R,P1143L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

P.1.2           981    598  61.0%   0 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
P.1.2           981     61   6.2%   1 +[L18F,T20N,P26S,D138Y,R190S,A262S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.2           981     31   3.2%   1 +[L18F,T20N,P26S,D138Y,R190S,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.2           981     19   1.9%   1 +[L18F,T20N,P26S,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.2           981     17   1.7%   2 +[L18F,T20N,P26S,D138Y,R190S,A262S,K417T,E484K,Q675H,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5.67      972    687  70.7%   0  (consensus)
XBB.1.5.67      972     23   2.4%   1 +[H146K]-[H146Q] 
XBB.1.5.67      972     15   1.5%   1 +[G257S] 
XBB.1.5.67      972     14   1.4%   1 +[T573I] 
XBB.1.5.67      972     13   1.3%   1 +[V62L] 

BA.2.41         968    566  58.5%   0 +[+212T,+213GGG,G339D,Q493R,T1231S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.41         968    183  18.9%   5 +[V213G,G339D,Q493R,T1231S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.41         968     96   9.9%   6 +[V213G,G339D,Q493R,A942S,T1231S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.41         968     11   1.1%   1 +[+212T,+213GGG,G339D,Q493R,T1231S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.41         968     10   1.0%   1 +[+212T,+213GGG,G339D,Q493R,A688V,T1231S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.367         967    712  73.6%   0 +[D80Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.367         967    100  10.3%   1 +[D80Y,V90F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.367         967     33   3.4%   1 +[D80Y,D1118Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.367         967      9   0.9%   1 +[L5F,D80Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.367         967      6   0.6%   1 +[D80Y,I794V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.2.49       965    750  77.7%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,T883I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.49       965     13   1.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T883I,D1146Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.49       965     12   1.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T883I]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.49       965     10   1.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T883I,D936Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.49       965      8   0.8%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V,T883I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.48           964    365  37.9%   0 +[T19R,K77T,E156G,F157-,R158-,L452R,T547I,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.48           964    151  15.7%   1 +[T19R,K77T,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.48           964    102  10.6%   1 +[T19R,K77T,E156G,F157-,R158-,L452R,T547I,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.48           964     83   8.6%   1 +[T19R,K77T,E156G,F157-,R158-,L452R,T547I,V622A,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.48           964     49   5.1%   2 +[T19R,K77T,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.177.75      961    224  23.3%   0 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.75      961    168  17.5%   1 +[A222V,V1104L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.75      961    159  16.5%   1 +[A222V,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.75      961    107  11.1%   1 +[Y144F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.75      961     32   3.3%   1 +[A222V,M1237I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

FE.1.2          958    407  42.5%   0 +[F456L] (consensus)
FE.1.2          958    112  11.7%   1 +[F456L]-[R346T] 
FE.1.2          958     61   6.4%   2 +[F456L]-[R346T,K417N] 
FE.1.2          958     29   3.0%   1 +[H146K,F456L]-[H146Q] 
FE.1.2          958     15   1.6%   1 +[F456L]-[K417N] 

AY.122.3        957    899  93.9%   0 +[T19R,E156G,F157-,R158-,L452R,Q613H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.122.3        957      8   0.8%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,Q613H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122.3        957      7   0.7%   1 +[L5F,T19R,E156G,F157-,R158-,L452R,Q613H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122.3        957      3   0.3%   1 +[T19R,N30H,E156G,F157-,R158-,L452R,Q613H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122.3        957      3   0.3%   1 +[T19R,E156G,F157-,R158-,L452R,Q613H,P681R,A684V,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.1.216       956    523  54.7%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.216       956     23   2.4%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.1.216       956     17   1.8%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.216       956     16   1.7%   1 +[E484K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.216       956     15   1.6%   1 +[Q675H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BN.1.2.5        952    685  72.0%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
BN.1.2.5        952     59   6.2%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,A520S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.2.5        952     20   2.1%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,F565I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.2.5        952     15   1.6%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,L452R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.2.5        952     10   1.1%   1 +[L5F,K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 

CM.2            949    745  78.5%   0 +[M153T,N164K,V213G,H245N,G257D,G339D,K444R,N450D,L452M,E484R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,E484A,F486P,F490S] (consensus)
CM.2            949     13   1.4%   1 +[M153T,N164K,V213G,H245N,G257D,G339D,K444R,N450D,L452M,T478E,E484R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,T478K,E484A,F486P,F490S] 
CM.2            949     11   1.2%   1 +[M153T,N164K,V213G,H245N,G257D,G339D,K444R,N448D,N450D,L452M,E484R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,E484A,F486P,F490S] 
CM.2            949     10   1.1%   1 +[M153T,N164K,V213G,H245N,G257D,G339D,K444R,N450D,L452M,E484R,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,E484A,F486P,F490S] 
CM.2            949      7   0.7%   1 +[K150I,M153T,N164K,V213G,H245N,G257D,G339D,K444R,N450D,L452M,E484R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,E484A,F486P,F490S] 

CJ.1.3          946    730  77.2%   0 +[K147E,W152R,F157L,I210V,V213G,G257S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P] (consensus)
CJ.1.3          946     18   1.9%   1 +[R21T,K147E,W152R,F157L,I210V,V213G,G257S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P] 
CJ.1.3          946     12   1.3%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,T547K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P] 
CJ.1.3          946     10   1.1%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P] 
CJ.1.3          946      9   1.0%   1 +[K147E,W152R,F157L,D178H,I210V,V213G,G257S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P] 

B.1.1.420       943    334  35.4%   0 +[L18F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.420       943    175  18.6%   1 +[L18F,Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.420       943     72   7.6%   2 +[L18F,Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.420       943     47   5.0%   2 +[L18F,P26S,Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.420       943     46   4.9%   1 +[L18F,H49Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.1.21       937    657  70.1%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.21       937     27   2.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.21       937     19   2.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.21       937     15   1.6%   1 +[H69-,V70-,K182R,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.21       937     13   1.4%   2 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

AY.35           937    510  54.4%   0 +[T19R,K77T,E156G,F157-,R158-,L452R,E484Q,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.35           937    106  11.3%   1 +[T19R,K77T,E156G,F157-,R158-,L452R,E484Q,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.35           937     78   8.3%   1 +[L5F,T19R,K77T,E156G,F157-,R158-,L452R,E484Q,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.35           937     62   6.6%   1 +[T19R,K77T,E156G,F157-,R158-,L452R,E484Q,P681R,D808E,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.35           937     40   4.3%   2 +[L5F,T19R,K77T,E156G,F157-,R158-,L452R,E484Q,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.4.1          935    760  81.3%   0 +[T19R,T95I,E156G,F157-,R158-,G446V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4.1          935     60   6.4%   1 +[T19R,T95I,E156G,F157-,R158-,G446V,L452R,P681R,D950N,V1122L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.1          935     35   3.7%   1 +[T19R,T95I,E156G,F157-,R158-,G446V,L452R,P681R,D950N,I1221V]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.1          935      6   0.6%   1 +[T19R,T95I,E156G,F157-,R158-,G446V,L452R,P681R,D950N,N969S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.1          935      5   0.5%   1 +[T19R,T95I,E156G,F157-,R158-,G446V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.1.316       932    348  37.3%   0 +[Q677H,T732S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.316       932    301  32.3%   1 +[Q677H,T732S,E1202Q]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.316       932     48   5.2%   2 +[V213L,Q677H,T732S,E1202Q]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.316       932     28   3.0%   1 +[S94F,Q677H,T732S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.316       932     28   3.0%   1 +[T76I,Q677H,T732S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5.95      930    544  58.5%   0  (consensus)
XBB.1.5.95      930     30   3.2%   1 +[E725D] 
XBB.1.5.95      930     29   3.1%   1 -[K417N] 
XBB.1.5.95      930     20   2.2%   1 +[T51I] 
XBB.1.5.95      930     15   1.6%   1 +[L1265F] 

BG.2            930    847  91.1%   0 +[V213G,G339D,L452Q,Q493R,S704L,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BG.2            930      9   1.0%   1 +[V213G,G339D,L452Q,Q493R,S704L,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BG.2            930      7   0.8%   1 +[V213G,G339D,L452Q,Q493R,S704L,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BG.2            930      6   0.6%   1 +[L5F,V213G,G339D,L452Q,Q493R,S704L,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BG.2            930      5   0.5%   1 +[V213G,G339D,L452Q,Q493R,A522P,S704L,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.6.1        930    416  44.7%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.6.1        930    261  28.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.6.1        930     34   3.7%   2 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.6.1        930     19   2.0%   2 +[H69-,V70-,K147I,V213G,G339D,N450D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.5.6.1        930     18   1.9%   2 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

XBB.1.5.52      929    612  65.9%   0  (consensus)
XBB.1.5.52      929     32   3.4%   1 +[F456L] 
XBB.1.5.52      929     24   2.6%   2 +[L176F,T236S] 
XBB.1.5.52      929     18   1.9%   1 +[T236S] 
XBB.1.5.52      929     13   1.4%   1 +[H146K]-[H146Q] 

AY.43.3         929    507  54.6%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.43.3         929    170  18.3%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.3         929     42   4.5%   1 +[T19R,E156G,F157-,R158-,V367L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.3         929     25   2.7%   2 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.3         929     14   1.5%   3 +[V6F,T19R,E156G,F157-,R158-,L452R,P681R,D950N,D1041N,G1046D]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.9         920    258  28.0%   0 +[F486S]-[F486P] 
XBB.1.9         920    176  19.1%   1  (consensus)
XBB.1.9         920     29   3.2%   2 +[Q613H] 
XBB.1.9         920     28   3.0%   1 +[F486S,S813G]-[F486P] 
XBB.1.9         920     24   2.6%   3 +[L242I,V635I] 

XBB.1.5.59      915    526  57.5%   0 +[F456L] (consensus)
XBB.1.5.59      915     72   7.9%   1 +[H146K,F456L]-[H146Q] 
XBB.1.5.59      915     24   2.6%   1 +[M177I,F456L] 
XBB.1.5.59      915     22   2.4%   1 +[F456L,V510I] 
XBB.1.5.59      915     14   1.5%   1 +[F456L]-[K417N] 

XBB.1.5.73      912    626  68.6%   0  (consensus)
XBB.1.5.73      912     26   2.9%   1 +[F456L] 
XBB.1.5.73      912     19   2.1%   1 +[N1187S] 
XBB.1.5.73      912     11   1.2%   1 -[Q183E] 
XBB.1.5.73      912     10   1.1%   2 +[S514F,V687L] 

BA.2.47         908    715  78.7%   0 +[V213G,Y248H,G339D,Q493R,S1261Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.47         908     68   7.5%   2 +[V213G,Y248H,G339D,Q493R,A1020S,P1143S,S1261Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.47         908     57   6.3%   4 +[V213G,Y248H,G339D,Q493R,S1261Y]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.47         908     15   1.7%   1 +[V213G,Y248H,G339D,Q493R,S1261Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.47         908      6   0.7%   1 +[V213G,Y248H,G339D,Q493R,S1261Y]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

HK.6            906    589  65.0%   0 +[Q52H,D253G,F456L] (consensus)
HK.6            906     33   3.6%   1 +[Q52H,R78M,D253G,F456L] 
HK.6            906     19   2.1%   1 +[Q52H,D253G,F456L,V1268I] 
HK.6            906     14   1.5%   1 +[Q52H,D253G,F456L,Q675H] 
HK.6            906     11   1.2%   1 +[Q52H,D253G,F456L]-[E484A] 

FE.1.1          906    635  70.1%   0 +[F456L] (consensus)
FE.1.1          906     24   2.6%   1 +[H146K,F456L]-[H146Q] 
FE.1.1          906     10   1.1%   1 +[F456L,V1228A] 
FE.1.1          906      9   1.0%   1 +[F456L]-[R346T] 
FE.1.1          906      8   0.9%   1 +[L5F,F456L] 

BQ.1.1.24       905    637  70.4%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.24       905     78   8.6%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.24       905     61   6.7%   2 +[H69-,V70-,N185I,F186-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.24       905      6   0.7%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,T1117I]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.24       905      6   0.7%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,P479L,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

AY.122.4        905    482  53.3%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.122.4        905    213  23.5%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122.4        905     16   1.8%   2 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122.4        905     12   1.3%   2 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122.4        905     10   1.1%   3 +[T19R,H49Y,E156G,F157-,R158-,L452R,Q613H,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.122.6        904    578  63.9%   0 +[T19R,E156G,F157-,R158-,G181V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.122.6        904    155  17.1%   1 +[T19R,E156G,F157-,R158-,G181V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122.6        904     15   1.7%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122.6        904     11   1.2%   1 +[T19R,E156G,F157-,R158-,G181V,L452R,P681R,E780D,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.122.6        904     10   1.1%   1 +[T19R,E156G,F157-,R158-,G181V,L452R,P681R,D950N,D1259H]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.120.2.1      901    599  66.5%   0 +[T19R,H66Y,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.120.2.1      901    130  14.4%   1 +[T19R,H66Y,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.120.2.1      901     83   9.2%   1 +[T19R,H66Y,T95I,E156G,F157-,R158-,L452R,P681R,D950N,M1050I]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.120.2.1      901     12   1.3%   1 +[T19R,H66Y,T95I,E156G,F157-,R158-,L452R,A522S,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.120.2.1      901     10   1.1%   1 +[T19R,H66Y,T95I,E156G,F157-,R158-,L452R,P681R,S810A,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.72           900    448  49.8%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.72           900    187  20.8%   1 +[T19R,E156G,F157-,R158-,F201L,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.72           900     79   8.8%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.72           900     12   1.3%   2 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.72           900      9   1.0%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,V1122L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.126         899    689  76.6%   0 +[D215Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.126         899     37   4.1%   1 +[D215Y,A1078V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.126         899     31   3.4%   1 +[R78M,D215Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.126         899     29   3.2%   1 +[D215Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.126         899     13   1.4%   1 +[D215Y,A688V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.5.2        899    601  66.9%   0 +[H69-,V70-,T76I,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.5.2        899    101  11.2%   1 +[H69-,V70-,T76I,V213G,G339D,L452R,F486V,Q677H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.5.2        899     17   1.9%   1 +[H69-,V70-,T76I,V213G,G339D,L452R,F486V,P561S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.5.2        899     15   1.7%   1 +[H69-,V70-,T76I,V90L,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.5.2        899     11   1.2%   1 +[H69-,V70-,T76I,V213G,G339D,L452R,F486V,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.2.3.14       894    716  80.1%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.3.14       894     16   1.8%   2 +[V213G,G339D]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S,Q498R] 
BA.2.3.14       894     15   1.7%   1 +[V213G,G339D,Q493R,T1273I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.14       894     11   1.2%   1 +[L5F,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.14       894      9   1.0%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

