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AnalyzeAlign

Purpose: Show weblogos, calculate frequency by position, and find variants in an alignment. Explanation.

Input
Genomic region
Positions/range to analyze Total positions ≤ 30, numbers must refer to residues of NC_045512
Positions are coordinates of   sequence
LANL Alignment icon


Sequence filter
Collection date -
Host
Geographic region


minus Logo options
Logo size pixels  
Max no. of logo stacks per line icon
Y-axis units icon
Color scheme icon
  
(example)
  
Draw stacks with largest letters on top
Remove symbols from logo icon

   

minus Other options
Output
Downloadable logo files PDF  EPS  SVG 
Combine logos for separate results into a page
Concatenate PDF or EPS logos as a x matrix   (row x column)
      Orientation:
     
Email results


Related links:

last modified: Tue Mar 16 17:04 2021



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