AY.123          890    471  52.9%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,P1263L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.123          890    118  13.3%   1 +[T19R,T95I,E156G,F157-,R158-,A222V,L452R,P681R,D950N,P1263L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.123          890     70   7.9%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,P1263L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.123          890     35   3.9%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,Q1201H,P1263L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.123          890     19   2.1%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,P1162S,P1263L]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.389         890    771  86.6%   0 +[T723I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.389         890     16   1.8%   1 +[T723I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.389         890     14   1.6%   1 +[T723I,E1202D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.389         890      9   1.0%   1 +[W258L,T723I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.389         890      5   0.6%   1 +[I472V,T723I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.177.10      888    658  74.1%   0 +[A222V,A262S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.10      888     46   5.2%   1 +[A222V,A262S,P809S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.10      888     21   2.4%   2 +[Q52R,A222V,A262S,A688V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.10      888     16   1.8%   1 +[A222V,A262S,H1083Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.10      888     11   1.2%   2 +[A222V,S254P,A262S,P809S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5.63      886    602  67.9%   0  (consensus)
XBB.1.5.63      886     35   4.0%   1 +[K1205R] 
XBB.1.5.63      886     20   2.3%   1 -[T19I] 
XBB.1.5.63      886     15   1.7%   1 +[H146K]-[H146Q] 
XBB.1.5.63      886     15   1.7%   1 +[T299I] 

BA.5.7          885    767  86.7%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.7          885      9   1.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.7          885      7   0.8%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.7          885      6   0.7%   2 +[V6I,H69-,V70-,V213G,G339D,L452R,Y453F,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.7          885      4   0.5%   1 +[H69-,V70-,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BF.25           883    729  82.6%   0 +[H69-,V70-,V213G,G339D,V445A,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.25           883     19   2.2%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.25           883      7   0.8%   1 +[H69-,V70-,V213G,G339D,V445A,L452R,F486V,S704L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.25           883      6   0.7%   1 +[H69-,V70-,V213G,G339D,V445A,L452R,T478E,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,T478K,F486P,F490S] 
BF.25           883      6   0.7%   1 +[T19L,H69-,V70-,V213G,G339D,V445A,L452R,F486V]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

FK.1.1          881    658  74.7%   0 +[K147E,W152R,F157L,I210V,V213G,D215G,G257S,K444T,L452R,F486S,Q613H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
FK.1.1          881     22   2.5%   1 +[K147E,W152R,F157L,I210V,V213G,D215G,G257S,K444T,L452R,F486S,Q613H,D1139H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
FK.1.1          881     22   2.5%   1 +[K147E,W152R,F157L,I210V,V213G,D215G,G257S,K444T,L452R,F486S,Q613H,M1237I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
FK.1.1          881     15   1.7%   1 +[K147E,W152R,F157L,I210V,V213G,D215G,G257S,K444T,L452R,F486S,K558R,Q613H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
FK.1.1          881     14   1.6%   1 +[K147E,W152L,F157L,I210V,V213G,D215G,G257S,K444T,L452R,F486S,Q613H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

BA.5.2.25       881    629  71.4%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.25       881     65   7.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.25       881     21   2.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.25       881     15   1.7%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.25       881     14   1.6%   1 +[H69-,V70-,V213G,G339D,T430I,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

XBB.1.22.1      879    258  29.4%   0 +[Y200C,T572I] 
XBB.1.22.1      879    215  24.5%   1 +[Y200C] (consensus)
XBB.1.22.1      879     30   3.4%   1 +[A67S,Y200C,T572I] 
XBB.1.22.1      879     24   2.7%   2  
XBB.1.22.1      879     23   2.6%   2 +[Y200C,Q675K] 

AY.51           879    208  23.7%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.51           879    182  20.7%   2 +[T19R,E156G,F157-,R158-,L452R,A520S,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.51           879    171  19.5%   1 +[T19R,E156G,F157-,R158-,L452R,A520S,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.51           879     95  10.8%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.51           879     16   1.8%   3 +[T19R,E156G,F157-,R158-,L452R,A520S,P681R,D950N,D1084Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

CK.2.1          879    405  46.1%   0 +[H69-,V70-,V213G,S255F,G339D,K444N,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
CK.2.1          879    223  25.4%   2 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
CK.2.1          879     24   2.7%   1 +[H69-,V70-,V213G,S255F,G339D,K444N,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
CK.2.1          879     16   1.8%   1 +[H69-,V70-,V213G,S255F,G339D,K444N,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,F486P,F490S] 
CK.2.1          879     14   1.6%   1 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

BA.5.1.4        879    735  83.6%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.4        879     11   1.3%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.4        879      9   1.0%   1 +[H69-,V70-,L212S,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.4        879      9   1.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.4        879      8   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

BQ.1.6          875    557  63.7%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.6          875     66   7.5%   1 +[H69-,V70-,V213G,D215H,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.6          875     36   4.1%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,I1130M]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.6          875     33   3.8%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,Q1142R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.6          875     20   2.3%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,F855L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

AY.16           872    337  38.6%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.16           872    128  14.7%   2 +[T19R,E156G,F157-,R158-,D215H,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.16           872     99  11.4%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.16           872     33   3.8%   1 +[T19R,E156G,F157-,R158-,S255F,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.16           872     27   3.1%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.3.3          870    590  67.8%   0 +[T19R,V70I,E156G,F157-,R158-,Q414R,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.3.3          870     91  10.5%   1 +[T19R,V70I,E156G,F157-,R158-,Q414R,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.3.3          870     46   5.3%   1 +[T19R,V70I,E156G,F157-,R158-,Q414R,L452R,P681R,D950N,D1163Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.3.3          870     24   2.8%   1 +[L5F,T19R,V70I,E156G,F157-,R158-,Q414R,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.3.3          870      8   0.9%   2 +[T19R,V70I,E156G,F157-,R158-,Q414R,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BN.3.1          869    573  65.9%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,N450D]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,F486P] (consensus)
BN.3.1          869     40   4.6%   2 +[K147E,W152R,E156-,F157-,I210V,V213G,G257S,K356T,N450D]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,F486P] 
BN.3.1          869     17   2.0%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,N450D]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,R346T,L368I,R408S,V445P,F486P] 
BN.3.1          869     13   1.5%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,N450D]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,F486P] 
BN.3.1          869     13   1.5%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,N450D,N1187T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,F486P] 

FY.2            868    598  68.9%   0 +[I197T,Y200C] (consensus)
FY.2            868     36   4.1%   1 +[I197T,Y200C,V1264L] 
FY.2            868     24   2.8%   1 +[I197T,Y200C,I210-] 
FY.2            868     17   2.0%   1 +[H146K,I197T,Y200C]-[H146Q] 
FY.2            868     14   1.6%   1 +[Q173K,I197T,Y200C] 

P.1.12          868    467  53.8%   0 +[L18F,T20N,P26S,D138Y,R190S,R246G,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,P681H,N764K,D796Y,Q954H,N969K] (consensus)
P.1.12          868    246  28.3%   2 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.12          868     27   3.1%   1 +[L18F,T20N,P26S,D138Y,R190S,R246G,K417T,E484K,T961M,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,P681H,N764K,D796Y,Q954H,N969K] 
P.1.12          868     11   1.3%   3 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,N536S,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.12          868      7   0.8%   4 +[L5F,L18F,T20N,P26S,D138Y,K150R,R190S,R246G,K417T,E484K,T547I,G769K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.1.33       868    678  78.1%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.33       868     30   3.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.33       868     13   1.5%   1 +[Q14H,H69-,V70-,V213G,G339D,L452R,F486V,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.33       868     11   1.3%   2 +[H69-,V70-,V213G,G339D,L452R,F486V,V1264L]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.33       868     11   1.3%   1 +[H69-,V70-,V213G,S255F,G339D,L452R,F486V,V1264L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.2.86.1       867    540  62.3%   0 +[+16MPLF,R21T,S50L,H69-,V70-,V127F,F157S,R158G,N211-,L212I,V213G,L216F,H245N,A264D,I332V,K356T,R403K,V445H,N450D,L452W,N481K,V483-,E484K,E554K,A570V,P621S,P681R,S939F,P1143L]-[V83A,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,E484A,F490S,P681H] (consensus)
BA.2.86.1       867     87  10.0%   4 +[R21T,S50L,H69-,V70-,V127F,F157S,R158G,N211-,L212I,V213G,L216F,H245N,A264D,I332V,K356T,R403K,V445H,N450D,L452W,N481K,V483-,E484K,E554K,A570V,P621S,P681R,S939F,P1143L]-[V83A,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,E484A,F490S,P681H] 
BA.2.86.1       867     21   2.4%   1 +[+16MPLF,R21T,S50L,H69-,V70-,V127F,F157S,R158G,N211-,L212I,V213G,L216F,H245N,A264D,I332V,K356T,R403K,V445H,N450D,L452W,L455S,N481K,V483-,E484K,E554K,A570V,P621S,P681R,S939F,P1143L]-[V83A,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,E484A,F490S,P681H] 
BA.2.86.1       867     18   2.1%   1 +[+16MPLF,R21T,S50L,H69-,V70-,V127F,F157S,R158G,N211-,L212I,V213G,L216F,H245N,A264D,I332V,K356T,R403K,V445H,N450D,L452W,N481K,V483-,E484K,E554K,A570V,P621S,P681R,S939F,V1104L,P1143L]-[V83A,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,E484A,F490S,P681H] 
BA.2.86.1       867      8   0.9%   1 +[+16MPLF,R21T,S50L,H69-,V70-,V127F,F157S,R158G,N211-,L212I,V213G,L216F,H245N,A264D,I332V,K356T,R403K,V445H,N450D,L452W,N481K,V483-,E484K,E554K,A570V,T572I,P621S,P681R,S939F,P1143L]-[V83A,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,E484A,F490S,P681H] 

B.1.1.207       858    404  47.1%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.207       858    282  32.9%   1 +[E484K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.1.207       858     12   1.4%   2 +[P85S,E484K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.1.207       858      8   0.9%   1 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.1.207       858      7   0.8%   1 +[L922F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

XBB.1.5.2       854    576  67.4%   0 +[K147I,T284I] (consensus)
XBB.1.5.2       854     59   6.9%   1 +[T284I] 
XBB.1.5.2       854     24   2.8%   1 +[K147I,V213D,T284I]-[V213E] 
XBB.1.5.2       854     14   1.6%   1 +[K147I,T284I,K558N] 
XBB.1.5.2       854     13   1.5%   1 +[K147I,T284I,S494P] 

BA.2.11         854    667  78.1%   0 +[V213G,G339D,L452R,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.11         854     47   5.5%   1 +[V213G,G339D,L452R,Q493R,D1259H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.11         854     19   2.2%   1 +[V213G,G339D,L452R,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.11         854     18   2.1%   1 +[V213G,G339D,L452R,Q493R,L938F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.11         854     13   1.5%   1 +[F157L,V213G,G339D,L452R,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BY.1            847    510  60.2%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
BY.1            847     19   2.2%   4 +[K147E,W152R,F157L,I210V,V213G,G257S,F486S]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BY.1            847     17   2.0%   1 +[K147E,W152R,F157L,I210V,N211T,V213G,G257S,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BY.1            847     14   1.7%   2 +[K147E,W152R,F157L,I210V,N211T,V213G,G257S,F486S,A522S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BY.1            847     14   1.7%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,L452Q,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

AY.8            846    765  90.4%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.8            846     15   1.8%   1 +[T19R,E156G,F157-,R158-,S221L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.8            846     12   1.4%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,G1251R]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.8            846      7   0.8%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.8            846      4   0.5%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,S813I,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BW.1.1          845    666  78.8%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486A]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BW.1.1          845     22   2.6%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486A]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,F486P,F490S] 
BW.1.1          845      9   1.1%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486A,P621S]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BW.1.1          845      8   0.9%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486A,Q613H]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BW.1.1          845      6   0.7%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486A,V635I]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

BQ.1.1.35       842    637  75.7%   0 +[H69-,V70-,K147E,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.35       842     33   3.9%   1 +[L5F,H69-,V70-,K147E,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.35       842     13   1.5%   1 +[H69-,V70-,K147E,V213G,T284I,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.35       842     13   1.5%   2 +[H69-,V70-,K147E,V213G,G339D,K444T,L452R,F486V,T547K,V687I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.35       842     13   1.5%   1 +[H69-,V70-,K147E,V213G,G339D,I358V,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BQ.1.1.47       840    491  58.5%   0 +[H69-,V70-,K147I,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.47       840     51   6.1%   2 +[H69-,V70-,K147I,V213G,G339D,K444T,L452R,F486V,T523N,D1165N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.47       840     33   3.9%   1 +[H69-,V70-,K147I,W152L,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.47       840     16   1.9%   1 +[H69-,V70-,K147I,V213G,G339D,K444T,L452R,F486V,P1162L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.47       840     12   1.4%   1 +[H69-,V70-,K147I,W152R,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

A.23.1          837    268  32.0%   0 +[F157L,V367F,Q613H,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
A.23.1          837    213  25.4%   1 +[R102I,F157L,V367F,Q613H,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
A.23.1          837     50   6.0%   1 +[F157L,V367F,Q613H,P681R,P812S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
A.23.1          837     49   5.9%   2 +[R102I,F157L,V367F,E484K,Q613H,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
A.23.1          837     34   4.1%   1 +[L141F,F157L,V367F,Q613H,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.12           836    714  85.4%   0 +[H69-,V70-,V213G,G339D,L452R,F486I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.12           836     24   2.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.12           836      6   0.7%   1 +[H69-,V70-,T95I,V213G,G339D,L452R,F486I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.12           836      5   0.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486I]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.12           836      5   0.6%   1 +[H69-,V70-,L176F,V213G,G339D,L452R,F486I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.6.6           835    710  85.0%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.6.6           835     17   2.0%   1 +[D1118V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.6.6           835      9   1.1%   1 +[S1249Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.6.6           835      8   1.0%   1 +[D138H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.6.6           835      5   0.6%   1 +[F490L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.36.8        833    195  23.4%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.36.8        833    105  12.6%   1 +[V227L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.8        833     95  11.4%   2 +[M153I,A1020S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.8        833     35   4.2%   1 +[L54F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.8        833     34   4.1%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.1.153       832    580  69.7%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.153       832     39   4.7%   1 +[T1120I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.153       832     33   4.0%   1 +[F157L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.153       832     17   2.0%   1 +[L176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.153       832     15   1.8%   1 +[H625Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.160.16      831    706  85.0%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.160.16      831     19   2.3%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.160.16      831     13   1.6%   2 +[T1027I,T1117I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.160.16      831      7   0.8%   1 +[D1163Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.160.16      831      5   0.6%   1 +[S255F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.619         830    525  63.3%   0 +[I210T,E484K,D936N,S939F,T1027I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.619         830     53   6.4%   1 +[I210T,E484K,D936N,S939F,T1027I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.619         830     51   6.1%   1 +[I210T,E484K,A879S,D936N,S939F,T1027I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.619         830     34   4.1%   1 +[L5F,I210T,E484K,D936N,S939F,T1027I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.619         830     14   1.7%   1 +[I128V,I210T,E484K,D936N,S939F,T1027I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.371         827    745  90.1%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.371         827     15   1.8%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.371         827     14   1.7%   1 +[L922F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.371         827     14   1.7%   1 +[P812L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.371         827      7   0.8%   1 +[S929I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.84           825    340  41.2%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.84           825    275  33.3%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.84           825     29   3.5%   1 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.84           825     13   1.6%   2 +[L5F,T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.84           825     11   1.3%   2 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.43.1         824    473  57.4%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.43.1         824    120  14.6%   1 +[T19R,E156G,F157-,R158-,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.1         824     80   9.7%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.1         824     33   4.0%   1 +[T19R,S98F,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.1         824      7   0.8%   2 +[T19R,S98F,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5.46      824    539  65.4%   0  (consensus)
XBB.1.5.46      824     36   4.4%   2 -[R408S,S477N] 
XBB.1.5.46      824     27   3.3%   1 +[H146K]-[H146Q] 
XBB.1.5.46      824     21   2.5%   1 -[K417N] 
XBB.1.5.46      824     16   1.9%   1 +[L5F] 

GN.1            823    503  61.1%   0 +[F456L] (consensus)
GN.1            823     40   4.9%   1 +[F456L,T747I] 
GN.1            823     37   4.5%   1 +[H146K,F456L]-[H146Q] 
GN.1            823     36   4.4%   1 +[G181V,F456L] 
GN.1            823     16   1.9%   1 +[F456L]-[R408S] 

FU.2.1          820    684  83.4%   0 +[E180V,T478R,T547I,E619Q]-[T478K] (consensus)
FU.2.1          820      9   1.1%   1 +[E180V,Y351F,T478R,T547I,E619Q]-[T478K] 
FU.2.1          820      7   0.9%   1 +[H146K,E180V,T478R,T547I,E619Q]-[H146Q,T478K] 
FU.2.1          820      5   0.6%   1 +[F157L,E180V,T478R,T547I,E619Q]-[T478K] 
FU.2.1          820      5   0.6%   1 +[L176F,E180V,T478R,T547I,E619Q]-[T478K] 

BF.11.1         818    553  67.6%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,S1252F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.11.1         818     52   6.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T547I,S1252F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.11.1         818     28   3.4%   1 +[Q14R,H69-,V70-,V213G,G339D,L452R,F486V,S1252F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.11.1         818     24   2.9%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V,S1252F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.11.1         818      9   1.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,G1124V,S1252F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.1.464       815    712  87.4%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.464       815     11   1.3%   1 +[L822F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.464       815      9   1.1%   1 +[L1244F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.464       815      7   0.9%   1 +[M1229I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.464       815      6   0.7%   1 +[T22I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

CH.1.1.24       814    486  59.7%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
CH.1.1.24       814     31   3.8%   2 +[S71P,K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S,Q1180K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1.24       814     30   3.7%   2 +[K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S,T572I,D1184N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1.24       814     26   3.2%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S,Q613H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1.24       814     15   1.8%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S,H1101Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

HK.3.2          812    446  54.9%   0 +[Q14K,Q52H,L455F,F456L] (consensus)
HK.3.2          812    130  16.0%   1 +[Q14K,Q52H,L455F,F456L,Q677H] 
HK.3.2          812     24   3.0%   1 +[Q14K,Q52H,N185D,L455F,F456L] 
HK.3.2          812     16   2.0%   2 +[Q14K,A27-,Q52H,L455F,F456L]-[L24-,A27S] 
HK.3.2          812     15   1.8%   2 +[Q14K,Q52H,R214H,L455F,F456L,I1221T] 

AY.80           808    334  41.3%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.80           808    272  33.7%   1 +[T19R,T20I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.80           808    100  12.4%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,A1020S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.80           808     28   3.5%   1 +[T19R,R21T,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.80           808     16   2.0%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,A701S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

EJ.2            807    611  75.7%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,D1139H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
EJ.2            807     14   1.7%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,D1139H,D1260E]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
EJ.2            807     13   1.6%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,D1139H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,R408S,V445P,F486P] 
EJ.2            807     11   1.4%   1 +[L5F,K147E,W152R,F157L,I210V,V213G,G257S,K356T,D1139H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
EJ.2            807      9   1.1%   1 +[K147E,W152R,F157L,I210V,V213G,T250A,G257S,K356T,D1139H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 

XBB.1.5.19      804    518  64.4%   0  (consensus)
XBB.1.5.19      804     40   5.0%   1 +[A411S] 
XBB.1.5.19      804     26   3.2%   1 +[F59L] 
XBB.1.5.19      804     19   2.4%   1 +[S98F] 
XBB.1.5.19      804     16   2.0%   1 +[N856S] 

B.1.499         804    431  53.6%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.499         804     78   9.7%   1 +[E654Q]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.499         804     57   7.1%   1 +[A626S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.499         804     16   2.0%   2 +[A626S,P1162L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.499         804     15   1.9%   1 +[G181A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BU.1            801    614  76.7%   0 +[H69-,V70-,V213G,G339D,K444M,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BU.1            801     51   6.4%   1 +[H69-,V70-,V213G,S255F,G339D,K444M,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BU.1            801     15   1.9%   2 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,F486P,F490S] 
BU.1            801     14   1.7%   1 +[L5F,H69-,V70-,V213G,G339D,K444M,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BU.1            801     10   1.2%   1 +[H69-,V70-,V213G,G252D,G339D,K444M,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

CK.2.1.1        801    578  72.2%   0 +[H69-,V70-,V213G,S255F,G339D,K444N,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
CK.2.1.1        801     28   3.5%   1 +[H69-,V70-,V213G,S255F,G339D,K444N,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
CK.2.1.1        801     17   2.1%   1 +[H69-,V70-,V213G,S255F,T323I,G339D,K444N,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
CK.2.1.1        801     14   1.7%   1 +[H69-,V70-,V213G,T250I,S255F,G339D,K444N,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
CK.2.1.1        801     10   1.2%   1 +[H69-,V70-,V213G,S255F,G339D,K444N,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,F486P,F490S] 

B.1.177.42      801    714  89.1%   0 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.42      801     35   4.4%   1 +[P26H,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.42      801      9   1.1%   1 +[F140L,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.42      801      6   0.7%   1 +[A222V,T553I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.42      801      4   0.5%   1 +[L216F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.436         800    748  93.5%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.436         800     11   1.4%   1 +[G75V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.436         800      8   1.0%   1 +[K537R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.436         800      3   0.4%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.436         800      3   0.4%   1 +[P384L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.36.27       797    496  62.2%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.36.27       797    162  20.3%   1 +[A1087S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.27       797     33   4.1%   1 +[T470N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.27       797     29   3.6%   1 +[V213M]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.27       797     16   2.0%   2 +[D936G,A1087S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.1.354       796    433  54.4%   0 +[D138Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.354       796     36   4.5%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.354       796     25   3.1%   2 +[S12F,D138Y,L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.354       796     22   2.8%   1 +[D138Y,Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.354       796     18   2.3%   1 +[H66R,D138Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.320         792    445  56.2%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.320         792    145  18.3%   1 +[V6F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.320         792     72   9.1%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.320         792     46   5.8%   1 +[S221L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.320         792      4   0.5%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.206         791    667  84.3%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.206         791     17   2.1%   2 +[A701V,D1260Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.206         791     13   1.6%   1 +[R1107S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.206         791      6   0.8%   1 +[A27V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.206         791      5   0.6%   1 +[S640F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

EG.5.2          790    398  50.4%   0 +[F456L] (consensus)
EG.5.2          790     93  11.8%   2 +[H69-,V70-,F456L] 
EG.5.2          790     40   5.1%   1 +[F456L,A845S] 
EG.5.2          790     26   3.3%   2 +[H146K,F456L,A845S]-[H146Q] 
EG.5.2          790     15   1.9%   1 +[H146K,F456L]-[H146Q] 

BQ.1.25.1       790    641  81.1%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,L858I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.25.1       790     13   1.6%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,M731I,L858I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.25.1       790     12   1.5%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,L858I]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.25.1       790     11   1.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,R646H,L858I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.25.1       790      6   0.8%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,L858I,K1045R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BA.1.12         789    681  86.3%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,E309Q,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.12         789     14   1.8%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,E309Q,G339D,S371L,Q493R,G496S,T547K,N856K,L981F,R1185H]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.12         789     13   1.6%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,E309Q,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.12         789     11   1.4%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,E309Q,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S,N764K] 
BA.1.12         789      6   0.8%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,E309Q,G339D,S371L,Q493R,G496S,T547K,N856K,L981F,Q1113L]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

BF.7.7          787    662  84.1%   0 +[H69-,V70-,D80G,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.7.7          787     19   2.4%   1 +[H69-,V70-,D80G,V213G,G339D,L452R,F486V,Q675H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.7          787      9   1.1%   1 +[H69-,V70-,D80G,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.7.7          787      7   0.9%   1 +[H69-,V70-,D80G,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.7          787      5   0.6%   1 +[F2L,H69-,V70-,D80G,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.2.24       787    458  58.2%   0 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.24       787     37   4.7%   1 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V,T547K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.24       787     22   2.8%   1 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V,L841F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.24       787     17   2.2%   1 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V,D574N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.24       787     15   1.9%   1 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,N460K,F486P,F490S] 

B.1.265         786    399  50.8%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.265         786     94  12.0%   1 +[Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.265         786     41   5.2%   1 +[D1118Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.265         786     38   4.8%   1 +[V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.265         786     35   4.5%   2 +[P26L,Q314K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

ED.2            785    500  63.7%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
ED.2            785     63   8.0%   1 +[H69-,V70-,G181V,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
ED.2            785     56   7.1%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,T883I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
ED.2            785     21   2.7%   1 +[H69-,V70-,V213G,S256L,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
ED.2            785     12   1.5%   1 +[L5F,H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

CM.8.1          782    493  63.0%   0 +[M153T,N164K,V213G,H245N,G257D,G339D,K444R,N450D,L452M,E484R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,E484A,F486P,F490S] (consensus)
CM.8.1          782     30   3.8%   1 +[M153T,N164K,V213G,H245N,G257D,G339D,R403K,K444R,N450D,L452M,E484R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,E484A,F486P,F490S] 
CM.8.1          782     10   1.3%   1 +[M153T,N164K,G181E,V213G,H245N,G257D,G339D,K444R,N450D,L452M,E484R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,E484A,F486P,F490S] 
CM.8.1          782      8   1.0%   1 +[M153T,N164K,V213G,H245N,G257D,G339D,K444R,N450D,L452M,E484R,F486S,D1118Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,E484A,F486P,F490S] 
CM.8.1          782      8   1.0%   1 +[T29I,M153T,N164K,V213G,H245N,G257D,G339D,K444R,N450D,L452M,E484R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,E484A,F486P,F490S] 

CP.1            782    564  72.1%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
CP.1            782     61   7.8%   1 +[P9L,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
CP.1            782     14   1.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
CP.1            782     12   1.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
CP.1            782     12   1.5%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

AZ.1            779    636  81.6%   0 +[T95I,E484K,D796H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] (consensus)
AZ.1            779     89  11.4%   1 +[T95I,A222V,E484K,D796H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
AZ.1            779      9   1.2%   1 +[T95I,E180D,E484K,D796H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
AZ.1            779      5   0.6%   1 +[T95I,E484K,T678I,D796H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
AZ.1            779      5   0.6%   1 +[T95I,E484K,S680F,D796H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

DT.2            776    684  88.1%   0 +[H69-,V70-,M153I,V213G,G339D,K444T,L452R,F486V,T547K]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
DT.2            776      7   0.9%   1 +[L5F,H69-,V70-,M153I,V213G,G339D,K444T,L452R,F486V,T547K]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
DT.2            776      6   0.8%   1 +[H69-,V70-,M153I,V213G,G339D,K444T,L452R,F486V,T547K,G1124D]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
DT.2            776      5   0.6%   1 +[H69-,V70-,M153I,V213G,G339D,K444T,L452R,F486V,T547K,A688V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
DT.2            776      4   0.5%   1 +[H69-,V70-,M153I,V213G,G339D,K444T,L452R,F486V,T547K,V1230M]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

XBB.1.5.66      774    511  66.0%   0  (consensus)
XBB.1.5.66      774     17   2.2%   1 +[T478R]-[T478K] 
XBB.1.5.66      774     13   1.7%   1 -[K417N] 
XBB.1.5.66      774     10   1.3%   1 +[H146K]-[H146Q] 
XBB.1.5.66      774      9   1.2%   1 +[T208M] 

DF.1            773    568  73.5%   0 +[H69-,V70-,V213G,A262S,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
DF.1            773     36   4.7%   1 +[H69-,V70-,F157L,V213G,A262S,G339D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
DF.1            773     21   2.7%   1 +[H69-,V70-,V213G,A262S,G339D,L452R,F486V,P1263R]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
DF.1            773     14   1.8%   1 +[H69-,V70-,V213G,A262S,G339D,L452R,F486V,P1162S]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
DF.1            773     12   1.6%   2 +[H69-,V70-,V213G,A262S,G339D,G446V,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

B.3             771    712  92.3%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.3             771     21   2.7%   1 +[S254F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.3             771      5   0.6%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.3             771      3   0.4%   1 +[A879T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.3             771      3   0.4%   1 +[W64L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

A.2             770    552  71.7%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
A.2             770     53   6.9%   1 +[I197V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
A.2             770     25   3.2%   1 +[Q675R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
A.2             770     14   1.8%   9 +[L141-,G142-,V143-,D215A,+215AGY,L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
A.2             770      9   1.2%   5 +[L141-,G142-,V143-,L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.16.9      767    505  65.8%   0 +[E180V,F456L,T478R]-[T478K] (consensus)
XBB.1.16.9      767     54   7.0%   1 +[E180V,F456L,T478R,S494P]-[T478K] 
XBB.1.16.9      767     16   2.1%   1 +[E180V,A344S,F456L,T478R]-[T478K] 
XBB.1.16.9      767     16   2.1%   1 +[E180V,F456L,T478R,K529N]-[T478K] 
XBB.1.16.9      767     15   2.0%   1 +[E180V,S256L,F456L,T478R]-[T478K] 

FL.10           765    454  59.3%   0  (consensus)
FL.10           765     24   3.1%   1 +[T51I] 
FL.10           765     19   2.5%   1 -[R408S] 
FL.10           765     15   2.0%   2 +[K356T,T523N] 
FL.10           765     14   1.8%   1 -[G142D] 

EG.1.2          763    580  76.0%   0 +[Q613H] (consensus)
EG.1.2          763     25   3.3%   1 +[P479R,Q613H] 
EG.1.2          763     16   2.1%   1 +[Q613H,P1162S] 
EG.1.2          763      8   1.0%   1 +[Q613H,E654D] 
EG.1.2          763      7   0.9%   1 +[P85L,Q613H] 

B.1.36.1        763    288  37.7%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.36.1        763    212  27.8%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.1        763     34   4.5%   1 +[A520S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.1        763     25   3.3%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.1        763     16   2.1%   1 +[Q779L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.4.13         763    505  66.2%   0 +[T19R,T95I,E156G,F157-,R158-,V213A,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4.13         763     48   6.3%   1 +[T19R,T95I,E156G,F157-,R158-,V213A,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.13         763     31   4.1%   1 +[L5F,T19R,T95I,E156G,F157-,R158-,V213A,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.13         763     17   2.2%   1 +[T19R,T95I,E156G,F157-,R158-,V213A,L452R,P681R,D950N,D1165Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.13         763     15   2.0%   1 +[T19R,T95I,E156G,F157-,R158-,V213A,L452R,P681R,S937T,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

EG.1.4          761    511  67.1%   0 +[Q613H] (consensus)
EG.1.4          761     16   2.1%   1 +[D215H,Q613H] 
EG.1.4          761     15   2.0%   1 +[Q613H]-[R408S] 
EG.1.4          761     14   1.8%   1 +[H146K,Q613H]-[H146Q] 
EG.1.4          761     12   1.6%   1 +[M177T,Q613H] 

B.1.375         755    489  64.8%   0 +[H69-,V70-]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.375         755     86  11.4%   1 +[H69-,V70-,C1236S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.375         755     70   9.3%   1 +[H69-,V70-,S477R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.375         755     14   1.9%   1 +[H69-,V70-,V622I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.375         755      6   0.8%   1 +[H49Y,H69-,V70-]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.23.1       753    655  87.0%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.23.1       753     23   3.1%   1 +[V213G,G257D,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.23.1       753     10   1.3%   4 +[V213G,G339D,Q493R]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.23.1       753      8   1.1%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.23.1       753      6   0.8%   1 +[L5F,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.551         752    256  34.0%   0 +[P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.551         752    213  28.3%   2 +[S254F,P681R,G769V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.551         752     86  11.4%   1 +[S98F,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.551         752     50   6.6%   1 +[T95A,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.551         752     14   1.9%   3 +[S254F,P681R,T747I,G769V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.3.10       752    673  89.5%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.3.10       752      8   1.1%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.10       752      8   1.1%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.10       752      6   0.8%   1 +[V213G,G339D,Q493R,P1143S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.10       752      6   0.8%   1 +[V213G,G339D,L452M,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.239         747    344  46.1%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.239         747    128  17.1%   2 +[L18F,P251H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.239         747     38   5.1%   1 +[R237S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.239         747     30   4.0%   1 +[D178N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.239         747     17   2.3%   1 +[I233V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.568         747    594  79.5%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.568         747     19   2.5%   1 +[P561S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.568         747      9   1.2%   1 +[K1073N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.568         747      8   1.1%   1 +[T22I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.568         747      8   1.1%   1 +[D80N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

FL.13           744    427  57.4%   0  (consensus)
FL.13           744     50   6.7%   4 +[Q14H,K182E,F456L,E484K]-[E484A] 
FL.13           744     23   3.1%   1 -[K417N] 
FL.13           744     22   3.0%   1 +[F456L] 
FL.13           744      8   1.1%   1 +[L5F] 

BA.2.3.4        744    684  91.9%   0 +[V213G,G339D,Q493R,N641S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.3.4        744      9   1.2%   1 +[V213G,G339D,Q493R,N641S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.4        744      4   0.5%   1 +[V213G,G339D,Q493R,N641S,S943G]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.4        744      4   0.5%   1 +[V213G,G339D,Q493R,N641S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.4        744      4   0.5%   1 +[V213G,G339D,K444R,Q493R,N641S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.177.24      741    663  89.5%   0 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.24      741     32   4.3%   1 +[R214L,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.24      741      7   0.9%   1 +[A222V,E1262A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.24      741      4   0.5%   1 +[H69Y,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.24      741      4   0.5%   1 +[A222V,C1250F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.7.14.1       739    363  49.1%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,C1243F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.7.14.1       739    209  28.3%   1 +[H69-,V70-,V83F,V213G,G339D,L452R,F486V,C1243F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.14.1       739     10   1.4%   2 +[H69-,V70-,V83F,V213G,G339D,L452R,F486V,T739A,C1243F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.14.1       739      8   1.1%   3 +[H69-,V70-,V83F,V213G,E309Q,G339D,L452R,F486V,N1187S,C1243F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.14.1       739      6   0.8%   1 +[H69-,V70-,G75V,V213G,G339D,L452R,F486V,C1243F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

BF.11.2         739    547  74.0%   0 +[H69-,V70-,K147N,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.11.2         739     59   8.0%   1 +[H69-,V70-,T76I,K147N,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.11.2         739     26   3.5%   1 +[H69-,V70-,K147N,V213G,G339D,L452R,F486V,I598V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.11.2         739     24   3.2%   1 +[L5F,H69-,V70-,K147N,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.11.2         739      6   0.8%   1 +[H69-,V70-,K147N,V213G,G339D,L452R,F486V,T883I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.351.2       737    387  52.5%   0 +[L18F,D80A,D215G,L242-,A243-,L244-,E484K,A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.351.2       737     53   7.2%   1 +[L18F,D80A,D215G,L242-,A243-,L244-,E484K,A701V,I934V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.351.2       737     25   3.4%   1 +[L18F,D80A,D215G,L242-,A243-,L244-,E484K,A701V,I1232F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.351.2       737     19   2.6%   2 +[L18F,G75V,D80A,D215G,L242-,A243-,L244-,E484K,A701V,I934V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.351.2       737     15   2.0%   1 +[L18F,D80A,E180G,D215G,L242-,A243-,L244-,E484K,A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.346         734    617  84.1%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.346         734     17   2.3%   1 +[P812L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.346         734      8   1.1%   2 +[D287G,V1122L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.346         734      8   1.1%   1 +[Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.346         734      7   1.0%   1 +[I569F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.1.10        733    558  76.1%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.10        733     21   2.9%   2 +[S221L,T250A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.10        733     19   2.6%   1 +[M1237T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.10        733     17   2.3%   1 +[A879S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.10        733      7   1.0%   3 +[H69-,V70-,S221L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.18.1      732    223  30.5%   0  (consensus)
XBB.1.18.1      732     95  13.0%   1 -[R346T] 
XBB.1.18.1      732     59   8.1%   2 -[R346T,K417N] 
XBB.1.18.1      732     27   3.7%   2 +[F456L]-[R346T] 
XBB.1.18.1      732     21   2.9%   3 +[F456L,H1083Y]-[R346T] 

BR.2            728    457  62.8%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,L452R,F486I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
BR.2            728    150  20.6%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,L452R,F486I,S730F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BR.2            728     15   2.1%   1 +[K147E,W152R,F157L,I210V,V213G,T240I,G257S,L452R,F486I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BR.2            728      8   1.1%   2 +[A27-,K147E,W152R,F157L,I210V,V213G,G257S,L452R,F486I]-[L24-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BR.2            728      7   1.0%   2 +[K147E,W152R,F157L,I210V,V213G,G257S,A348S,L452R,F486I,S730F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

B.1.1.333       727    650  89.4%   0 +[L54F,D138Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.333       727     15   2.1%   1 +[L54F,D138Y,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.333       727      9   1.2%   1 +[L54F,D138Y,T547I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.333       727      9   1.2%   1 +[S12F,L54F,D138Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.333       727      5   0.7%   1 +[L54F,D138Y,T572I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.1.301       725    401  55.3%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.301       725    139  19.2%   1 +[V687L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.301       725     95  13.1%   2 +[L5F,V687L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.301       725     18   2.5%   2 +[A222V,V687L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.301       725     13   1.8%   2 +[I68T,V687L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

FY.5            722    243  33.7%   0 +[Y200C,T478R]-[T478K] (consensus)
FY.5            722    168  23.3%   1 +[Y200C,T478R,T572I]-[T478K] 
FY.5            722     49   6.8%   4 +[M153I,F186S,Y200C,S247N,T478R,T572I]-[T478K] 
FY.5            722     23   3.2%   1 +[L176F,Y200C,T478R]-[T478K] 
FY.5            722     19   2.6%   1 +[Y200C,A222V,T478R]-[T478K] 

BA.2.3.18       720    327  45.4%   0 +[V213G,G339D,Q493R,I692F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.18       720    325  45.1%   1 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.3.18       720      4   0.6%   2 +[V213G,G339D,Q493R,A706V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.18       720      4   0.6%   1 +[V213G,G339D,Q493R,I692F,Q1201K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.18       720      4   0.6%   1 +[I197V,V213G,G339D,Q493R,I692F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.4.6.1        720    602  83.6%   0 +[H69-,V70-,W152L,V213G,G339D,L452R,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.4.6.1        720      8   1.1%   2 +[H69-,V70-,W152L,V213G,G257S,G339D,L452R,F486V,N658S,D1168Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.6.1        720      7   1.0%   1 +[H69-,V70-,W152L,V213G,G339D,L452R,F486V,N658S,D1163Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.6.1        720      6   0.8%   1 +[H69-,V70-,W152L,V213G,G339D,L452R,E484V,F486V,N658S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,E484A,F486P,F490S] 
BA.4.6.1        720      5   0.7%   1 +[H69-,V70-,W152L,V213G,G339D,L452R,F486V,N658S]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.93          719    648  90.1%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.93          719     10   1.4%   1 +[A1087S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.93          719      9   1.3%   1 +[D1146H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.93          719      5   0.7%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.93          719      5   0.7%   1 +[Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.1.28       719    539  75.0%   0 +[H69-,V70-,V213G,P251L,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.28       719     52   7.2%   1 +[H69-,V70-,V213G,P251L,G339D,K444T,L452R,F486V,A694V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.28       719     12   1.7%   1 +[H69-,V70-,V213G,P251L,S255F,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.28       719     11   1.5%   1 +[H69-,V70-,V213G,P251L,G339D,K444T,L452R,F486V,P1162S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.28       719     10   1.4%   1 +[H69-,V70-,V213G,P251L,G339D,K444T,L452R,F486V,A684V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

B.1.111         717    214  29.8%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.111         717    175  24.4%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,P681H,N764K,D796Y,Q954H,N969K] 
B.1.111         717     67   9.3%   1 +[W152R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.111         717     28   3.9%   3 +[L249S,E484K,F1121L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.111         717     18   2.5%   1 +[D215G]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.24         716    268  37.4%   0 +[H69-,V70-,V213G,T240I,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.24         716    224  31.3%   1 +[H69-,V70-,V213G,T240I,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.24         716     54   7.5%   1 +[H69-,V70-,V213G,T240I,G339D,K444T,L452R,F486V,A701V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.24         716     52   7.3%   1 +[H69-,V70-,V213G,T240I,S255F,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.24         716     26   3.6%   2 +[F32V,H69-,V70-,V213G,T240I,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

AY.4.2.5        715    609  85.2%   0 +[T19R,T95I,Y145H,E156G,F157-,R158-,A222V,Q414K,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4.2.5        715     48   6.7%   1 +[T19R,T95I,Y145H,E156G,F157-,R158-,A222V,Q414K,L452R,P681R,M731I,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.2.5        715     11   1.5%   1 +[T19R,T95I,Y145H,E156G,F157-,R158-,A222V,Q414K,G446D,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.2.5        715      5   0.7%   1 +[T19R,T95I,Y145H,E156G,F157-,R158-,A222V,Q414K,G446V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.2.5        715      4   0.6%   1 +[L5F,T19R,T95I,Y145H,E156G,F157-,R158-,A222V,Q414K,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.177.6       710    582  82.0%   0 +[L18F,Q23H,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.6       710     22   3.1%   1 +[L18F,Q23H,D215Y,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.6       710     22   3.1%   1 +[L18F,Q23H,A222V,A1020V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.6       710     17   2.4%   2 +[L18F,Q23H,A222V,G446V,D796H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.6       710     10   1.4%   1 +[L18F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.1.170       706    487  69.0%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.170       706     86  12.2%   1 +[E583Q]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.170       706     40   5.7%   1 +[D80Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.170       706      6   0.8%   1 +[V1228L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.170       706      5   0.7%   1 +[H49Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.44         705    536  76.0%   0 +[V213G,G339D,S371Y,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.44         705     57   8.1%   1 +[L176F,V213G,G339D,S371Y,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,V445P,G446S,N460K,F486P,F490S] 
BA.2.44         705     22   3.1%   1 +[V213G,G339D,S371Y,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.44         705      6   0.9%   1 +[V213G,G339D,S371Y,K444R,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,V445P,G446S,N460K,F486P,F490S] 
BA.2.44         705      6   0.9%   1 +[V213G,G339D,S371Y,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,V445P,G446S,N460K,F486P,F490S,P681H] 

GK.2            702    470  67.0%   0 +[L455F,F456L,V511I] (consensus)
GK.2            702     40   5.7%   2 +[L5F,F157L,L455F,F456L,V511I] 
GK.2            702     22   3.1%   1 +[N148T,L455F,F456L,V511I] 
GK.2            702     18   2.6%   1 +[K356T,L455F,F456L,V511I] 
GK.2            702     10   1.4%   1 +[L455F,F456L,V511I,K1205N] 

XBB.2.3.3       700    434  62.0%   0 +[K182N,D253G,P521S]-[G252V] (consensus)
XBB.2.3.3       700     18   2.6%   1 +[H146K,K182N,D253G,P521S]-[H146Q,G252V] 
XBB.2.3.3       700     12   1.7%   1 +[K182N,D253G,P521S]-[G252V,K417N] 
XBB.2.3.3       700     10   1.4%   1 +[K182N,D253G,S494P,P521S]-[G252V] 
XBB.2.3.3       700      8   1.1%   1 +[K182N,D253G,F456L,P521S]-[G252V] 

BF.7.26         699    254  36.3%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.7.26         699    180  25.8%   1 +[H69-,V70-,T76I,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.26         699     36   5.2%   3 +[H69-,V70-,T76I,V213G,G339D,L452R,F486V,L822F,C1250F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.26         699     34   4.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,K1245R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.26         699     21   3.0%   1 +[H69-,V70-,H146-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

B.6             698    555  79.5%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.6             698     21   3.0%   1 +[K77M]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.6             698     20   2.9%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.6             698     16   2.3%   3 +[A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.6             698      6   0.9%   2 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

BA.2.50         697    644  92.4%   0 +[L212S,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.50         697     13   1.9%   1 +[L212S,V213G,G339D,Q493R,E1151D]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.50         697      7   1.0%   1 +[L212S,V213G,G339D,Q493R,I624T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.50         697      4   0.6%   1 +[S98F,L212S,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.50         697      3   0.4%   1 +[L212S,V213G,G339D,Q493R,Q613H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

EE.2            697    391  56.1%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
EE.2            697    115  16.5%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
EE.2            697     64   9.2%   2 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,Q675H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
EE.2            697     13   1.9%   2 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,P1162L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
EE.2            697      5   0.7%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,A1078T]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

EG.4            696    504  72.4%   0  (consensus)
EG.4            696     19   2.7%   1 +[H146K]-[H146Q] 
EG.4            696     10   1.4%   1 -[K417N] 
EG.4            696      7   1.0%   2 +[S256L]-[Y144-] 
EG.4            696      7   1.0%   2 +[H146K,S256L]-[H146Q] 

B.1.22          696    534  76.7%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.22          696     40   5.7%   1 +[D215G]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.22          696     34   4.9%   2 +[L452M,F486L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.22          696     14   2.0%   1 +[A1087S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.22          696      6   0.9%   1 +[F486L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.4.1       695    578  83.2%   0 +[F486S,S673G,T883I]-[F486P] (consensus)
XBB.1.4.1       695     14   2.0%   1 +[F486S,S673G,T883I,L938F]-[F486P] 
XBB.1.4.1       695      6   0.9%   1 +[F486S,S673G,T883I]-[K417N,F486P] 
XBB.1.4.1       695      6   0.9%   1 +[H245Y,F486S,S673G,T883I]-[F486P] 
XBB.1.4.1       695      5   0.7%   1 +[N354K,F486S,S673G,T883I]-[F486P] 

B.1.1.189       694    171  24.6%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.189       694    155  22.3%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.189       694     47   6.8%   1 +[E654Q]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.189       694     28   4.0%   1 +[V483F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.189       694     14   2.0%   2 +[N282D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

EE.1            694    546  78.7%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
EE.1            694     18   2.6%   1 +[H69-,V70-,K182E,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
EE.1            694     15   2.2%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
EE.1            694     10   1.4%   1 +[H69-,V70-,P209L,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
EE.1            694      9   1.3%   2 +[H69-,V70-,S112L,K182E,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BA.2.72         692    502  72.5%   0 +[L212S,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.72         692     56   8.1%   1 +[L212S,V213G,D215E,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.72         692     23   3.3%   1 +[L212S,V213G,G339D,Q493R,T632N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.72         692     22   3.2%   1 +[L212S,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.72         692      6   0.9%   1 +[L5F,L212S,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.1.1.6        692    616  89.0%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.1.6        692     22   3.2%   1 +[A67V,H69-,V70-,T76I,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.6        692     18   2.6%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,S254F,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.6        692      4   0.6%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F,I1169V]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.6        692      3   0.4%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

XBB.1.5.14      691    420  60.8%   0  (consensus)
XBB.1.5.14      691     46   6.7%   1 +[A163S] 
XBB.1.5.14      691     12   1.7%   2 +[T19L,Q675H]-[T19I] 
XBB.1.5.14      691     11   1.6%   1 +[D1153Y] 
XBB.1.5.14      691     11   1.6%   1 +[H146K]-[H146Q] 

DU.1            687    473  68.9%   0 +[H69-,V70-,V213G,D253G,G339D,K444T,L452R,F486V,E1144Q]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
DU.1            687     67   9.8%   1 +[H69-,V70-,V213G,D253G,G339D,K444T,L452R,F486V,E1144Q,P1162S]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
DU.1            687     24   3.5%   1 +[H69-,V70-,V213G,D253G,G339D,K444T,L452R,F486V,E1144Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
DU.1            687     12   1.7%   1 +[H69-,V70-,V213G,D253G,G339D,K444T,L452R,F486V,L922F,E1144Q]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
DU.1            687     12   1.7%   1 +[H69-,V70-,V213G,D253G,G339D,K444T,L452R,F486V,T1117I,E1144Q]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BE.5            686    504  73.5%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,P1162L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BE.5            686     37   5.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,P1162L]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.5            686     33   4.8%   2 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.5            686     18   2.6%   2 +[H69-,V70-,G75V,W152L,V213G,G339D,L452R,F486V,P1162L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.5            686      9   1.3%   1 +[H69-,V70-,V213G,P251L,G339D,L452R,F486V,P1162L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.71           684    278  40.6%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,S1252F]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.71           684    180  26.3%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,S1252F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.71           684     28   4.1%   1 +[T19R,T20I,E156G,F157-,R158-,A222V,L452R,P681R,D950N,S1252F]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.71           684     11   1.6%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,S1252F]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.71           684     10   1.5%   2 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,A1078S,S1252F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

GY.5            683    490  71.7%   0 +[E180V,T478R]-[T478K] (consensus)
GY.5            683     14   2.0%   1 +[H146K,E180V,T478R]-[H146Q,T478K] 
GY.5            683     14   2.0%   1 +[E180V,T478R]-[K417N,T478K] 
GY.5            683     11   1.6%   1 +[E180V,Q218P,T478R]-[T478K] 
GY.5            683     10   1.5%   1 +[E180V,T478R,T573I]-[T478K] 

XBB.1.5.5       683    242  35.4%   0 +[K1181I] (consensus)
XBB.1.5.5       683    131  19.2%   1 +[G181V,K1181I] 
XBB.1.5.5       683    111  16.3%   1 +[T523A,K1181I] 
XBB.1.5.5       683     29   4.2%   2 +[E471Q,T523A,K1181I] 
XBB.1.5.5       683     10   1.5%   1 +[K1181I]-[K417N] 

Q.7             683    415  60.8%   0 +[H69-,V70-,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] (consensus)
Q.7             683    134  19.6%   1 +[H69-,V70-,M177T,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
Q.7             683     23   3.4%   1 +[H69-,V70-,A570D,Q677H,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
Q.7             683     11   1.6%   2 +[S12F,H69-,V70-,A570D,T678I,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
Q.7             683      8   1.2%   1 +[H69-,V70-,W258S,A570D,T716I,S982A,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

B.1.177.18      681    593  87.1%   0 +[A222V,E583D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.18      681     14   2.1%   1 +[T76I,A222V,E583D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.18      681     12   1.8%   1 +[A222V,D427G,E583D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.18      681     10   1.5%   1 +[A222V,E484Q,E583D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.18      681      7   1.0%   1 +[A222V,E583D,R765L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.620         678    475  70.1%   0 +[P26S,H69-,V70-,V126A,L242-,A243-,L244-,H245Y,E484K,T1027I,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] (consensus)
B.1.620         678     26   3.8%   4 +[P26S,H69-,V70-,V126A,E484K,T1027I,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.620         678     18   2.7%   1 +[P26S,H69-,V70-,V126A,N137S,L242-,A243-,L244-,H245Y,E484K,T1027I,D1118H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.620         678     12   1.8%   1 +[P26S,H69-,V70-,V126A,L242-,A243-,L244-,H245Y,E484K,T1027I,D1118H,V1133F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 
B.1.620         678      8   1.2%   1 +[P26S,H69-,V70-,V126A,L242-,A243-,L244-,H245Y,E484K,T1027I,D1118H,Q1208H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

AY.4.11         678    492  72.6%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4.11         678     30   4.4%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.11         678     29   4.3%   1 +[T19R,T95I,I100L,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.11         678     13   1.9%   1 +[T19R,T29I,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.11         678     10   1.5%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,K1191M]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.258.14      678    545  80.4%   0 +[N439K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.258.14      678     44   6.5%   1 +[L18F,N439K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.258.14      678     15   2.2%   1 +[M153I,N439K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.258.14      678      4   0.6%   1 +[N439K,G1219S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.258.14      678      4   0.6%   1 +[A67V,N439K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

FL.24           675    242  35.9%   0 +[Q613H,A688V] (consensus)
FL.24           675    197  29.2%   1 +[T478R,Q613H,A688V]-[T478K] 
FL.24           675     11   1.6%   3 +[T478R,E554K,Q613H,A688V,T961M]-[T478K] 
FL.24           675      9   1.3%   2 +[T478R,K558N,Q613H,A688V]-[T478K] 
FL.24           675      9   1.3%   1 +[Q613H,A688V,T961M] 

XBB.1.16.17     673    265  39.4%   0 +[E180V,T478R,E554K]-[T478K] (consensus)
XBB.1.16.17     673    165  24.5%   3 +[E180V,K182Q,F456L,T478R,E554K,A701V]-[T478K] 
XBB.1.16.17     673     60   8.9%   1 +[E180V,F456L,T478R,E554K]-[T478K] 
XBB.1.16.17     673     12   1.8%   1 +[H146K,E180V,T478R,E554K]-[H146Q,T478K] 
XBB.1.16.17     673     12   1.8%   3 +[E180V,F186S,T478R,E554Q,N556K]-[T478K] 

XBB.1.16.19     672    439  65.3%   0 +[E180V,T478R]-[T478K] (consensus)
XBB.1.16.19     672     14   2.1%   1 +[T76A,E180V,T478R]-[T478K] 
XBB.1.16.19     672     13   1.9%   1 +[E180V,T323I,T478R]-[T478K] 
XBB.1.16.19     672     11   1.6%   1 +[H146K,E180V,T478R]-[H146Q,T478K] 
XBB.1.16.19     672     11   1.6%   2 +[E180V,T478R,S810L,E1150D]-[T478K] 

BN.1.1          672    490  72.9%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,S494P]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
BN.1.1          672      9   1.3%   1 +[K147E,W152R,F157L,I210V,V213G,K356T,S494P]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.1          672      9   1.3%   1 +[I68V,K147E,W152R,F157L,I210V,V213G,G257S,K356T,S494P]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.1          672      8   1.2%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,G261A,K356T,S494P]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.1          672      6   0.9%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,S494P,Q675H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 

B.1.1.279       671    591  88.1%   0 +[R21I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.279       671     35   5.2%   1 +[R21I,L841R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.279       671     11   1.6%   1 +[R21I,T716I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.279       671      4   0.6%   1 +[R21I,N211S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.279       671      3   0.4%   1 +[R21I,S255P]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.9            668    595  89.1%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.9            668     22   3.3%   1 +[H69-,V70-,N185S,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.9            668      6   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BF.9            668      3   0.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,G1124V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.9            668      3   0.4%   1 +[T22I,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.1.377       668    539  80.7%   0 +[I233V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.377       668     86  12.9%   1 +[I233V,T716I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.377       668     13   1.9%   1 +[I233V,G257S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.377       668      4   0.6%   1 +[I233V,V267L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.377       668      3   0.4%   1 +[I233V,T676P]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5.65      667    381  57.1%   0  (consensus)
XBB.1.5.65      667     30   4.5%   2 -[R408S,S477N] 
XBB.1.5.65      667     26   3.9%   1 +[E619Q] 
XBB.1.5.65      667     16   2.4%   1 +[R78M] 
XBB.1.5.65      667     14   2.1%   3 -[R408S,S477N,Q954H] 

BQ.1.28         667    481  72.1%   0 +[H69-,V70-,V213G,Y248S,+248RWMD,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.28         667     86  12.9%   5 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.28         667     11   1.6%   1 +[T19L,H69-,V70-,V213G,Y248S,+248RWMD,G339D,K444T,L452R,F486V]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.28         667      5   0.7%   1 +[H69-,V70-,V213G,Y248S,+248RWMD,G339D,K444T,L452R,F486V,E554Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.28         667      4   0.6%   1 +[H69-,V70-,V213G,Y248S,+248RWMD,G339D,K444T,L452R,F486V,P621S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

C.16            666    240  36.0%   0 +[L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
C.16            666    121  18.2%   1 +[L452R,G769V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
C.16            666     58   8.7%   3 +[L452R,S640F,G769V,K854N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
C.16            666     25   3.8%   1 +[A411S,L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
C.16            666     21   3.2%   1 +[L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,N764K,D796Y,Q954H,N969K] 

B.1.1.432       664    263  39.6%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.432       664     35   5.3%   1 +[A647V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.432       664     28   4.2%   1 +[T618S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.432       664     25   3.8%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.432       664     24   3.6%   1 +[A1020S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.524         664    513  77.3%   0 +[A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.524         664     41   6.2%   1 +[R214L,A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.524         664     10   1.5%   1 +[L452M,A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.524         664      6   0.9%   3 +[R214L,E654A,A701V,T791I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.524         664      5   0.8%   2 +[R214L,A701V,L938F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.36.22       664    327  49.2%   0 +[G181V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.36.22       664    176  26.5%   1 +[L18F,G181V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.22       664     57   8.6%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.22       664     21   3.2%   2 +[L18F,G181V,A892S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.22       664      6   0.9%   2 +[V1133I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.1.1.9        661    553  83.7%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.1.9        661     58   8.8%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.9        661     11   1.7%   1 +[A67V,H69-,V70-,T95I,F140L,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.9        661      3   0.5%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.1.9        661      3   0.5%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,R346K,S371L,Q493R,G496S,T547K,Q677K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

C.17            659    260  39.5%   0 +[S12F,L452R,Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
C.17            659     86  13.1%   2 +[Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
C.17            659     40   6.1%   1 +[L452R,Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
C.17            659     16   2.4%   3 +[H49Y,Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
C.17            659     14   2.1%   1 +[S12F,Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.86           658    428  65.0%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,A845S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.86           658    122  18.5%   1 +[T19R,E156G,F157-,R158-,P251L,L452R,P681R,A845S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.86           658     23   3.5%   1 +[T19R,D80G,E156G,F157-,R158-,L452R,P681R,A845S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.86           658     12   1.8%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,A845S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.86           658     10   1.5%   1 +[T19R,E156G,F157-,R158-,L452R,Y660H,P681R,A845S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

P.1.7.1         656    520  79.3%   0 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,N764K,D796Y,Q954H,N969K] (consensus)
P.1.7.1         656     15   2.3%   1 +[L5F,L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,N764K,D796Y,Q954H,N969K] 
P.1.7.1         656     13   2.0%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,E583D,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,N764K,D796Y,Q954H,N969K] 
P.1.7.1         656      9   1.4%   2 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,E583D,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,N764K,D796Y,Q954H,N969K] 
P.1.7.1         656      8   1.2%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,K444N,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,N764K,D796Y,Q954H,N969K] 

AY.134          651    606  93.1%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.134          651      8   1.2%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,L841I,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.134          651      4   0.6%   1 +[L5F,T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.134          651      3   0.5%   1 +[S13I,T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.134          651      3   0.5%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,M1229I]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.160.8       651    561  86.2%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.160.8       651     36   5.5%   1 +[D1084E]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.160.8       651     10   1.5%   1 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.160.8       651     10   1.5%   2 +[P26S,S939F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.160.8       651      5   0.8%   3 +[P26S,E484D,S939F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BE.1.3          650    472  72.6%   0 +[H69-,V70-,M153I,V213G,G339D,L452R,F486V,E1258Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BE.1.3          650     62   9.5%   1 +[H69-,V70-,K147N,M153I,V213G,G339D,L452R,F486V,E1258Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.1.3          650     22   3.4%   1 +[L5F,H69-,V70-,M153I,V213G,G339D,L452R,F486V,E1258Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.1.3          650     11   1.7%   2 +[H69-,V70-,M153I,V213G,G339D,L452R,F486V,E1258Q]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BE.1.3          650      7   1.1%   1 +[H69-,V70-,M153I,V213G,G339D,L452R,F486V,E1258Q]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BN.1.2.1        649    511  78.7%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,T470N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
BN.1.2.1        649      9   1.4%   1 +[L8F,K147E,W152R,F157L,I210V,V213G,G257S,K356T,T470N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.2.1        649      9   1.4%   1 +[K147E,W152R,F157L,N185S,I210V,V213G,G257S,K356T,T470N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.2.1        649      8   1.2%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,T470N,T547K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.2.1        649      6   0.9%   2 +[K147E,W152R,F157L,I210V,V213G,K356T,T470N]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 

CR.1.1          648    519  80.1%   0 +[V62I,H69-,V70-,V213G,G339D,K444R,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
CR.1.1          648     15   2.3%   1 +[V62I,H69-,V70-,V213G,G339D,K444R,L452R,F486V,S940A]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
CR.1.1          648     14   2.2%   1 +[V62I,H69-,V70-,V213G,G339D,T430I,K444R,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
CR.1.1          648      7   1.1%   2 +[V62I,H69-,V70-,F186Y,V213G,G339D,K444R,V445A,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
CR.1.1          648      6   0.9%   1 +[P9L,V62I,H69-,V70-,V213G,G339D,K444R,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

XBB.1.5.23      644    297  46.1%   0  (consensus)
XBB.1.5.23      644     54   8.4%   1 +[H146K]-[H146Q] 
XBB.1.5.23      644     37   5.7%   1 +[H245Y] 
XBB.1.5.23      644     31   4.8%   1 -[R408S] 
XBB.1.5.23      644     21   3.3%   1 +[T19L]-[T19I] 

GR.1            643    445  69.2%   0 +[E281D,V445S]-[V445P] (consensus)
GR.1            643     26   4.0%   1 +[H146K,E281D,V445S]-[H146Q,V445P] 
GR.1            643     19   3.0%   1 +[G75S,E281D,V445S]-[V445P] 
GR.1            643     13   2.0%   1 +[L249F,E281D,V445S]-[V445P] 
GR.1            643     11   1.7%   1 +[N148T,E281D,V445S]-[V445P] 

AY.91           643    198  30.8%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.91           643    158  24.6%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.91           643     57   8.9%   2 +[T19R,E156G,F157-,R158-,G181V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.91           643     28   4.4%   1 +[T19R,E156G,F157-,R158-,G181V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.91           643     20   3.1%   2 +[T19R,G75V,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.105          641    331  51.6%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.105          641    111  17.3%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.105          641     44   6.9%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,K1191N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.105          641     11   1.7%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,P812S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.105          641      9   1.4%   1 +[T19R,T95I,E156G,F157-,R158-,R214L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.7.14.5       641    493  76.9%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,C1243F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.7.14.5       641     23   3.6%   1 +[H69-,V70-,V213G,R214L,G339D,L452R,F486V,C1243F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.14.5       641      6   0.9%   1 +[H69-,V70-,E96A,V213G,G339D,L452R,F486V,C1243F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.14.5       641      5   0.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,C1243F,G1267R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.7.14.5       641      4   0.6%   2 +[H69-,V70-,K182N,V213G,G339D,R346I,L452R,F486V,C1243F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.8           639    387  60.6%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.8           639    154  24.1%   3 +[A262S,Q314K,F486L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.8           639     15   2.3%   1 +[T716I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.8           639     13   2.0%   1 +[V367F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.8           639      9   1.4%   1 +[A262S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.2.58       639    504  78.9%   0 +[H69-,V70-,V213G,G339D,R346S,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.58       639     27   4.2%   1 +[H69-,V70-,V213G,G339D,R346S,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.58       639     14   2.2%   1 +[T29I,H69-,V70-,V213G,G339D,R346S,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.58       639     10   1.6%   1 +[H69-,V70-,V213G,G339D,R346S,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.58       639      9   1.4%   1 +[H69-,V70-,V213G,G339D,R346S,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 

BA.2.3.16       638    366  57.4%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.3.16       638     88  13.8%   1 +[V213G,G339D,Q493R]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.16       638     88  13.8%   3 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S373P,S375F,T376A,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.16       638      8   1.3%   2 +[V213G,G339D,Q493R,G1251A]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.3.16       638      6   0.9%   1 +[V213G,G339D,K444R,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.177.62      636    557  87.6%   0 +[L18F,T51I,A222V,D936Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.62      636     16   2.5%   1 +[L18F,T51I,A222V,D936Y,H1101Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.62      636     10   1.6%   1 +[L5F,L18F,T51I,A222V,D936Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.62      636      7   1.1%   1 +[L18F,T51I,T76I,A222V,D936Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.62      636      6   0.9%   1 +[L18F,T51I,A222V,P337S,D936Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BN.1.3.7        636    388  61.0%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
BN.1.3.7        636     41   6.4%   1 +[G75S,K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.3.7        636     27   4.2%   3 +[G75S,H146L,K147E,W152R,F157L,I210V,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,G252V,L368I,V445P,F486P] 
BN.1.3.7        636     25   3.9%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,V622F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.3.7        636     16   2.5%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,T478R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,T478K,F486P] 

FL.18           635    407  64.1%   0  (consensus)
FL.18           635     22   3.5%   1 +[R78M] 
FL.18           635     20   3.1%   1 -[K417N] 
FL.18           635     14   2.2%   1 -[T478K] 
FL.18           635      9   1.4%   1 +[H146K]-[H146Q] 

JD.2            634    486  76.7%   0  (consensus)
JD.2            634     18   2.8%   1 -[R408S] 
JD.2            634     12   1.9%   2 -[R346T,K417N] 
JD.2            634      7   1.1%   1 +[H146K]-[H146Q] 
JD.2            634      7   1.1%   1 -[R346T] 

AY.58           631    450  71.3%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.58           631     54   8.6%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.58           631     27   4.3%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.58           631     17   2.7%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P479S,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.58           631      8   1.3%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

CN.1            631    355  56.3%   0 +[H69-,V70-,V213G,G339D,N450D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
CN.1            631    164  26.0%   1 +[H69-,V70-,V213G,G339D,N450D,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
CN.1            631     12   1.9%   1 +[H69-,V70-,V213G,G252S,G339D,N450D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
CN.1            631     11   1.7%   1 +[H69-,V70-,V213G,G339D,N450D,L452R,F486V,V1060I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
CN.1            631      5   0.8%   1 +[H69-,V70-,V213G,G339D,N450D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

BN.1.9          630    485  77.0%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
BN.1.9          630     16   2.5%   3 +[K147E,W152R,E156-,F157-,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,R346T,L368I,V445P,F486P] 
BN.1.9          630     12   1.9%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,R408S,V445P,F486P] 
BN.1.9          630      5   0.8%   1 +[K147E,W152R,F157L,I210V,V213G,H245Y,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.9          630      5   0.8%   1 +[V70L,K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 

FD.4            629    362  57.6%   0  (consensus)
FD.4            629     44   7.0%   2 +[H146K,K182R]-[H146Q] 
FD.4            629     21   3.3%   1 +[P521S] 
FD.4            629     18   2.9%   2 +[T478R,T883I]-[T478K] 
FD.4            629     12   1.9%   3 +[H146K,K182R,T747I]-[H146Q] 

GK.2.1          628    416  66.2%   0 +[L455F,F456L,V511I] (consensus)
GK.2.1          628     21   3.3%   2 +[Q14R,L455F,F456L,V511I,V1264L] 
GK.2.1          628     17   2.7%   1 +[K304N,L455F,F456L,V511I] 
GK.2.1          628      8   1.3%   1 +[L455F,F456L,V511I]-[K417N] 
GK.2.1          628      8   1.3%   1 +[L455F,F456L,V511I,Q1201K] 

B.1.1.294       628    286  45.5%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.294       628     65  10.4%   2 +[T95I,A688S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.294       628     40   6.4%   1 +[E96D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.294       628     13   2.1%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.294       628     10   1.6%   2 +[E96D,L948I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.1.42       627    454  72.4%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,S704L]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.42       627     34   5.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,S704L,T747I]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.42       627     14   2.2%   1 +[H69-,V70-,V213G,H245Y,G339D,K444T,L452R,F486V,S704L]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.42       627     10   1.6%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,S704L]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,R408S,V445P,G446S,F486P,F490S] 
BQ.1.1.42       627      7   1.1%   1 +[L5F,H69-,V70-,V213G,G339D,K444T,L452R,F486V,S704L]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BA.2.33         627    546  87.1%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.33         627     25   4.0%   1 +[H66N,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.33         627     11   1.8%   1 +[V213G,G339D,Q493R,I1114T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.33         627      7   1.1%   1 +[V213G,R214L,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.33         627      6   1.0%   1 +[V213G,G339D,Q493R,T791I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

EG.1.3          626    421  67.3%   0 +[Q613H] (consensus)
EG.1.3          626     14   2.2%   1 +[D253Y,Q613H] 
EG.1.3          626      8   1.3%   1 +[H146K,Q613H]-[H146Q] 
EG.1.3          626      6   1.0%   1 +[Q613H]-[R408S] 
EG.1.3          626      6   1.0%   1 +[Y451H,Q613H] 

AY.9.2.2        624    457  73.2%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,Q675K,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.9.2.2        624     40   6.4%   1 +[T19R,V70L,E156G,F157-,R158-,A222V,L452R,Q675K,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.9.2.2        624     16   2.6%   2 +[T19R,E156G,F157-,R158-,A222V,L452R,Q675K,P681R,D950N,H1101Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.9.2.2        624     16   2.6%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,Q675K,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.9.2.2        624     14   2.2%   1 +[T19R,E156G,F157-,R158-,G181V,A222V,L452R,Q675K,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBC.1           623    435  69.8%   0 +[P25S,E156G,F157-,R158-,P209L,L212S,D215H,A222V,A243-,L244-,S256L,L452M,N703I]-[L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,N460K,F490S] (consensus)
XBC.1           623     24   3.9%   1 +[P25S,E156G,F157-,R158-,P209L,L212S,D215H,A222V,A243-,L244-,S256L,L452M,N703I,Q1208H]-[L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,N460K,F490S] 
XBC.1           623     23   3.7%   1 +[P25S,A67S,E156G,F157-,R158-,P209L,L212S,D215H,A222V,A243-,L244-,S256L,L452M,N703I]-[L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,N460K,F490S] 
XBC.1           623     12   1.9%   2 +[P25S,A67S,E156G,F157-,R158-,P209L,L212S,D215H,A222V,A243-,L244-,L452M,N703I]-[L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,N460K,F490S] 
XBC.1           623     10   1.6%   1 +[P25S,E156G,F157-,R158-,P209L,L212S,D215H,A222V,A243-,L244-,L452M,N703I]-[L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,N460K,F490S] 

AY.28           621    458  73.8%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,A701S,D950N,A1078S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.28           621      7   1.1%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,E484Q,P681R,A701S,D950N,A1078S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.28           621      7   1.1%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,Q613H,P681R,A701S,D950N,A1078S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.28           621      5   0.8%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,T573I,P681R,A701S,D950N,A1078S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.28           621      4   0.6%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,A701S,D950N,A1078S,Q1208H]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BF.18           620    505  81.5%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.18           620     21   3.4%   1 +[H69-,V70-,V213G,G339D,R346S,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.18           620     16   2.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,D1199H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.18           620     11   1.8%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.18           620      4   0.6%   1 +[H69-,V70-,V213G,G339D,V445A,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.576         619    522  84.3%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.576         619     15   2.4%   1 +[G75V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.576         619      6   1.0%   2 +[T572I,K1181R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.576         619      5   0.8%   1 +[H1101Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.576         619      4   0.6%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.43.9         618    326  52.8%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.43.9         618    151  24.4%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.9         618     42   6.8%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,N960K]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.9         618     16   2.6%   1 +[T19R,M153I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.43.9         618      6   1.0%   1 +[T19R,E156G,F157-,R158-,S221L,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.10           617    468  75.9%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.10           617     43   7.0%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,T1027I]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.10           617     17   2.8%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,H1101Y]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.10           617     11   1.8%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.10           617      9   1.5%   2 +[T19R,I105V,E156G,F157-,R158-,A222V,A243S,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

P.1.13          610    546  89.5%   0 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
P.1.13          610      5   0.8%   1 +[L18F,T20N,P26S,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.13          610      5   0.8%   1 +[L18F,T20N,P25L,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.13          610      4   0.7%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F,G1223S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 
P.1.13          610      3   0.5%   1 +[L18F,T20N,P26S,D138Y,R190S,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.280         610    497  81.5%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.280         610      9   1.5%   1 +[A262S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.280         610      8   1.3%   1 +[G1219C]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.280         610      7   1.1%   1 +[E406Q]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.280         610      6   1.0%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.8.2        609    448  73.6%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,A688V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.8.2        609     90  14.8%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,A688V,V1164I]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
BQ.1.8.2        609      8   1.3%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,A688V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,F486P,F490S] 
BQ.1.8.2        609      5   0.8%   2 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E619D,A688V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S,P681H] 
BQ.1.8.2        609      4   0.7%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,E619D,A688V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

XBB.1.17.1      608    271  44.6%   0 +[D215H] (consensus)
XBB.1.17.1      608     25   4.1%   1 +[H146K,D215H]-[H146Q] 
XBB.1.17.1      608     21   3.5%   1 +[D215H,T284I] 
XBB.1.17.1      608     14   2.3%  10 +[N148T,M177K,D178-,L179-,K182-,Q183-,G184-,D215H,Q218R,S494P,P521S]-[Q183E] 
XBB.1.17.1      608     13   2.1%   1 +[D215H,P812S] 

AY.32           608    303  49.8%   0 +[T19R,E156G,F157-,R158-,L452R,T572I,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.32           608     40   6.6%   1 +[T19R,E156G,F157-,R158-,T250I,L452R,T572I,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.32           608     30   4.9%   2 +[T19R,Y28F,E156G,F157-,R158-,L216F,L452R,T572I,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.32           608     27   4.4%   2 +[T19R,E156G,F157-,R158-,L452R,T572I,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.32           608     24   3.9%   1 +[T19R,E156G,F157-,R158-,L452R,T572I,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.361         607    493  81.2%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.361         607     35   5.8%   1 +[D1163G]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.361         607      9   1.5%   1 +[P499S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.361         607      6   1.0%   1 +[A626S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.361         607      4   0.7%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

CK.1.4          606    503  83.0%   0 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
CK.1.4          606     14   2.3%   1 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,F486P,F490S] 
CK.1.4          606     13   2.1%   1 +[H69-,V70-,V213G,T307I,G339D,K444N,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
CK.1.4          606      6   1.0%   1 +[H69-,V70-,V213G,G339D,S359N,K444N,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
CK.1.4          606      5   0.8%   1 +[L5F,H69-,V70-,V213G,G339D,K444N,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 

BA.1.17.1       605    557  92.1%   0 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] (consensus)
BA.1.17.1       605      6   1.0%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,A260T,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.17.1       605      6   1.0%   1 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,R765L,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.17.1       605      5   0.8%   3 +[A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 
BA.1.17.1       605      4   0.7%   1 +[L5F,A67V,H69-,V70-,T95I,V143-,Y145-,N211-,L212I,+214EPE,G339D,S371L,Q493R,G496S,T547K,N856K,L981F]-[T19I,L24-,P25-,P26-,A27S,V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,T376A,D405N,R408S,V445P,N460K,F486P,F490S] 

BQ.1.1.11       605    345  57.0%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,S494P]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.11       605     63  10.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,S494P,Q1208H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.11       605     56   9.3%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,S494P]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.11       605     12   2.0%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,S494P]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.11       605     10   1.7%   2 +[H69-,V70-,V213G,H245Y,G339D,K444T,L452R,F486V,S494P]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

FL.12           604    354  58.6%   0  (consensus)
FL.12           604    119  19.7%   1 +[D1084E] 
FL.12           604     11   1.8%   1 +[H146K]-[H146Q] 
FL.12           604      7   1.2%   1 +[G1085R] 
FL.12           604      7   1.2%   1 -[K417N] 

B.1.1.192       602    295  49.0%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.192       602    192  31.9%   1 +[D138H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.192       602     36   6.0%   1 +[F157S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.192       602     10   1.7%   2 +[F157S,T678A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.192       602      5   0.8%   2 +[D138H,E583D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

FL.4.5          601    371  61.7%   0  (consensus)
FL.4.5          601     24   4.0%   1 +[G181E] 
FL.4.5          601     15   2.5%   1 +[V952I] 
FL.4.5          601     14   2.3%   2 +[R190S,P521S] 
FL.4.5          601     14   2.3%   1 +[N856S] 

B.1.428         601    408  67.9%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.428         601     45   7.5%   1 +[D138Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.428         601     35   5.8%   1 +[N481K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.428         601     10   1.7%   2 +[D138Y,P812S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.428         601      9   1.5%   1 +[K97E]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.54         599    445  74.3%   0 +[V213G,Y248S,G339D,Q493R,E1202Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.54         599     39   6.5%   1 +[V213G,Y248S,G339D,Q493R,E1202Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.2.54         599     29   4.8%   1 +[V213G,Y248S,G339D,Q493R,E1202Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.54         599     15   2.5%   1 +[V213G,Y248S,G339D,Q493R,E1202Q,V1228L]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.54         599     11   1.8%   1 +[V213G,Y248S,G339D,Q493R,E1202Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S,P681H] 

XBB.1.5.62      598    329  55.0%   0  (consensus)
XBB.1.5.62      598     20   3.3%   1 +[H1101Y] 
XBB.1.5.62      598     16   2.7%   1 +[H146K]-[H146Q] 
XBB.1.5.62      598     14   2.3%   1 +[E583Q] 
XBB.1.5.62      598     12   2.0%   1 +[W152R] 

AY.4.12         598    518  86.6%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N,P1162S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.4.12         598     27   4.5%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,S680F,P681R,D950N,P1162S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.12         598     16   2.7%   1 +[T19R,T95I,E156G,F157-,R158-,V193L,L452R,P681R,D950N,P1162S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.12         598      5   0.8%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,T676I,P681R,D950N,P1162S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.4.12         598      3   0.5%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,I896T,D950N,P1162S]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.177.20      598    556  93.0%   0 +[A222V,E583D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.20      598     10   1.7%   1 +[L141V,A222V,E583D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.20      598      6   1.0%   1 +[M177I,A222V,E583D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.20      598      5   0.8%   1 +[L5F,A222V,E583D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.20      598      3   0.5%   1 +[A222V,E583D,P1263S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BM.1.1          597    357  59.8%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
BM.1.1          597     26   4.4%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,F486S]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BM.1.1          597     24   4.0%   1 +[L5F,K147E,W152R,F157L,I210V,V213G,G257S,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BM.1.1          597     17   2.8%   1 +[K147E,W152R,F157L,N185S,I210V,V213G,G257S,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BM.1.1          597     12   2.0%   4 +[K147E,W152R,F157L,I210V,V213G,G257S,F486S]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

BE.4.1          595    364  61.2%   0 +[H69-,V70-,P209L,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BE.4.1          595     55   9.2%   1 +[H69-,V70-,G181V,P209L,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.4.1          595     14   2.4%   1 +[H69-,V70-,F135I,P209L,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.4.1          595     14   2.4%   1 +[H69-,V70-,Q183L,P209L,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BE.4.1          595     13   2.2%   1 +[H69-,V70-,P209L,V213G,G339D,V445A,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

B.1.177.33      595    380  63.9%   0 +[A222V,G639S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.33      595     69  11.6%   1 +[A222V,G639S,A672V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.33      595     38   6.4%   1 +[A222V,G639S,V1264L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.33      595     10   1.7%   1 +[A222V,G639S,Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.33      595      6   1.0%   1 +[L5F,A222V,G639S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.87           594    523  88.0%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.87           594     12   2.0%   1 +[L5F,T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.87           594      8   1.3%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,K1073N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.87           594      5   0.8%   3 +[T19R,E156G,F157-,R158-,L452R,N679T,S680R,P681-,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.87           594      4   0.7%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D936Y,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.160.30      594    435  73.2%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.160.30      594     46   7.7%   1 +[K1191N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.160.30      594     15   2.5%   2 +[A879V,K1191N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.160.30      594     13   2.2%   1 +[S494P]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.160.30      594     10   1.7%   1 +[K558N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BQ.1.1.17       594    446  75.1%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.17       594     26   4.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.17       594     17   2.9%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,S940F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.17       594      6   1.0%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,A688D]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.17       594      5   0.8%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,K417N,V445P,G446S,F486P,F490S] 

BA.2.39         592    540  91.2%   0 +[V213G,G339D,Q493R,L858I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.39         592      8   1.4%   1 +[V213G,G339D,Q493R,L858I,G1219V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.39         592      6   1.0%   1 +[H49Y,V213G,G339D,Q493R,L858I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.39         592      5   0.8%   1 +[V213G,G339D,Q493R,L858I,D950N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.39         592      4   0.7%   1 +[V213G,G339D,Q493R,L858I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 

B.1.177.83      592    259  43.8%   0 +[A222V,A262S,P272L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.83      592    105  17.7%   1 +[A222V,A262S,P272L,L452R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.83      592     72  12.2%   2 +[A222V,A262S,P272L,L452R,V1268I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.83      592     29   4.9%   1 +[A222V,A262S,P272L,L1224F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.83      592      7   1.2%   2 +[A222V,A262S,P272L,L452R,T859I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BN.1.7          591    364  61.6%   0 +[K147E,W152R,F157L,M177T,+209V,N211G,L212-,V213-,G257S,K356T,H1101Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
BN.1.7          591     81  13.7%   1 +[V62I,K147E,W152R,F157L,M177T,+209V,N211G,L212-,V213-,G257S,K356T,H1101Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.7          591     45   7.6%   1 +[K147E,W152R,F157L,M177T,+209V,N211G,L212-,V213-,G257S,K356T,N751D,H1101Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.7          591     14   2.4%   1 +[K147E,W152R,F157L,M177T,G181V,+209V,N211G,L212-,V213-,G257S,K356T,H1101Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.7          591     10   1.7%   1 +[K147E,W152R,F157L,M177T,+209V,N211G,L212-,V213-,G257S,K356T,H1101Y,P1162S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 

BQ.1.1.29       589    333  56.5%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,Q613H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.1.29       589    114  19.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,Q613H]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.29       589     12   2.0%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,Q613H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,K417N,V445P,G446S,F486P,F490S] 
BQ.1.1.29       589     10   1.7%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,S494P,Q613H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.1.29       589      7   1.2%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V,Q613H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,R408S,V445P,G446S,F486P,F490S] 

CH.1.1.26       589    456  77.4%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
CH.1.1.26       589     13   2.2%   5 +[K147E,W152R,F157L,+209V,N211G,L212-,V213-,G257S,K444T,L452R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1.26       589      8   1.4%   4 +[I210V,V213G,G257S,K444T,L452R,F486S]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1.26       589      7   1.2%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S,E1144Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1.26       589      5   0.8%   1 +[K147E,W152R,F157L,M177I,I210V,V213G,G257S,K444T,L452R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

B.1.1.141       585    351  60.0%   0 +[M153T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.141       585     40   6.8%   2 +[M153T,T385I,P681R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.141       585     36   6.2%   1 +[M153T,N540S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.141       585     29   5.0%   1 +[M153T,T385I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.141       585     12   2.1%   1 +[M153T,Y351F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.88           582    184  31.6%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.88           582     86  14.8%   1 +[T19R,E156G,F157-,R158-,L452R,S680F,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.88           582     75  12.9%   2 +[T19R,T124S,E156G,F157-,R158-,L452R,S680F,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.88           582     25   4.3%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.88           582     22   3.8%   2 +[T19R,E156G,F157-,R158-,Q414R,L452R,S680F,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

FL.8            580    334  57.6%   0  (consensus)
FL.8            580     66  11.4%   1 +[S256L] 
FL.8            580     21   3.6%   1 +[D1084Y] 
FL.8            580     16   2.8%   2 +[S256L,E465D] 
FL.8            580     10   1.7%   1 -[K417N] 

XCH.1           579    389  67.2%   0 +[L455F,F456L,T573I,S704L] (consensus)
XCH.1           579     36   6.2%   1 +[L455F,F456L,T573I,Q677H,S704L] 
XCH.1           579     13   2.2%   1 +[L455F,F456L,T478R,T573I,S704L]-[T478K] 
XCH.1           579     12   2.1%   1 +[H146K,L455F,F456L,T573I,S704L]-[H146Q] 
XCH.1           579      9   1.6%   2 +[A262D,L455F,F456L,A475V,T573I,S704L] 

BQ.1.22         579    264  45.6%   0 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] (consensus)
BQ.1.22         579     72  12.4%   1 +[H69-,V70-,V213G,G339D,K444T,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.22         579     58  10.0%   1 +[H69-,V70-,F157L,V213G,G339D,K444T,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.22         579     31   5.4%   2 +[H69-,V70-,F157L,V213G,G339D,K444T,L452R,F486V,V608I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 
BQ.1.22         579      8   1.4%   3 +[H69-,V70-,F157L,V213G,T307I,G339D,K444T,L452R,F486V,Q1201K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,F486P,F490S] 

BA.4.1.4        579    449  77.5%   0 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V,C1235F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.4.1.4        579     27   4.7%   1 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V,C1235F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.4.1.4        579     19   3.3%   1 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V,C1235F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BA.4.1.4        579     15   2.6%   1 +[V3G,H69-,V70-,V213G,G339D,L452R,F486V,I934V,C1235F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.4.1.4        579     11   1.9%   1 +[V3G,H69-,V70-,A93S,V213G,G339D,L452R,F486V,C1235F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BF.24           579    483  83.4%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.24           579     18   3.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BF.24           579     14   2.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.24           579      8   1.4%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A1020S]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.24           579      5   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,A1020S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,N460K,F486P,F490S] 

FL.1.5.2        578    405  70.1%   0 +[F456L,N481K,F490P,P681R,A701V]-[F490S,P681H] (consensus)
FL.1.5.2        578     51   8.8%   1 +[F456L,N481K,P681R,A701V]-[P681H] 
FL.1.5.2        578     24   4.2%   1 +[F456L,N481K,F490P,P681R,A701V,V1228L]-[F490S,P681H] 
FL.1.5.2        578     14   2.4%   3 +[V83T,K356T,F456L,N481K,F490P,T572I,P681R,A701V]-[V83A,F490S,P681H] 
FL.1.5.2        578      5   0.9%   1 +[D138E,F456L,N481K,F490P,P681R,A701V]-[F490S,P681H] 

B.1.177.19      578    550  95.2%   0 +[A222V,E583D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.19      578      4   0.7%   1 +[L5F,A222V,E583D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.19      578      3   0.5%   1 +[A222V,E583D,T1027I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.19      578      3   0.5%   1 +[A222V,E583D,P809S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.19      578      2   0.3%   1 +[A222V,E583D,A684V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.5.1.9        577    475  82.3%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.1.9        577     36   6.2%   2 +[F32L,H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.9        577     10   1.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.9        577      8   1.4%   2 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.1.9        577      4   0.7%   1 +[H69-,V70-,M153I,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.2.9.2        577    457  79.2%   0 +[V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.9.2        577     33   5.7%   2 +[H69-,V70-,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.9.2        577     29   5.0%   1 +[L179P,V213G,G339D,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.9.2        577      7   1.2%   1 +[V213G,G339D,Q493R,I1210V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.9.2        577      6   1.0%   1 +[V213G,G339D,Q493R,E1144Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

A.27            576    317  55.0%   0 +[L18F,L452R,A653V,G1219V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,D614G,N679K,P681H,N764K,Q954H,N969K] (consensus)
A.27            576     79  13.7%   1 +[L18F,L452R,A653V,Q677H,G1219V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,D614G,N679K,P681H,N764K,Q954H,N969K] 
A.27            576     26   4.5%   1 +[L18F,H49Y,L452R,A653V,G1219V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,D614G,N679K,P681H,N764K,Q954H,N969K] 
A.27            576     16   2.8%   2 +[L18F,L452R,A653V,Q677H,K1191N,G1219V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,D614G,N679K,P681H,N764K,Q954H,N969K] 
A.27            576     10   1.7%   1 +[L18F,L452R,A653V,G1219V]-[T19I,L24-,P25-,P26-,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,D614G,N679K,P681H,N764K,Q954H,N969K] 

B.1.1.433       576    494  85.8%   0 +[S477R,S673T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.433       576     22   3.8%   1 +[S477R,S673T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.433       576     17   3.0%   1 +[S477R,S673T,V1104L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.433       576      9   1.6%   1 +[S477R,S673T,G946V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.433       576      4   0.7%   1 +[V143F,S477R,S673T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,P681H,N764K,D796Y,Q954H,N969K] 

AY.66           575    417  72.5%   0 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.66           575     52   9.0%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.66           575     10   1.7%   1 +[T19R,E156G,F157-,R158-,A222V,V367I,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.66           575      9   1.6%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,T1231A]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.66           575      7   1.2%   1 +[T19R,E156G,F157-,R158-,A222V,L452R,P681R,D950N,S1242N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

FY.3.2          574    424  73.9%   0 +[Y200C] (consensus)
FY.3.2          574     14   2.4%   1 +[H146K,Y200C]-[H146Q] 
FY.3.2          574      9   1.6%   2 +[H69-,V70-,Y200C] 
FY.3.2          574      6   1.0%   1 +[L5F,Y200C] 
FY.3.2          574      4   0.7%   1 +[Y200C,A522V] 

B.1.324         574    265  46.2%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.324         574    161  28.0%   1 +[V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.324         574     16   2.8%   2 +[I1114L,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.324         574     13   2.3%   1 +[T307I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.324         574      9   1.6%   1 +[M153V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.108          573    147  25.7%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.108          573    143  25.0%   2 +[T19R,T95I,E156G,F157-,R158-,L452R,E484Q,P681R,D950N,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.108          573     69  12.0%   1 +[T19R,T95I,E156G,F157-,R158-,Y248H,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.108          573     22   3.8%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.108          573     16   2.8%   3 +[T19R,T95I,E156G,F157-,R158-,A243V,L452R,E484Q,P681R,D950N,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.362         573    353  61.6%   0 +[L452R,L1063F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.362         573     85  14.8%   2 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.362         573     38   6.6%   3 +[V1228A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.362         573      8   1.4%   3 +[+256S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.362         573      6   1.0%   4 +[L5F,Q675H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.1         571    447  78.3%   0 +[F486S]-[F486P] (consensus)
XBB.1.1         571      7   1.2%   2 +[V1228L]-[F486P] 
XBB.1.1         571      7   1.2%   1 +[F486S,P521T]-[F486P] 
XBB.1.1         571      6   1.1%   1 +[L5F,F486S]-[F486P] 
XBB.1.1         571      5   0.9%   1 +[F486S,E1111Q]-[F486P] 

B.1.160.17      571    465  81.4%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.160.17      571     58  10.2%   1 +[A942T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.160.17      571     18   3.2%   2 +[S373L,A942T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.160.17      571      7   1.2%   1 +[G75R]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.160.17      571      2   0.4%   1 +[R214S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

HK.1            570    153  26.8%   0 +[Q52H,G257V,F456L] (consensus)
HK.1            570     84  14.7%   2 +[Q52H,G257V,T307I,L455F,F456L] 
HK.1            570     55   9.6%   2 +[Q52H,L455F,F456L] 
HK.1            570     40   7.0%   1 +[Q52H,G257V,F456L,P1263L] 
HK.1            570     34   6.0%   1 +[Q52H,G257V,L455F,F456L] 

BA.5.2.4        570    491  86.1%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,T547I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.4        570      9   1.6%   1 +[H69-,V70-,D138N,V213G,G339D,L452R,F486V,T547I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.4        570      5   0.9%   1 +[L5F,H69-,V70-,V213G,G339D,L452R,F486V,T547I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.4        570      5   0.9%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T547I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.4        570      4   0.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,T547I,V622I]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

BA.5.3.4        568    396  69.7%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.3.4        568     44   7.7%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,G769V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.3.4        568     23   4.0%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.5.3.4        568     14   2.5%   1 +[H69-,V70-,Q173H,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.3.4        568      9   1.6%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S,P681H] 

FL.3.1          567    437  77.1%   0  (consensus)
FL.3.1          567      8   1.4%   1 +[S494P] 
FL.3.1          567      8   1.4%   1 +[H245Y] 
FL.3.1          567      7   1.2%   1 +[V1122L] 
FL.3.1          567      5   0.9%   1 +[T883I] 

XBB.9           566    442  78.1%   0 +[F486S]-[G252V,F486P] (consensus)
XBB.9           566     23   4.1%   1 +[F486S]-[G252V,K417N,F486P] 
XBB.9           566     17   3.0%   1 +[H146K,F486S]-[H146Q,G252V,F486P] 
XBB.9           566      8   1.4%   1 +[F486S]-[G252V,L368I,F486P] 
XBB.9           566      8   1.4%   1 +[S254F,F486S]-[G252V,F486P] 

BF.41           565    408  72.2%   0 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BF.41           565     27   4.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BF.41           565     17   3.0%   1 +[H69-,V70-,L176F,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BF.41           565     16   2.8%   1 +[H69-,V70-,V213G,G339D,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,N460K,F486P,F490S] 
BF.41           565     12   2.1%   1 +[H69-,V70-,V213G,G339D,L452R,F486V,H1101Y]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

EG.13           561    337  60.1%   0  (consensus)
EG.13           561     28   5.0%   1 +[A623V] 
EG.13           561     13   2.3%   2 +[L176F,L1244F] 
EG.13           561     12   2.1%   1 +[L858I] 
EG.13           561     12   2.1%   1 +[H146K]-[H146Q] 

B.1.177.9       561    475  84.7%   0 +[D80Y,N164T,A222V,A262S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.9       561     25   4.5%   1 +[D80Y,T95I,N164T,A222V,A262S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.9       561     14   2.5%   1 +[D80Y,N164T,A222V,A262S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.9       561      7   1.2%   1 +[D80Y,N164T,A222V,A262S,I1216V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.9       561      5   0.9%   1 +[D80Y,S98F,N164T,A222V,A262S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.103.2        561    525  93.6%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.103.2        561     11   2.0%   1 +[T19R,E156G,F157-,R158-,E224A,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.103.2        561      5   0.9%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,T1116I]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.103.2        561      3   0.5%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,Q954H,N969K] 
AY.103.2        561      3   0.5%   1 +[T19R,D138Y,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

EG.10.1         560    379  67.7%   0 +[A344T,R403K,S494P,A701V] (consensus)
EG.10.1         560     21   3.8%   1 +[H146K,A344T,R403K,S494P,A701V]-[H146Q] 
EG.10.1         560      7   1.2%   1 +[A344T,S494P,A701V] 
EG.10.1         560      6   1.1%   1 +[A344T,R403K,S494P,A701V,D1260N] 
EG.10.1         560      6   1.1%   1 +[A344T,R403K,S494P,A701V,T961M] 

W.4             560    475  84.8%   0 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
W.4             560     26   4.6%   1 +[A222V,A653V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
W.4             560      8   1.4%   1 +[P9S,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
W.4             560      6   1.1%   1 +[T22I,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
W.4             560      6   1.1%   1 +[A222V,L1063F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BM.4.1.1        560    375  67.0%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
BM.4.1.1        560     30   5.4%   2 +[L5F,K147E,W152R,F157L,G181A,I210V,V213G,G257S,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BM.4.1.1        560      7   1.2%   2 +[K147E,W152R,F157L,I210V,V213G,D215G,G257S,F486S,S494P]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BM.4.1.1        560      7   1.2%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,F486S,S1252F]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
BM.4.1.1        560      6   1.1%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,F486S]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

B.1.177.32      559    458  81.9%   0 +[A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.32      559     11   2.0%   1 +[A222V,A1020S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.32      559      8   1.4%   1 +[W152L,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.32      559      5   0.9%   1 +[A222V,A846V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.32      559      4   0.7%   1 +[A222V,V367F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.9.1        558    476  85.3%   0 +[V213G,G339D,L452M,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.9.1        558     36   6.5%   4 +[V213G,G339D,L452M,Q493R]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.9.1        558      7   1.3%   1 +[V213G,H245N,G339D,L452M,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.9.1        558      4   0.7%   1 +[V213G,G339D,L452M,Q493R]-[T19I,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.9.1        558      3   0.5%   1 +[V213G,G339D,K417I,L452M,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,N460K,F486P,F490S] 

B.1.177.58      558    478  85.7%   0 +[L18F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.58      558     18   3.2%   1 +[L18F,G181V,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.58      558     14   2.5%   1 +[L18F,A222V,A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.58      558     12   2.2%   1 +[L18F,A222V,A771S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.58      558      7   1.3%   1 +[L18F,A222V,T604I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5.47      557    344  61.8%   0  (consensus)
XBB.1.5.47      557     11   2.0%   1 +[H146K]-[H146Q] 
XBB.1.5.47      557      9   1.6%   1 +[H1058Y] 
XBB.1.5.47      557      9   1.6%   1 +[T259I] 
XBB.1.5.47      557      8   1.4%   1 -[K417N] 

B.1.177.5       556    461  82.9%   0 +[L18F,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.5       556     21   3.8%   1 +[L18F,T22I,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.5       556     20   3.6%   1 +[L18F,A222V,S689I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.5       556      6   1.1%   1 +[L18F,G184V,A222V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.5       556      6   1.1%   2 +[L18F,A222V,E484Q,S689I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BA.2.74         554    422  76.2%   0 +[V213G,G339D,L452M,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.2.74         554     16   2.9%   1 +[V213G,G339D,L452M,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,N440K,V445P,G446S,N460K,F486P,F490S] 
BA.2.74         554     16   2.9%   4 +[V213G,G339D,L452M,Q493R]-[L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.74         554      8   1.4%   1 +[L5F,V213G,G339D,L452M,Q493R]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.2.74         554      8   1.4%   1 +[V213G,G339D,L452M,Q493R]-[V83A,H146Q,Q183E,V213E,G252V,G339H,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.104          553    357  64.6%   0 +[T19R,T95I,E156G,F157-,R158-,L452R,T572I,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.104          553     11   2.0%   1 +[T19R,R21I,T95I,E156G,F157-,R158-,L452R,T572I,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.104          553      8   1.4%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,T572I,P681R,A845S,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.104          553      7   1.3%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,T572I,P681R,F888L,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.104          553      6   1.1%   1 +[T19R,T95I,E156G,F157-,R158-,L452R,T572I,P681R,D950N,Q1180K]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.391         552    477  86.4%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.391         552     31   5.6%   1 +[V622F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.391         552      4   0.7%   1 +[E471Q]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.391         552      3   0.5%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.391         552      2   0.4%   1 +[T299A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

AY.83           547    388  70.9%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.83           547    101  18.5%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.83           547      7   1.3%   1 +[T19R,R21I,E156G,F157-,R158-,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.83           547      4   0.7%   2 +[T19R,E156G,F157-,R158-,G181V,L452R,P681R,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.83           547      3   0.5%   2 +[V16F,T19R,E156G,F157-,R158-,L452R,P681R,L938F,D950N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

CH.1.1.10       547    347  63.4%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
CH.1.1.10       547    104  19.0%   1 +[K147E,W152R,F157L,N185D,I210V,V213G,G257S,K444T,L452R,F486S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1.10       547     24   4.4%   2 +[W64R,K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S,P1162S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CH.1.1.10       547     10   1.8%   3 +[K147E,W152R,F157L,I210V,V213G,G257S,K444T,L452R,F486S,T678-,+679K]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S,N679K] 
CH.1.1.10       547      4   0.7%   4 +[W64R,K147E,W152R,F157L,I210V,V213G,+255L,G257-,K444T,L452R,F486S,P1162S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

BA.5.2.53       546    386  70.7%   0 +[H69-,V70-,V213G,G339D,L452R,F486V,A653V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] (consensus)
BA.5.2.53       546     93  17.0%   1 +[H69-,V70-,V213G,G339D,N450D,L452R,F486V,A653V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.53       546     13   2.4%   1 +[H69-,V70-,V213G,L242F,G339D,L452R,F486V,A653V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.53       546      6   1.1%   3 +[H69-,V70-,V213G,G339D,V445F,N450D,L452R,F486V,T547K,A653V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 
BA.5.2.53       546      5   0.9%   1 +[H69-,V70-,V213G,S247N,G339D,L452R,F486V,A653V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,N460K,F486P,F490S] 

AY.52           545    363  66.6%   0 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,L1141W]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
AY.52           545     78  14.3%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,L1141W]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.52           545     10   1.8%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,A684S,D950N,L1141W]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.52           545      7   1.3%   2 +[T19R,E156G,F157-,R158-,L452R,P681R,L1141W]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
AY.52           545      6   1.1%   1 +[T19R,E156G,F157-,R158-,L452R,P681R,D950N,L1141W,K1181N]-[T19I,L24-,P25-,P26-,A27S,V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

P.1.6           544    446  82.0%   0 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,N764K,D796Y,Q954H,N969K] (consensus)
P.1.6           544     25   4.6%   1 +[L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,N764K,D796Y,Q954H,N969K] 
P.1.6           544     15   2.8%   1 +[L5F,L18F,T20N,P26S,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,N764K,D796Y,Q954H,N969K] 
P.1.6           544     13   2.4%   1 +[L18F,T20N,P26S,A27T,D138Y,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,N764K,D796Y,Q954H,N969K] 
P.1.6           544      9   1.7%   4 +[L18F,T20N,P26S,D138Y,L141F,G142-,V143-,R190S,K417T,E484K,T1027I,V1176F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,N679K,N764K,D796Y,Q954H,N969K] 

B.1.1.269       544    473  86.9%   0 +[D1084Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.1.269       544     15   2.8%   1 +[T95I,D1084Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.269       544      9   1.7%   1 +[L5F,D1084Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.269       544      4   0.7%   1 +[D936Y,D1084Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.1.269       544      3   0.6%   1 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

BN.1.3.2        543    401  73.8%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,V445A]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
BN.1.3.2        543     18   3.3%   4 +[I210V,V213G,G257S,K356T,V445A]-[V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.3.2        543     15   2.8%   1 +[K147E,W152R,F157L,I210V,V213G,K356T,V445A]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.3.2        543     11   2.0%   1 +[K147E,W152R,F157L,I210A,V213G,G257S,K356T,V445A]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.3.2        543      9   1.7%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,V445A,N703S]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 

B.1.351.3       541    210  38.8%   0 +[L18F,A67V,D80A,D215G,L242-,A243-,L244-,E484K,A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.351.3       541    208  38.4%   1 +[L18F,D80A,D215G,L242-,A243-,L244-,E484K,A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.351.3       541      9   1.7%   4 +[L18F,D80A,D215G,L242-,A243-,L244-,R246-,S247-,Y248-,E484K,A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.351.3       541      7   1.3%   4 +[L18F,D80A,D215G,E484K,A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.351.3       541      6   1.1%   2 +[L18F,D80A,D138N,D215G,L242-,A243-,L244-,E484K,A701V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.258.16      540    516  95.6%   0 +[N439K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.258.16      540      4   0.7%   1 +[S112P,N439K]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.258.16      540      3   0.6%   1 +[N439K,I472V]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.258.16      540      2   0.4%   1 +[N439K,Q677H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.258.16      540      1   0.2%   1 +[N439K,T747I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.1.466         538    210  39.0%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.466         538     71  13.2%   1 +[S12F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.466         538     11   2.0%   2 +[S12F,Q675H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.466         538      9   1.7%   1 +[Q675H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.466         538      8   1.5%   1 +[L18F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

L.1             538    509  94.6%   0 +[M1237T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
L.1             538      7   1.3%   1 +[A262S,M1237T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
L.1             538      5   0.9%   1 +[I1132V,M1237T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
L.1             538      2   0.4%   1 +[P681L,M1237T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
L.1             538      1   0.2%   1 +[P579S,M1237T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

B.3.1           538    498  92.6%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.3.1           538     16   3.0%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.3.1           538     10   1.9%   1 +[V615I]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.3.1           538      2   0.4%   1 +[E96D]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.3.1           538      1   0.2%   1 +[Q1208H]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,D614G,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

DJ.1.1          537    296  55.1%   0 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] (consensus)
DJ.1.1          537     72  13.4%   1 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,V445P,G446S,F486P,F490S] 
DJ.1.1          537     55  10.2%   2 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,F486P,F490S] 
DJ.1.1          537     48   8.9%   1 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,R408S,V445P,G446S,F486P,F490S] 
DJ.1.1          537      4   0.7%   1 +[H69-,V70-,V213G,G339D,K444N,L452R,F486V]-[V83A,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,K417N,V445P,G446S,F486P,F490S] 

B.1.36.38       534    378  70.8%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.36.38       534     77  14.4%   1 +[L5F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.38       534     16   3.0%   1 +[L18F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.38       534     11   2.1%   1 +[P384L]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.36.38       534      5   0.9%   1 +[V1065A]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5.28      532    212  39.8%   0 +[T478R]-[T478K] (consensus)
XBB.1.5.28      532     47   8.8%   1 +[T478R,C1247F]-[T478K] 
XBB.1.5.28      532     28   5.3%   1 +[Q183D,T478R]-[Q183E,T478K] 
XBB.1.5.28      532     21   3.9%   2 +[F157S,G252I,T478R]-[G252V,T478K] 
XBB.1.5.28      532     17   3.2%   2 +[G181A,T478R,E619Q]-[T478K] 

CA.7            531    402  75.7%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,L452R,F486S,D1199N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] (consensus)
CA.7            531     25   4.7%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,L452R,F486S,Q613H,D1199N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CA.7            531     10   1.9%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,L452R,F486S,T747I,D1199N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 
CA.7            531      7   1.3%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,L452R,F486S,D1199N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,R408S,V445P,F486P,F490S] 
CA.7            531      5   0.9%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,L452R,F486S,P621S,D1199N]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P,F490S] 

BN.1.3.12       530    425  80.2%   0 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] (consensus)
BN.1.3.12       530     23   4.3%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,R408S,V445P,F486P] 
BN.1.3.12       530      6   1.1%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,Q675H]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.3.12       530      6   1.1%   1 +[K147E,W152R,F157L,N164S,I210V,V213G,G257S,K356T]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 
BN.1.3.12       530      5   0.9%   1 +[K147E,W152R,F157L,I210V,V213G,G257S,K356T,E471Q]-[V83A,Y144-,H146Q,Q183E,V213E,G252V,L368I,V445P,F486P] 

B.1.127         529    492  93.0%   0 -[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.127         529     17   3.2%   1 +[H146Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.127         529      3   0.6%   2 +[H66Q,H146Y]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.127         529      2   0.4%   1 +[S939F]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.127         529      2   0.4%   1 +[F59S]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 

XBB.1.5.86      528    225  42.6%   0  (consensus)
XBB.1.5.86      528     33   6.2%   1 +[T883I] 
XBB.1.5.86      528     25   4.7%   1 -[R346T] 
XBB.1.5.86      528     24   4.5%   2 -[R346T,K417N] 
XBB.1.5.86      528     22   4.2%   1 +[T676I] 

B.1.177.69      528    433  82.0%   0 +[A222V,S929T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] (consensus)
B.1.177.69      528     15   2.8%   1 +[A222V,G769V,S929T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.69      528     13   2.5%   1 +[A222V,A344S,S929T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,S477N,T478K,E484A,F486P,F490S,Q498R,N501Y,Y505H,H655Y,N679K,P681H,N764K,D796Y,Q954H,N969K] 
B.1.177.69      528     11   2.1%   1 +[A222V,T385I,S929T]-[T19I,L24-,P25-,P26-,A27S,V83A,G142D,Y144-,H146Q,Q183E,V213E,G252V,G339H,R346T,L368I,S371F,S373P,S375F,T376A,D405N,R408S,K417N,N440K,V445P,G446S,N460K,